RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 IFNL3Q8IZI9 196 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 ACSBG1Q96GR2 724 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 RPGRIP1Q96KN7 1286 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 PPP1R2P41236 205 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 NBPF14Q5TI25 921 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 CCDC25Q86WR0 208 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 C2CD5Q86YS7 1000 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 SAMSN1Q9NSI8 373 aaKnown RBP16.57■□□□□ 0.24
RRP1B-201ENST00000340648 TXKP42681 527 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 APOA5Q6Q788 366 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 CSRNP2Q9H175 543 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 MED4Q9NPJ6 270 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 SLFNL1Q499Z3 407 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 FANCBQ8NB91 859 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 SYMPKQ92797 1274 aaKnown RBP16.57■□□□□ 0.24
RRP1B-201ENST00000340648 C19orf44Q9H6X5 657 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 MAN1B1Q9UKM7 699 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 GLI2P10070 1586 aa16.57■□□□□ 0.24
RRP1B-201ENST00000340648 PDE8AO60658 829 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 ACTN2P35609 894 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 LIG3P49916 1009 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 EPN1Q9Y6I3 576 aaPredicted RBP16.56■□□□□ 0.24
RRP1B-201ENST00000340648 DYMQ7RTS9 669 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 EEF2KMTQ96G04 330 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 PTPN12Q05209 780 aaKnown RBP16.56■□□□□ 0.24
RRP1B-201ENST00000340648 PAK2Q13177 524 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 PICALMQ13492 652 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 TRIM31Q9BZY9 425 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 HAUS4Q9H6D7 363 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 SAMD15Q9P1V8 674 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 SH3TC1Q8TE82 1336 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 CCDC151A5D8V7 595 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 RRAGAQ7L523 313 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 BCAS4Q8TDM0 211 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 OSBP2Q969R2 916 aa16.56■□□□□ 0.24
RRP1B-201ENST00000340648 ZMYND10O75800 440 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 ATP1A2P50993 1020 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 ACRBPQ8NEB7 543 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 QRICH2Q9H0J4 1663 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 GUCY2FP51841 1108 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 PPARAQ07869 468 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 SF3A3Q12874 501 aaKnown RBP eCLIP16.55■□□□□ 0.245e-6■■□□□ 14.2
RRP1B-201ENST00000340648 PPP2R5BQ15173 497 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 SLC9C1Q4G0N8 1177 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 CFAP221Q4G0U5 840 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 HOOK3Q86VS8 718 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 PHKG2P15735 406 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 CTNNA2P26232 953 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 PRPHP41219 470 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.55■□□□□ 0.24
RRP1B-201ENST00000340648 STMN4Q9H169 189 aaPredicted RBP16.55■□□□□ 0.24
RRP1B-201ENST00000340648 ROBO2Q9HCK4 1378 aa16.55■□□□□ 0.24
RRP1B-201ENST00000340648 A6NNZ2 444 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 CEP104O60308 925 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 COPB1P53618 953 aaKnown RBP16.54■□□□□ 0.24
RRP1B-201ENST00000340648 TUBB8Q3ZCM7 444 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 TTC19Q6DKK2 380 aaPredicted RBP16.54■□□□□ 0.24
RRP1B-201ENST00000340648 NLRP3Q96P20 1036 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 NLRC4Q9NPP4 1024 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 MORC2Q9Y6X9 1032 aaPredicted RBP16.54■□□□□ 0.24
RRP1B-201ENST00000340648 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 CCDC26Q8TAB7 109 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 IL25Q9H293 177 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.54■□□□□ 0.24
RRP1B-201ENST00000340648 E7EVH7 732 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 VIMP08670 466 aaKnown RBP16.54■□□□□ 0.24
RRP1B-201ENST00000340648 PARP1P09874 1014 aaKnown RBP16.54■□□□□ 0.24
RRP1B-201ENST00000340648 ARHGAP25P42331 645 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 CAPN7Q9Y6W3 813 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 MLH3Q9UHC1 1453 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 FAM47AQ5JRC9 791 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 CAPS2Q9BXY5 557 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 MED23Q9ULK4 1368 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 NLRP1Q9C000 1473 aa16.54■□□□□ 0.24
RRP1B-201ENST00000340648 TMEM232C9JQI7 657 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 ERCC5P28715 1186 aaPredicted RBP16.53■□□□□ 0.24
RRP1B-201ENST00000340648 CCT5P48643 541 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 TCIRG1Q13488 830 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 NAA25Q14CX7 972 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 PI16Q6UXB8 463 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 CABP7Q86V35 215 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 DHX40Q8IX18 779 aaKnown RBP16.53■□□□□ 0.24
RRP1B-201ENST00000340648 CABS1Q96KC9 395 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 PLVAPQ9BX97 442 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 EPC1Q9H2F5 836 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
RRP1B-201ENST00000340648 TRIM58Q8NG06 486 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 KCNK9Q9NPC2 374 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 AATFQ9NY61 560 aaKnown RBP eCLIP16.53■□□□□ 0.24
RRP1B-201ENST00000340648 SAP30BPQ9UHR5 308 aaKnown RBP16.53■□□□□ 0.24
RRP1B-201ENST00000340648 DENND2AQ9ULE3 1009 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 TNKSO95271 1327 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 ABCC3O15438 1527 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 ASIC2Q16515 512 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 EXOC4Q96A65 974 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 SAMM50Q9Y512 469 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 RNF40O75150 1001 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 HLA-DOAP06340 250 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 GRIPAP1Q4V328 841 aa16.53■□□□□ 0.24
RRP1B-201ENST00000340648 CCDC65Q8IXS2 484 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms