RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 TFIP11Q9UBB9 837 aaKnown RBP16.74■□□□□ 0.27
RTFDC1-203ENST00000395881 MROH7-TTC4A0A0A0MT08 1334 aa16.74■□□□□ 0.27
RTFDC1-203ENST00000395881 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 F8W031 263 aaPredicted RBP16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 CALM1P0DP23 149 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 CALM2P0DP24 149 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 CALM3P0DP25 149 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 PLCG2P16885 1265 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 PDE4BQ07343 736 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 RTN1Q16799 776 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 MFSD14BQ5SR56 506 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 ZNF654Q8IZM8 581 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 ALG1Q9BT22 464 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 PANK2Q9BZ23 570 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 RBSNQ9H1K0 784 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 TNKSO95271 1327 aa16.73■□□□□ 0.27
RTFDC1-203ENST00000395881 MMP14P50281 582 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 SSRP1Q08945 709 aaKnown RBP16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 GRIK5Q16478 980 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 TRIM22Q8IYM9 498 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 ZBED3Q96IU2 234 aaPredicted RBP16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 CREBZFQ9NS37 354 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 POLR3EQ9NVU0 708 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 GGA3Q9NZ52 723 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 HDAC9Q9UKV0 1011 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 NAV1Q8NEY1 1877 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 GPR75-ASB3A0A0A6YYF3 556 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 TMEM88BA6NKF7 163 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 WNT10BO00744 389 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 DDAH1O94760 285 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 YEATS4O95619 227 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 KIF23Q02241 960 aaPredicted RBP16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 CCDC173Q0VFZ6 552 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 CCDC178Q5BJE1 867 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 ANGEL2Q5VTE6 544 aaKnown RBP16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 CST9Q5W186 159 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 AMOTL1Q8IY63 956 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 FANCBQ8NB91 859 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 PPP1R9BQ96SB3 815 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
RTFDC1-203ENST00000395881 GAKO14976 1311 aa16.71■□□□□ 0.27
RTFDC1-203ENST00000395881 ADM5C9JUS6 153 aa16.71■□□□□ 0.27
RTFDC1-203ENST00000395881 RANBP6O60518 1105 aaKnown RBP16.71■□□□□ 0.27
RTFDC1-203ENST00000395881 TRIM29Q14134 588 aa16.71■□□□□ 0.27
RTFDC1-203ENST00000395881 C12orf60Q5U649 245 aa16.71■□□□□ 0.27
RTFDC1-203ENST00000395881 KRT26Q7Z3Y9 468 aa16.71■□□□□ 0.27
RTFDC1-203ENST00000395881 ENAHQ8N8S7 591 aaPredicted RBP16.71■□□□□ 0.27
RTFDC1-203ENST00000395881 DCPSQ96C86 337 aaKnown RBP16.71■□□□□ 0.27
RTFDC1-203ENST00000395881 PGBD1Q96JS3 809 aa16.71■□□□□ 0.27
RTFDC1-203ENST00000395881 USP28Q96RU2 1077 aa16.71■□□□□ 0.27
RTFDC1-203ENST00000395881 RBM28Q9NW13 759 aaKnown RBP16.71■□□□□ 0.27
RTFDC1-203ENST00000395881 CDK5RAP2Q96SN8 1893 aa16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 DEXIO95424 95 aa16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 UVSSAQ2YD98 709 aa16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 IFIT1BQ5T764 474 aaKnown RBP16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 MYSM1Q5VVJ2 828 aa16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 RBM43Q6ZSC3 357 aaKnown RBP16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 CATIPQ7Z7H3 387 aa16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 RAB11FIP4Q86YS3 637 aa16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 MTMR14Q8NCE2 650 aa16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 KCNG4Q8TDN1 519 aa16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 RNF26Q9BY78 433 aaPredicted RBP16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 MCM9Q9NXL9 1143 aa16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 SCAF8Q9UPN6 1271 aaKnown RBP16.7■□□□□ 0.26
RTFDC1-203ENST00000395881 DDX60LQ5H9U9 1706 aaKnown RBP16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 CYP2D7A0A087X1C5 515 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 RXRAP19793 462 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 U2AF2P26368 475 aaKnown RBP eCLIP16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 USP5P45974 858 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 GUCY1B3Q02153 619 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 CFAP100Q494V2 611 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 KRT40Q6A162 431 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 NBPF11Q86T75 865 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 CRACR2BQ8N4Y2 399 aaPredicted RBP16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 ANKS1AQ92625 1134 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 ZKSCAN3Q9BRR0 538 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 FUCA2Q9BTY2 467 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 NUP62CLQ9H1M0 184 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 ZNF287Q9HBT7 754 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 TTF2Q9UNY4 1162 aaKnown RBP16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 FOCADQ5VW36 1801 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 PITPNM2Q9BZ72 1349 aa16.69■□□□□ 0.26
RTFDC1-203ENST00000395881 A0A1W2PQ27 194 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 A0A1W2PQ64 194 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 A0A1W2PQD8 194 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 LIG1P18858 919 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 DLGAP5Q15398 846 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 SH3RF3Q8TEJ3 882 aaPredicted RBP16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 PHKBQ93100 1093 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 PRMT6Q96LA8 375 aaPredicted RBP16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 MYL10Q9BUA6 226 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 SLC26A6Q9BXS9 759 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 CELF2O95319 508 aaKnown RBP16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 FOSBP53539 338 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 TROAPQ12815 778 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 MAP3K11Q16584 847 aa16.68■□□□□ 0.26
RTFDC1-203ENST00000395881 DGKHQ86XP1 1220 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms