RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 SLBPQ14493 270 aaKnown RBP eCLIP7.92□□□□□ -1.14
RNU6-40P-201ENST00000384254 KIAA1211LQ6NV74 962 aa7.92□□□□□ -1.14
RNU6-40P-201ENST00000384254 ARMCX6Q7L4S7 300 aa7.92□□□□□ -1.14
RNU6-40P-201ENST00000384254 ST13P5Q8NFI4 369 aaPredicted RBP7.92□□□□□ -1.14
RNU6-40P-201ENST00000384254 MICAL1Q8TDZ2 1067 aa7.92□□□□□ -1.14
RNU6-40P-201ENST00000384254 WFDC12Q8WWY7 111 aa7.92□□□□□ -1.14
RNU6-40P-201ENST00000384254 SLC6A18Q96N87 628 aa7.92□□□□□ -1.14
RNU6-40P-201ENST00000384254 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.91□□□□□ -1.14
RNU6-40P-201ENST00000384254 SMARCC1Q92922 1105 aaPredicted RBP7.91□□□□□ -1.14
RNU6-40P-201ENST00000384254 UTP4Q969X6 686 aaKnown RBP7.91□□□□□ -1.14
RNU6-40P-201ENST00000384254 ACSS3Q9H6R3 686 aa7.91□□□□□ -1.14
RNU6-40P-201ENST00000384254 CWC22Q9HCG8 908 aaKnown RBP7.91□□□□□ -1.14
RNU6-40P-201ENST00000384254 ZNF214Q9UL59 606 aaPredicted RBP7.91□□□□□ -1.14
RNU6-40P-201ENST00000384254 PCDHB10Q9UN67 800 aa7.91□□□□□ -1.14
RNU6-40P-201ENST00000384254 LTBP3Q9NS15 1303 aa7.91□□□□□ -1.14
RNU6-40P-201ENST00000384254 AGRPO00253 132 aa7.9□□□□□ -1.14
RNU6-40P-201ENST00000384254 HMGB1P09429 215 aaKnown RBP7.9□□□□□ -1.14
RNU6-40P-201ENST00000384254 NOS3P29474 1203 aa7.9□□□□□ -1.14
RNU6-40P-201ENST00000384254 PMS1P54277 932 aaKnown RBP7.9□□□□□ -1.14
RNU6-40P-201ENST00000384254 Q6ZS46 218 aa7.9□□□□□ -1.14
RNU6-40P-201ENST00000384254 UBE3DQ7Z6J8 389 aa7.9□□□□□ -1.14
RNU6-40P-201ENST00000384254 BAHD1Q8TBE0 780 aaPredicted RBP7.9□□□□□ -1.14
RNU6-40P-201ENST00000384254 ZNF669Q96BR6 464 aaPredicted RBP7.9□□□□□ -1.14
RNU6-40P-201ENST00000384254 EPN3Q9H201 632 aa7.9□□□□□ -1.14
RNU6-40P-201ENST00000384254 SUCOQ9UBS9 1254 aaKnown RBP7.9□□□□□ -1.14
RNU6-40P-201ENST00000384254 IQCA1LA6NCM1 817 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 FAM181BA6NEQ2 426 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 HSD3B2P26439 372 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 ETV3P41162 512 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 RNF4P78317 190 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 SSRP1Q08945 709 aaKnown RBP7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 CDPF1Q6NVV7 123 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 CCDC144CPQ8IYA2 1237 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 NLGN1Q8N2Q7 840 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 GIMAP7Q8NHV1 300 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 SH3TC2Q8TF17 1288 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 FBLIM1Q8WUP2 373 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 FAM46AQ96IP4 442 aaKnown RBP7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 MIPEPQ99797 713 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 KCNF1Q9H3M0 494 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 SEMA6CQ9H3T2 930 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 PFDN2Q9UHV9 154 aa7.89□□□□□ -1.15
RNU6-40P-201ENST00000384254 KDM2BQ8NHM5 1336 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 ANKRD62A6NC57 917 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 SUSD5O60279 629 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 UBOX5O94941 541 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 TP53P04637 393 aaPredicted RBP7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 NFICP08651 508 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 BMP3P12645 472 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 ADGRE1Q14246 886 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 MBTPS1Q14703 1052 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 SGO2Q562F6 1265 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 TAF7LQ5H9L4 462 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 LETMD1Q6P1Q0 360 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 RNPC3Q96LT9 517 aaKnown RBP7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 MKRN2Q9H000 416 aaKnown RBP7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 SLKQ9H2G2 1235 aaPredicted RBP7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 LGR6Q9HBX8 967 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 FAM86C1Q9NVL1 165 aa7.88□□□□□ -1.15
RNU6-40P-201ENST00000384254 FAM95CA0A1B0GW59 222 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 RNF225M0QZC1 329 aaPredicted RBP7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 ENPP3O14638 875 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 CDC45O75419 566 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 COL8A1P27658 744 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 ZNF143P52747 638 aaPredicted RBP7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 TDRD10Q5VZ19 366 aaKnown RBP7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 HEATR6Q6AI08 1181 aaKnown RBP7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 MRM1Q6IN84 353 aaKnown RBP7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 PAOXQ6QHF9 649 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 TXNRD3Q86VQ6 643 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 HOMER1Q86YM7 354 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 TMEM192Q8IY95 271 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 LRRC47Q8N1G4 583 aaKnown RBP7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 THAP3Q8WTV1 239 aaPredicted RBP7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 KLHL6Q8WZ60 621 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 APPBP2Q92624 585 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 MYRFLQ96LU7 910 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 GBP3Q9H0R5 595 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 CEP131Q9UPN4 1083 aa7.87□□□□□ -1.15
RNU6-40P-201ENST00000384254 ANKRD34BA5PLL1 514 aa7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 DHX15O43143 795 aaKnown RBP7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 CYP7A1P22680 504 aa7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 MAP4P27816 1152 aaKnown RBP7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 TCEAL1Q15170 157 aa7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 SV2CQ496J9 727 aa7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 C2orf27AQ580R0 203 aa7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 EZH1Q92800 747 aaPredicted RBP7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 PPP1R14AQ96A00 147 aa7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 PUS7Q96PZ0 661 aaKnown RBP7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 UBL7Q96S82 380 aaPredicted RBP7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 APBA2Q99767 749 aa7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 LRP2BPQ9P2M1 347 aa7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 ZMYM5Q9UJ78 669 aa7.86□□□□□ -1.15
RNU6-40P-201ENST00000384254 NFKBIBQ15653 356 aa7.85□□□□□ -1.15
RNU6-40P-201ENST00000384254 EGFLAMQ63HQ2 1017 aa7.85□□□□□ -1.15
RNU6-40P-201ENST00000384254 SPATC1Q76KD6 591 aa7.85□□□□□ -1.15
RNU6-40P-201ENST00000384254 FAM20CQ8IXL6 584 aa7.85□□□□□ -1.15
RNU6-40P-201ENST00000384254 LILRB2Q8N423 598 aa7.85□□□□□ -1.15
RNU6-40P-201ENST00000384254 HAUS7Q99871 368 aa7.85□□□□□ -1.15
RNU6-40P-201ENST00000384254 PRDM10Q9NQV6 1147 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms