RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ZCRB1Q8TBF4 217 aaKnown RBP15.43■□□□□ 0.06
COL4A3-202ENST00000396578 SETD1BQ9UPS6 1966 aaKnown RBP15.43■□□□□ 0.06
COL4A3-202ENST00000396578 CARD10Q9BWT7 1032 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 MYO1AQ9UBC5 1043 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 DNM3Q9UQ16 869 aa15.43■□□□□ 0.06
COL4A3-202ENST00000396578 LINS1Q8NG48 757 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 CCDC51Q96ER9 411 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 MED4Q9NPJ6 270 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 TAB2Q9NYJ8 693 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 ADGRF5Q8IZF2 1346 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 ADGRL1O94910 1474 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 LRRD1A4D1F6 860 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 SERPINB6P35237 376 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 MX2P20592 715 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 ACEP12821 1306 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 B4E1Z4 1266 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 CLTAP09496 248 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 RLBP1P12271 317 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 RAD51AP2Q09MP3 1159 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 HSP90AA5PQ58FG0 334 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 MYCT1Q8N699 235 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 PFDN1O60925 122 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 C2CD5Q86YS7 1000 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 TXKP42681 527 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 GOLGA5Q8TBA6 731 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 RIC8AQ9NPQ8 531 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 PEX19P40855 299 aa15.42■□□□□ 0.06
COL4A3-202ENST00000396578 PDCD2Q16342 344 aaPredicted RBP15.42■□□□□ 0.06
COL4A3-202ENST00000396578 MBD4O95243 580 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 CTAGE3PQ8IX95 158 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 ARHGEF10LQ9HCE6 1279 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 BAG5Q9UL15 447 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 KRIT1O00522 736 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 RPAINQ86UA6 219 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 RRAGAQ7L523 313 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 HAUS1Q96CS2 278 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 PRXQ9BXM0 1461 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 TTC6Q86TZ1 520 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 RIOK1Q9BRS2 568 aaKnown RBP15.41■□□□□ 0.06
COL4A3-202ENST00000396578 BCL2L12Q9HB09 334 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 PLCB4Q15147 1175 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 HERC4Q5GLZ8 1057 aaPredicted RBP15.41■□□□□ 0.06
COL4A3-202ENST00000396578 MRPL46Q9H2W6 279 aaKnown RBP15.41■□□□□ 0.06
COL4A3-202ENST00000396578 DENND2AQ9ULE3 1009 aa15.41■□□□□ 0.06
COL4A3-202ENST00000396578 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 THAP12O43422 761 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 P4HA1P13674 534 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 KIF11P52732 1056 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 RASIP1Q5U651 963 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 GDAP1L1Q96MZ0 367 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 TBC1D7Q9P0N9 293 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 ATP1A2P50993 1020 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 KMT5BQ4FZB7 885 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 NCAPH2Q6IBW4 605 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 SPDL1Q96EA4 605 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 EPS15L1Q9UBC2 864 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 PPIP5K1Q6PFW1 1433 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 PHEXP78562 749 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 KRT81Q14533 505 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 NBPF14Q5TI25 921 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 SAP30BPQ9UHR5 308 aaKnown RBP15.4■□□□□ 0.06
COL4A3-202ENST00000396578 GOLGA8QA0A0J9YX86 632 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 GOLGA8OA6NCC3 632 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 EFCAB8A8MWE9 144 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 GOLGA8NF8WBI6 632 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 NOP56O00567 594 aaKnown RBP15.4■□□□□ 0.06
COL4A3-202ENST00000396578 DZIP3Q86Y13 1208 aaKnown RBP15.4■□□□□ 0.06
COL4A3-202ENST00000396578 POLKQ9UBT6 870 aa15.4■□□□□ 0.06
COL4A3-202ENST00000396578 IRS4O14654 1257 aaPredicted RBP15.39■□□□□ 0.05
COL4A3-202ENST00000396578 ZBTB40Q9NUA8 1239 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 KCNK3O14649 394 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 EXOC3O60645 756 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 SNX29Q8TEQ0 813 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 GSTA1P08263 222 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 GSTA2P09210 222 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 YWHAEP62258 255 aaKnown RBP15.39■□□□□ 0.05
COL4A3-202ENST00000396578 MMEL1Q495T6 779 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 EVI5O60447 810 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 BSPRYQ5W0U4 402 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 CFAP61Q8NHU2 1237 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 LZTS2Q9BRK4 669 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 MAEAQ7L5Y9 396 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 BCAS4Q8TDM0 211 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 PRPF6O94906 941 aaKnown RBP15.39■□□□□ 0.05
COL4A3-202ENST00000396578 ADKP55263 362 aaKnown RBP15.39■□□□□ 0.05
COL4A3-202ENST00000396578 SLC39A6Q13433 755 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 LRGUKQ96M69 825 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 ADCY8P40145 1251 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 TPTE2Q6XPS3 522 aa15.39■□□□□ 0.05
COL4A3-202ENST00000396578 CPA1P15085 419 aa15.38■□□□□ 0.05
COL4A3-202ENST00000396578 FAM207AQ9NSI2 230 aaPredicted RBP15.38■□□□□ 0.05
COL4A3-202ENST00000396578 MAP3K5Q99683 1374 aa15.38■□□□□ 0.05
COL4A3-202ENST00000396578 AOX1Q06278 1338 aa15.38■□□□□ 0.05
COL4A3-202ENST00000396578 SPATS2LQ9NUQ6 558 aaKnown RBP15.38■□□□□ 0.05
COL4A3-202ENST00000396578 NLRP7Q8WX94 980 aa15.38■□□□□ 0.05
COL4A3-202ENST00000396578 LSM14BQ9BX40 385 aaKnown RBP15.38■□□□□ 0.05
COL4A3-202ENST00000396578 TRIM35Q9UPQ4 493 aa15.38■□□□□ 0.05
COL4A3-202ENST00000396578 STAT1P42224 750 aa15.38■□□□□ 0.05
COL4A3-202ENST00000396578 CERS3Q8IU89 383 aa15.38■□□□□ 0.05
COL4A3-202ENST00000396578 DRC3Q9H069 523 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms