RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PPP4R3BQ5MIZ7 849 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 OTUD5Q96G74 571 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.95■□□□□ 0.46
TPM1-206ENST00000358278 AS3MTQ9HBK9 375 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 STX8Q9UNK0 236 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 ZHX2Q9Y6X8 837 aa17.95■□□□□ 0.46
TPM1-206ENST00000358278 ERICH2A1L162 156 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 SPDYE5A6NIY4 337 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 PRC1O43663 620 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 ZNF157P51786 506 aaPredicted RBP17.94■□□□□ 0.46
TPM1-206ENST00000358278 PAXIP1Q6ZW49 1069 aaPredicted RBP17.94■□□□□ 0.46
TPM1-206ENST00000358278 DHX32Q7L7V1 743 aaKnown RBP17.94■□□□□ 0.46
TPM1-206ENST00000358278 CNKSR2Q8WXI2 1034 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 OPTNQ96CV9 577 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 ZSCAN10Q96SZ4 725 aaPredicted RBP17.94■□□□□ 0.46
TPM1-206ENST00000358278 TM6SF1Q9BZW5 370 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 ARHGEF10LQ9HCE6 1279 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 IL17RBQ9NRM6 502 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 TCP11L1Q9NUJ3 509 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 MTMR4Q9NYA4 1195 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 CYP46A1Q9Y6A2 500 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 TNKSO95271 1327 aa17.94■□□□□ 0.46
TPM1-206ENST00000358278 IGKV6D-41A0A0C4DH26 115 aa17.93■□□□□ 0.46
TPM1-206ENST00000358278 TTLL1O95922 423 aa17.93■□□□□ 0.46
TPM1-206ENST00000358278 CPA1P15085 419 aa17.93■□□□□ 0.46
TPM1-206ENST00000358278 ANTXR2P58335 489 aa17.93■□□□□ 0.46
TPM1-206ENST00000358278 PPATQ06203 517 aa17.93■□□□□ 0.46
TPM1-206ENST00000358278 COL9A3Q14050 684 aaPredicted RBP17.93■□□□□ 0.46
TPM1-206ENST00000358278 CCDC178Q5BJE1 867 aa17.93■□□□□ 0.46
TPM1-206ENST00000358278 RGMBQ6NW40 437 aa17.93■□□□□ 0.46
TPM1-206ENST00000358278 TBC1D2Q9BYX2 928 aa17.93■□□□□ 0.46
TPM1-206ENST00000358278 UPF3BQ9BZI7 483 aaKnown RBP17.93■□□□□ 0.46
TPM1-206ENST00000358278 LOC285556D6RIA3 1793 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 IFIT3O14879 490 aaKnown RBP17.92■□□□□ 0.46
TPM1-206ENST00000358278 EEF2P13639 858 aaKnown RBP17.92■□□□□ 0.46
TPM1-206ENST00000358278 C1QTNF8P60827 252 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 FGD1P98174 961 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 RUFY3Q7L099 469 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 IL17RAQ96F46 866 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 TCEANC2Q96MN5 208 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 FEZ1Q99689 392 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 ZSWIM6Q9HCJ5 1215 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 PCNTO95613 3336 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 TRIM75PA6NK02 468 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 RPS6KB1P23443 525 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 PPIL2Q13356 520 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 TMEM67Q5HYA8 995 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 ENAHQ8N8S7 591 aaPredicted RBP17.92■□□□□ 0.46
TPM1-206ENST00000358278 ZNF280CQ8ND82 737 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 WNK4Q96J92 1243 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 HHIPL1Q96JK4 782 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 TMEM87BQ96K49 555 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 LRRC2Q9BYS8 371 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 SH2D4AQ9H788 454 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 CLIP2Q9UDT6 1046 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 WDR19Q8NEZ3 1342 aa17.92■□□□□ 0.46
TPM1-206ENST00000358278 SPP2Q13103 211 aa17.91■□□□□ 0.46
TPM1-206ENST00000358278 WTAPQ15007 396 aa17.91■□□□□ 0.46
TPM1-206ENST00000358278 IFIT1BQ5T764 474 aaKnown RBP17.91■□□□□ 0.46
TPM1-206ENST00000358278 RASAL3Q86YV0 1011 aa17.91■□□□□ 0.46
TPM1-206ENST00000358278 WDR18Q9BV38 432 aa17.91■□□□□ 0.46
TPM1-206ENST00000358278 NYAP2Q9P242 653 aa17.91■□□□□ 0.46
TPM1-206ENST00000358278 CEP350Q5VT06 3117 aa17.91■□□□□ 0.46
TPM1-206ENST00000358278 IRF6O14896 467 aa17.9■□□□□ 0.46
TPM1-206ENST00000358278 ECE1P42892 770 aa17.9■□□□□ 0.46
TPM1-206ENST00000358278 MKRN3Q13064 507 aaKnown RBP17.9■□□□□ 0.46
TPM1-206ENST00000358278 ACER1Q8TDN7 264 aa17.9■□□□□ 0.46
TPM1-206ENST00000358278 TTC14Q96N46 770 aa17.9■□□□□ 0.46
TPM1-206ENST00000358278 MTA3Q9BTC8 594 aa17.9■□□□□ 0.46
TPM1-206ENST00000358278 AFG3L2Q9Y4W6 797 aa17.9■□□□□ 0.46
TPM1-206ENST00000358278 USP17L10C9JJH3 530 aa17.89■□□□□ 0.46
TPM1-206ENST00000358278 RAD21O60216 631 aa17.89■□□□□ 0.46
TPM1-206ENST00000358278 ZBTB48P10074 688 aaPredicted RBP17.89■□□□□ 0.46
TPM1-206ENST00000358278 EXOSC10Q01780 885 aaKnown RBP17.89■□□□□ 0.46
TPM1-206ENST00000358278 GRM1Q13255 1194 aa17.89■□□□□ 0.46
TPM1-206ENST00000358278 MTMR2Q13614 643 aa17.89■□□□□ 0.46
TPM1-206ENST00000358278 ZYXQ15942 572 aaKnown RBP17.89■□□□□ 0.46
TPM1-206ENST00000358278 SPRYD7Q5W111 196 aa17.89■□□□□ 0.46
TPM1-206ENST00000358278 DGKHQ86XP1 1220 aa17.89■□□□□ 0.46
TPM1-206ENST00000358278 LRRC47Q8N1G4 583 aaKnown RBP17.89■□□□□ 0.46
TPM1-206ENST00000358278 KIF2CQ99661 725 aa17.89■□□□□ 0.46
TPM1-206ENST00000358278 RASSF10A6NK89 507 aa17.89■□□□□ 0.45
TPM1-206ENST00000358278 SLC10A3P09131 477 aa17.89■□□□□ 0.45
TPM1-206ENST00000358278 TOP1P11387 765 aaKnown RBP17.89■□□□□ 0.45
TPM1-206ENST00000358278 GJA5P36382 358 aa17.89■□□□□ 0.45
TPM1-206ENST00000358278 NEK4P51957 841 aa17.89■□□□□ 0.45
TPM1-206ENST00000358278 SEC23AQ15436 765 aa17.89■□□□□ 0.45
TPM1-206ENST00000358278 DEFB115Q30KQ5 88 aa17.89■□□□□ 0.45
TPM1-206ENST00000358278 RCSD1Q6JBY9 416 aa17.89■□□□□ 0.45
TPM1-206ENST00000358278 SIAH1Q8IUQ4 282 aa17.89■□□□□ 0.45
TPM1-206ENST00000358278 IGDCC4Q8TDY8 1250 aa17.89■□□□□ 0.45
TPM1-206ENST00000358278 CCDC102AQ96A19 550 aa17.89■□□□□ 0.45
TPM1-206ENST00000358278 KAT14Q9H8E8 782 aa17.89■□□□□ 0.45
TPM1-206ENST00000358278 A0A1W2PRG0 241 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 SH2B2O14492 632 aaPredicted RBP17.88■□□□□ 0.45
TPM1-206ENST00000358278 HSPA6P17066 643 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 NOVP48745 357 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 USP14P54578 494 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 BACE1P56817 501 aa17.88■□□□□ 0.45
TPM1-206ENST00000358278 HTRA3P83110 453 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms