RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 MAP2K5Q13163 448 aa16.59■□□□□ 0.25
SEC13-205ENST00000397101 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
SEC13-205ENST00000397101 C12orf42Q96LP6 360 aa16.59■□□□□ 0.25
SEC13-205ENST00000397101 LBHD1Q9BQE6 289 aaPredicted RBP16.59■□□□□ 0.25
SEC13-205ENST00000397101 NOL10Q9BSC4 688 aaKnown RBP16.59■□□□□ 0.25
SEC13-205ENST00000397101 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
SEC13-205ENST00000397101 RAI14Q9P0K7 980 aa16.59■□□□□ 0.25
SEC13-205ENST00000397101 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
SEC13-205ENST00000397101 RABGAP1Q9Y3P9 1069 aa16.59■□□□□ 0.25
SEC13-205ENST00000397101 GLRX3O76003 335 aaKnown RBP16.58■□□□□ 0.24
SEC13-205ENST00000397101 HOXC6P09630 235 aa16.58■□□□□ 0.24
SEC13-205ENST00000397101 UQCRFS1P1P0C7P4 283 aa16.58■□□□□ 0.24
SEC13-205ENST00000397101 CCNA1P78396 465 aa16.58■□□□□ 0.24
SEC13-205ENST00000397101 CCL14Q16627 93 aa16.58■□□□□ 0.24
SEC13-205ENST00000397101 USP17L2Q6R6M4 530 aa16.58■□□□□ 0.24
SEC13-205ENST00000397101 TBC1D9Q6ZT07 1266 aa16.58■□□□□ 0.24
SEC13-205ENST00000397101 SH3RF3Q8TEJ3 882 aaPredicted RBP16.58■□□□□ 0.24
SEC13-205ENST00000397101 LPAR1Q92633 364 aa16.58■□□□□ 0.24
SEC13-205ENST00000397101 EDC3Q96F86 508 aaKnown RBP16.58■□□□□ 0.24
SEC13-205ENST00000397101 ZBTB21Q9ULJ3 1066 aa16.58■□□□□ 0.24
SEC13-205ENST00000397101 DNM1LO00429 736 aa16.57■□□□□ 0.24
SEC13-205ENST00000397101 JAG1P78504 1218 aa16.57■□□□□ 0.24
SEC13-205ENST00000397101 ZNF697Q5TEC3 545 aa16.57■□□□□ 0.24
SEC13-205ENST00000397101 MFSD14CQ5VZR4 134 aa16.57■□□□□ 0.24
SEC13-205ENST00000397101 POTEEQ6S8J3 1075 aa16.57■□□□□ 0.24
SEC13-205ENST00000397101 PI16Q6UXB8 463 aa16.57■□□□□ 0.24
SEC13-205ENST00000397101 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
SEC13-205ENST00000397101 NEUROD6Q96NK8 337 aa16.57■□□□□ 0.24
SEC13-205ENST00000397101 DCTPP1Q9H773 170 aa16.57■□□□□ 0.24
SEC13-205ENST00000397101 EMILIN3Q9NT22 766 aa16.57■□□□□ 0.24
SEC13-205ENST00000397101 LRP2BPQ9P2M1 347 aa16.57■□□□□ 0.24
SEC13-205ENST00000397101 SIPA1L1O43166 1804 aa16.56■□□□□ 0.24
SEC13-205ENST00000397101 FLT1P17948 1338 aa16.56■□□□□ 0.24
SEC13-205ENST00000397101 PEX10O60683 326 aa16.56■□□□□ 0.24
SEC13-205ENST00000397101 MCAMP43121 646 aa16.56■□□□□ 0.24
SEC13-205ENST00000397101 GORABQ5T7V8 394 aa16.56■□□□□ 0.24
SEC13-205ENST00000397101 ANKRD45Q5TZF3 282 aa16.56■□□□□ 0.24
SEC13-205ENST00000397101 SENP6Q9GZR1 1112 aaPredicted RBP16.56■□□□□ 0.24
SEC13-205ENST00000397101 DDX20Q9UHI6 824 aaKnown RBP16.56■□□□□ 0.24
SEC13-205ENST00000397101 SLC15A5A6NIM6 579 aa16.55■□□□□ 0.24
SEC13-205ENST00000397101 RAB11FIP3O75154 756 aa16.55■□□□□ 0.24
SEC13-205ENST00000397101 IGHA2P01877 340 aa16.55■□□□□ 0.24
SEC13-205ENST00000397101 PTPREP23469 700 aa16.55■□□□□ 0.24
SEC13-205ENST00000397101 NAA16Q6N069 864 aaPredicted RBP16.55■□□□□ 0.24
SEC13-205ENST00000397101 ERC1Q8IUD2 1116 aa16.55■□□□□ 0.24
SEC13-205ENST00000397101 CRACR2BQ8N4Y2 399 aaPredicted RBP16.55■□□□□ 0.24
SEC13-205ENST00000397101 TGFBRAP1Q8WUH2 860 aa16.55■□□□□ 0.24
SEC13-205ENST00000397101 PAGR1Q9BTK6 254 aa16.55■□□□□ 0.24
SEC13-205ENST00000397101 TRIM34Q9BYJ4 488 aa16.55■□□□□ 0.24
SEC13-205ENST00000397101 AATFQ9NY61 560 aaKnown RBP eCLIP16.55■□□□□ 0.24
SEC13-205ENST00000397101 PRKAG2Q9UGJ0 569 aa16.55■□□□□ 0.24
SEC13-205ENST00000397101 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.55■□□□□ 0.24
SEC13-205ENST00000397101 MAST2Q6P0Q8 1798 aa16.55■□□□□ 0.24
SEC13-205ENST00000397101 USP17L15C9J2P7 530 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 USP17L13C9JLJ4 530 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 USP17L11C9JVI0 530 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 USP17L18D6R9N7 530 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 USP17L22D6RA61 530 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 USP17L17D6RBQ6 530 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 USP17L19D6RCP7 530 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 USP17L20D6RJB6 530 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 CNMDO75829 334 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 HLA-DOAP06340 250 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 USP14P54578 494 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 USP17L24Q0WX57 530 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 GRB14Q14449 540 aa16.54■□□□□ 0.24
SEC13-205ENST00000397101 CWC22Q9HCG8 908 aaKnown RBP16.54■□□□□ 0.24
SEC13-205ENST00000397101 GDF11O95390 407 aa16.53■□□□□ 0.24
SEC13-205ENST00000397101 TATDN1Q6P1N9 297 aa16.53■□□□□ 0.24
SEC13-205ENST00000397101 CATSPERGQ6ZRH7 1159 aa16.53■□□□□ 0.24
SEC13-205ENST00000397101 CERS3Q8IU89 383 aa16.53■□□□□ 0.24
SEC13-205ENST00000397101 MAPKAPK5Q8IW41 473 aa16.53■□□□□ 0.24
SEC13-205ENST00000397101 SMC5Q8IY18 1101 aa16.53■□□□□ 0.24
SEC13-205ENST00000397101 LRRCC1Q9C099 1032 aa16.53■□□□□ 0.24
SEC13-205ENST00000397101 GPR108Q9NPR9 543 aa16.53■□□□□ 0.24
SEC13-205ENST00000397101 FLRT1Q9NZU1 646 aa16.53■□□□□ 0.24
SEC13-205ENST00000397101 NOP58Q9Y2X3 529 aaKnown RBP16.53■□□□□ 0.24
SEC13-205ENST00000397101 FRMPD3Q5JV73 1810 aa16.52■□□□□ 0.24
SEC13-205ENST00000397101 RTP1P59025 263 aa16.52■□□□□ 0.24
SEC13-205ENST00000397101 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
SEC13-205ENST00000397101 ZNF512BQ96KM6 892 aaPredicted RBP16.52■□□□□ 0.24
SEC13-205ENST00000397101 CDX2Q99626 313 aaPredicted RBP16.52■□□□□ 0.24
SEC13-205ENST00000397101 SEMA6BQ9H3T3 888 aa16.52■□□□□ 0.24
SEC13-205ENST00000397101 PALD1Q9ULE6 856 aa16.52■□□□□ 0.24
SEC13-205ENST00000397101 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
SEC13-205ENST00000397101 SMAD3P84022 425 aaKnown RBP16.51■□□□□ 0.23
SEC13-205ENST00000397101 ATP2B2Q01814 1243 aa16.51■□□□□ 0.23
SEC13-205ENST00000397101 SNX17Q15036 470 aa16.51■□□□□ 0.23
SEC13-205ENST00000397101 SHROOM1Q2M3G4 852 aaPredicted RBP16.51■□□□□ 0.23
SEC13-205ENST00000397101 C1orf53Q5VUE5 145 aa16.51■□□□□ 0.23
SEC13-205ENST00000397101 ARRDC4Q8NCT1 418 aa16.51■□□□□ 0.23
SEC13-205ENST00000397101 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
SEC13-205ENST00000397101 KIAA1683Q9H0B3 1180 aa16.51■□□□□ 0.23
SEC13-205ENST00000397101 EHD4Q9H223 541 aa16.51■□□□□ 0.23
SEC13-205ENST00000397101 IVNS1ABPQ9Y6Y0 642 aa16.51■□□□□ 0.23
SEC13-205ENST00000397101 FOCADQ5VW36 1801 aa16.5■□□□□ 0.23
SEC13-205ENST00000397101 TMEM265A0A087WTH1 108 aa16.5■□□□□ 0.23
SEC13-205ENST00000397101 GH2P01242 217 aa16.5■□□□□ 0.23
SEC13-205ENST00000397101 CYBAP13498 195 aa16.5■□□□□ 0.23
SEC13-205ENST00000397101 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms