RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 SLC4A4Q9Y6R1 1079 aa12.1□□□□□ -0.47
SMC3-201ENST00000361804 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
SMC3-201ENST00000361804 CDKL5O76039 1030 aa12.1□□□□□ -0.47
SMC3-201ENST00000361804 ZRANB2O95218 330 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMC3-201ENST00000361804 BMS1Q14692 1282 aaKnown RBP12.1□□□□□ -0.47
SMC3-201ENST00000361804 SUGCTQ9HAC7 445 aa12.1□□□□□ -0.47
SMC3-201ENST00000361804 CASQ1P31415 396 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 DPYDQ12882 1025 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 RTN1Q16799 776 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 WWC2Q6AWC2 1192 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 BLZF1Q9H2G9 400 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 MAPK8IP1Q9UQF2 711 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 CCDC88AQ3V6T2 1871 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 PHLPP2Q6ZVD8 1323 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 CBFA2T2O43439 604 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 FMNL1O95466 1100 aaPredicted RBP12.09□□□□□ -0.47
SMC3-201ENST00000361804 VEGFAP15692 232 aaPredicted RBP12.09□□□□□ -0.47
SMC3-201ENST00000361804 CCT6AP40227 531 aaKnown RBP12.09□□□□□ -0.47
SMC3-201ENST00000361804 PPP2R3AQ06190 1150 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 TBX2Q13207 712 aaPredicted RBP12.09□□□□□ -0.47
SMC3-201ENST00000361804 RAD9BQ6WBX8 426 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 MFSD6Q6ZSS7 791 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 CCDC12Q8WUD4 166 aaPredicted RBP12.09□□□□□ -0.47
SMC3-201ENST00000361804 SMARCE1Q969G3 411 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 KLRK1P26718 216 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 UBE3CQ15386 1083 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 SPECC1LQ69YQ0 1117 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 EEF2KMTQ96G04 330 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 TBC1D8O95759 1140 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 RBL2Q08999 1139 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 AKNAD1Q5T1N1 836 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 KIFC2Q96AC6 838 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.09□□□□□ -0.47
SMC3-201ENST00000361804 ABCF2Q9UG63 623 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 TFR2Q9UP52 801 aa12.09□□□□□ -0.47
SMC3-201ENST00000361804 RTL9Q8NET4 1388 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 RNF225M0QZC1 329 aaPredicted RBP12.08□□□□□ -0.48
SMC3-201ENST00000361804 ARHGAP6O43182 974 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 ACTN4O43707 911 aaKnown RBP12.08□□□□□ -0.48
SMC3-201ENST00000361804 ZNF18P17022 549 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 WTAPQ15007 396 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 TMEM87BQ96K49 555 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 PATL2C9JE40 543 aaKnown RBP12.08□□□□□ -0.48
SMC3-201ENST00000361804 PLEKHA8P1O95397 391 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 PTPREP23469 700 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 ZNF174Q15697 407 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 SGMS1Q86VZ5 419 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 PARD6BQ9BYG5 372 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 ACRBPQ8NEB7 543 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 RAI14Q9P0K7 980 aa12.08□□□□□ -0.48
SMC3-201ENST00000361804 MORC3Q14149 939 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 RNF216Q9NWF9 866 aaPredicted RBP12.07□□□□□ -0.48
SMC3-201ENST00000361804 LOC102724428A0A0B4J2F2 783 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 NMT2O60551 498 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 IFNAR1P17181 557 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 SIK1P57059 783 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 BARGINQ6ZT62 677 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 DZIP3Q86Y13 1208 aaKnown RBP12.07□□□□□ -0.48
SMC3-201ENST00000361804 CRACR2BQ8N4Y2 399 aaPredicted RBP12.07□□□□□ -0.48
SMC3-201ENST00000361804 CDC5LQ99459 802 aaKnown RBP12.07□□□□□ -0.48
SMC3-201ENST00000361804 NRXN2Q9P2S2 1712 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 FAM237AA0A1B0GTK4 181 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 OAS2P29728 719 aaKnown RBP12.07□□□□□ -0.48
SMC3-201ENST00000361804 SAFBQ15424 915 aaKnown RBP eCLIP12.07□□□□□ -0.484e-6■□□□□ 10.9
SMC3-201ENST00000361804 CC2D1AQ6P1N0 951 aaPredicted RBP12.07□□□□□ -0.48
SMC3-201ENST00000361804 ZNF654Q8IZM8 581 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 JAG2Q9Y219 1238 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 MRFAP1Q9Y605 127 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 ZNF804BA4D1E1 1349 aa12.07□□□□□ -0.48
SMC3-201ENST00000361804 GPIHBP1Q8IV16 184 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 SYMPKQ92797 1274 aaKnown RBP12.06□□□□□ -0.48
SMC3-201ENST00000361804 ZSCAN12O43309 604 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 ADAMTS2O95450 1211 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 TM4SF1P30408 202 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 KCNJ6P48051 423 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 HNRNPH2P55795 449 aaKnown RBP12.06□□□□□ -0.48
SMC3-201ENST00000361804 DYNLL1P63167 89 aaKnown RBP12.06□□□□□ -0.48
SMC3-201ENST00000361804 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 TTF1Q15361 905 aaPredicted RBP12.06□□□□□ -0.48
SMC3-201ENST00000361804 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
SMC3-201ENST00000361804 WDR19Q8NEZ3 1342 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 CASP14P31944 242 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 SARSP49591 514 aaKnown RBP12.06□□□□□ -0.48
SMC3-201ENST00000361804 FXR1P51114 621 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMC3-201ENST00000361804 PUM3Q15397 648 aaKnown RBP12.06□□□□□ -0.48
SMC3-201ENST00000361804 APTXQ7Z2E3 356 aaKnown RBP12.06□□□□□ -0.48
SMC3-201ENST00000361804 TICAM2Q86XR7 235 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 TRIM22Q8IYM9 498 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 IGSF22Q8N9C0 903 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 FANCBQ8NB91 859 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 LRP2BPQ9P2M1 347 aa12.06□□□□□ -0.48
SMC3-201ENST00000361804 V9GY48 417 aaPredicted RBP12.06□□□□□ -0.48
SMC3-201ENST00000361804 EFCAB8A8MWE9 144 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 STARD3NLO95772 234 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 NR1I3Q14994 352 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 TNKSO95271 1327 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 H3BQF6 201 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 LIFRP42702 1097 aa12.05□□□□□ -0.48
SMC3-201ENST00000361804 MAP3K12Q12852 859 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms