RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 CDK5RAP2Q96SN8 1893 aa11.56□□□□□ -0.56
MCF2L-206ENST00000397021 NACAP1Q9BZK3 213 aa11.56□□□□□ -0.56
MCF2L-206ENST00000397021 NAPBQ9H115 298 aa11.56□□□□□ -0.56
MCF2L-206ENST00000397021 ASCC2Q9H1I8 757 aaPredicted RBP11.56□□□□□ -0.56
MCF2L-206ENST00000397021 MKNK2Q9HBH9 465 aa11.56□□□□□ -0.56
MCF2L-206ENST00000397021 HELLSQ9NRZ9 838 aa11.56□□□□□ -0.56
MCF2L-206ENST00000397021 HPS5Q9UPZ3 1129 aa11.56□□□□□ -0.56
MCF2L-206ENST00000397021 SLC45A1Q9Y2W3 748 aa11.56□□□□□ -0.56
MCF2L-206ENST00000397021 CASP8AP2Q9UKL3 1982 aa11.56□□□□□ -0.56
MCF2L-206ENST00000397021 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
MCF2L-206ENST00000397021 NAV1Q8NEY1 1877 aa11.55□□□□□ -0.56
MCF2L-206ENST00000397021 BCRP11274 1271 aa11.55□□□□□ -0.56
MCF2L-206ENST00000397021 RASA1P20936 1047 aa11.55□□□□□ -0.56
MCF2L-206ENST00000397021 OSBPP22059 807 aa11.55□□□□□ -0.56
MCF2L-206ENST00000397021 CTDSPL2Q05D32 466 aa11.55□□□□□ -0.56
MCF2L-206ENST00000397021 PPARAQ07869 468 aa11.55□□□□□ -0.56
MCF2L-206ENST00000397021 PABPC4Q13310 644 aaKnown RBP eCLIP11.55□□□□□ -0.56
MCF2L-206ENST00000397021 KIF22Q14807 665 aa11.55□□□□□ -0.56
MCF2L-206ENST00000397021 TTC22Q5TAA0 569 aa11.55□□□□□ -0.56
MCF2L-206ENST00000397021 CWC27Q6UX04 472 aaKnown RBP11.55□□□□□ -0.56
MCF2L-206ENST00000397021 SIAH1Q8IUQ4 282 aa11.55□□□□□ -0.56
MCF2L-206ENST00000397021 P2RX7Q99572 595 aaKnown RBP11.55□□□□□ -0.56
MCF2L-206ENST00000397021 INCENPQ9NQS7 918 aa11.55□□□□□ -0.56
MCF2L-206ENST00000397021 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
MCF2L-206ENST00000397021 FMNL1O95466 1100 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-206ENST00000397021 EEF2P13639 858 aaKnown RBP11.54□□□□□ -0.56
MCF2L-206ENST00000397021 PSMC4P43686 418 aa11.54□□□□□ -0.56
MCF2L-206ENST00000397021 IRX3P78415 501 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-206ENST00000397021 ICA1Q05084 483 aa11.54□□□□□ -0.56
MCF2L-206ENST00000397021 PKN2Q16513 984 aaKnown RBP11.54□□□□□ -0.56
MCF2L-206ENST00000397021 KIAA1755Q5JYT7 1200 aa11.54□□□□□ -0.56
MCF2L-206ENST00000397021 FBXO46Q6PJ61 603 aaPredicted RBP11.54□□□□□ -0.56
MCF2L-206ENST00000397021 TRIM47Q96LD4 638 aa11.54□□□□□ -0.56
MCF2L-206ENST00000397021 CCDC17Q96LX7 622 aa11.54□□□□□ -0.56
MCF2L-206ENST00000397021 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.54□□□□□ -0.56
MCF2L-206ENST00000397021 KIAA1683Q9H0B3 1180 aa11.54□□□□□ -0.56
MCF2L-206ENST00000397021 DIAPH3Q9NSV4 1193 aa11.54□□□□□ -0.56
MCF2L-206ENST00000397021 PTPN22Q9Y2R2 807 aa11.54□□□□□ -0.56
MCF2L-206ENST00000397021 MYH1P12882 1939 aa11.53□□□□□ -0.56
MCF2L-206ENST00000397021 HSPD1P10809 573 aaKnown RBP11.53□□□□□ -0.56
MCF2L-206ENST00000397021 VCAM1P19320 739 aa11.53□□□□□ -0.56
MCF2L-206ENST00000397021 USP14P54578 494 aa11.53□□□□□ -0.56
MCF2L-206ENST00000397021 FAM47AQ5JRC9 791 aa11.53□□□□□ -0.56
MCF2L-206ENST00000397021 ZNF444Q8N0Y2 327 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-206ENST00000397021 SPICE1Q8N0Z3 855 aa11.53□□□□□ -0.56
MCF2L-206ENST00000397021 C12orf42Q96LP6 360 aa11.53□□□□□ -0.56
MCF2L-206ENST00000397021 RPAP3Q9H6T3 665 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-206ENST00000397021 TACC3Q9Y6A5 838 aa11.53□□□□□ -0.56
MCF2L-206ENST00000397021 PTCH2Q9Y6C5 1203 aa11.53□□□□□ -0.56
MCF2L-206ENST00000397021 LAMB1P07942 1786 aa11.53□□□□□ -0.56
MCF2L-206ENST00000397021 CCDC171Q6TFL3 1326 aa11.53□□□□□ -0.56
MCF2L-206ENST00000397021 ROBO3Q96MS0 1386 aa11.53□□□□□ -0.56
MCF2L-206ENST00000397021 PHIPQ8WWQ0 1821 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 USP17L15C9J2P7 530 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 USP17L13C9JLJ4 530 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 USP17L11C9JVI0 530 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 USP17L18D6R9N7 530 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 USP17L22D6RA61 530 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 USP17L17D6RBQ6 530 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 USP17L19D6RCP7 530 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 USP17L20D6RJB6 530 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 RAD21O60216 631 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 MYCP01106 439 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-206ENST00000397021 FGAP02671 866 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 HOXA7P31268 230 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-206ENST00000397021 HAND2P61296 217 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 HERVK_113P62684 666 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 USP17L24Q0WX57 530 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 POTEEQ6S8J3 1075 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-206ENST00000397021 PAGR1Q9BTK6 254 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 IL25Q9H293 177 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 KANSL2Q9H9L4 492 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 ARHGEF10LQ9HCE6 1279 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 TXNRD2Q9NNW7 524 aa11.52□□□□□ -0.57
MCF2L-206ENST00000397021 SLC3A2P08195 630 aaKnown RBP11.51□□□□□ -0.57
MCF2L-206ENST00000397021 GCLCP48506 637 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-206ENST00000397021 FCGRTP55899 365 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 SOX10P56693 466 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 TFAP4Q01664 338 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 PDE4BQ07343 736 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 ARHGEF6Q15052 776 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 CATSPERGQ6ZRH7 1159 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 CENPQQ7L2Z9 268 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-206ENST00000397021 CHMP4CQ96CF2 233 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 CCDC136Q96JN2 1154 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 TANGO6Q9C0B7 1094 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 VCPKMTQ9H867 229 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 RBPJLQ9UBG7 517 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 TAOK2Q9UL54 1235 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 GABRQQ9UN88 632 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 TMX2Q9Y320 296 aa11.51□□□□□ -0.57
MCF2L-206ENST00000397021 HIP1O00291 1037 aa11.5□□□□□ -0.57
MCF2L-206ENST00000397021 TNPO2O14787 897 aaKnown RBP11.5□□□□□ -0.57
MCF2L-206ENST00000397021 NEFLP07196 543 aa11.5□□□□□ -0.57
MCF2L-206ENST00000397021 TSPY3P0CV98 308 aa11.5□□□□□ -0.57
MCF2L-206ENST00000397021 TSPY8P0CW00 308 aa11.5□□□□□ -0.57
MCF2L-206ENST00000397021 PRKCZQ05513 592 aa11.5□□□□□ -0.57
MCF2L-206ENST00000397021 ALX1Q15699 326 aa11.5□□□□□ -0.57
MCF2L-206ENST00000397021 FAM110CQ1W6H9 321 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms