RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 NLRP3Q96P20 1036 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 IFIH1Q9BYX4 1025 aaKnown RBP8.6□□□□□ -1.03
UFL1-201ENST00000369278 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.6□□□□□ -1.03
UFL1-201ENST00000369278 EHD2Q9NZN4 543 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 SLC4A7Q9Y6M7 1214 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 NCK2O43639 380 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 DIAPH2O60879 1101 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 FTCDO95954 541 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 NR1D1P20393 614 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 HDGFP51858 240 aaKnown RBP8.6□□□□□ -1.03
UFL1-201ENST00000369278 RFX8Q6ZV50 586 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 INTS8Q75QN2 995 aaKnown RBP8.6□□□□□ -1.03
UFL1-201ENST00000369278 MIGA1Q8NAN2 632 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 TMEM87AQ8NBN3 555 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 DNAJC17Q9NVM6 304 aaKnown RBP8.6□□□□□ -1.03
UFL1-201ENST00000369278 CCDC61Q9Y6R9 512 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 A0A1W2PP64 1363 aa8.6□□□□□ -1.03
UFL1-201ENST00000369278 HIP1RO75146 1068 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 HEXIM1O94992 359 aaKnown RBP8.59□□□□□ -1.03
UFL1-201ENST00000369278 HDLBPQ00341 1268 aaKnown RBP8.59□□□□□ -1.03
UFL1-201ENST00000369278 RRAGAQ7L523 313 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 COPS6Q7L5N1 327 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 REXO1L1PQ8IX06 675 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 CCDC155Q8N6L0 562 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 OR2W6PQ8NHA6 318 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 MIPOL1Q8TD10 442 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 TSC22D3Q99576 134 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 ELAC2Q9BQ52 826 aaKnown RBP8.59□□□□□ -1.03
UFL1-201ENST00000369278 NOC4LQ9BVI4 516 aaKnown RBP8.59□□□□□ -1.03
UFL1-201ENST00000369278 PAG1Q9NWQ8 432 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 TBC1D7Q9P0N9 293 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 GRM8O00222 908 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 KCNQ3O43525 872 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 IKQ13123 557 aaPredicted RBP8.59□□□□□ -1.03
UFL1-201ENST00000369278 IFT20Q8IY31 132 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 NSUN7Q8NE18 718 aaKnown RBP8.59□□□□□ -1.03
UFL1-201ENST00000369278 KLHL29Q96CT2 875 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 PLEKHF1Q96S99 279 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 GON4LQ3T8J9 2241 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 LRRD1A4D1F6 860 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 PSMA7O14818 248 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 FANCGO15287 622 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 MOCS3O95396 460 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 RAPGEF3O95398 923 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 BAG2O95816 211 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 TMOD1P28289 359 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 ERCC5P28715 1186 aaPredicted RBP8.59□□□□□ -1.03
UFL1-201ENST00000369278 IGBP1P78318 339 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 SLC9C2Q5TAH2 1124 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 FBXO31Q5XUX0 539 aaPredicted RBP8.59□□□□□ -1.03
UFL1-201ENST00000369278 KIF2BQ8N4N8 673 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 RPGRQ92834 1020 aaKnown RBP8.59□□□□□ -1.03
UFL1-201ENST00000369278 MMS19Q96T76 1030 aa8.59□□□□□ -1.03
UFL1-201ENST00000369278 CCDC194A0A1B0GVG4 234 aa8.59□□□□□ -1.04
UFL1-201ENST00000369278 E7EWF7 191 aa8.59□□□□□ -1.04
UFL1-201ENST00000369278 KCNK3O14649 394 aa8.59□□□□□ -1.04
UFL1-201ENST00000369278 APBB1IPQ7Z5R6 666 aaPredicted RBP8.59□□□□□ -1.04
UFL1-201ENST00000369278 CSGALNACT2Q8N6G5 542 aa8.59□□□□□ -1.04
UFL1-201ENST00000369278 XAGE3Q8WTP9 111 aa8.59□□□□□ -1.04
UFL1-201ENST00000369278 DONSONQ9NYP3 566 aa8.59□□□□□ -1.04
UFL1-201ENST00000369278 KAT6BQ8WYB5 2073 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 EVI5O60447 810 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 RTN1Q16799 776 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 ZNF449Q6P9G9 518 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 TAB3Q8N5C8 712 aaPredicted RBP8.58□□□□□ -1.04
UFL1-201ENST00000369278 RNF217Q8TC41 542 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 NELFBQ8WX92 580 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 DDX17Q92841 729 aaKnown RBP8.58□□□□□ -1.04
UFL1-201ENST00000369278 GBP5Q96PP8 586 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 VPS54Q9P1Q0 977 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 DBF4Q9UBU7 674 aaPredicted RBP8.58□□□□□ -1.04
UFL1-201ENST00000369278 RCOR1Q9UKL0 485 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 PACSIN2Q9UNF0 486 aaPredicted RBP8.58□□□□□ -1.04
UFL1-201ENST00000369278 JAG2Q9Y219 1238 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 AATKQ6ZMQ8 1374 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 TUBBP07437 444 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 RASSF7Q02833 373 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 PAK2Q13177 524 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 IDI1Q13907 227 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 CEP128Q6ZU80 1094 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 ZNF513Q8N8E2 541 aaPredicted RBP8.58□□□□□ -1.04
UFL1-201ENST00000369278 LINC00301Q8NCQ3 95 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 OR8K1Q8NGG5 319 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 PUS7Q96PZ0 661 aaKnown RBP8.58□□□□□ -1.04
UFL1-201ENST00000369278 ADAM33Q9BZ11 813 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 NACAP1Q9BZK3 213 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 NSRP1Q9H0G5 558 aaKnown RBP8.58□□□□□ -1.04
UFL1-201ENST00000369278 EXOC1Q9NV70 894 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 ARPP21Q9UBL0 812 aaPredicted RBP8.58□□□□□ -1.04
UFL1-201ENST00000369278 ATP8A1Q9Y2Q0 1164 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 RAPGEF6Q8TEU7 1601 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 DISP1Q96F81 1524 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 PHF20L1A8MW92 1017 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 ATP1A1P05023 1023 aaKnown RBP8.58□□□□□ -1.04
UFL1-201ENST00000369278 SLC8A1P32418 973 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 COL9A3Q14050 684 aaPredicted RBP8.58□□□□□ -1.04
UFL1-201ENST00000369278 KRT26Q7Z3Y9 468 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 WASF1Q92558 559 aa8.58□□□□□ -1.04
UFL1-201ENST00000369278 RRP36Q96EU6 259 aaKnown RBP8.58□□□□□ -1.04
UFL1-201ENST00000369278 LRWD1Q9UFC0 647 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms