RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CCAR1Q8IX12 1150 aaKnown RBP25.95■■□□□ 1.75
PDLIM2-203ENST00000339162 RGS22Q8NE09 1264 aa25.95■■□□□ 1.75
PDLIM2-203ENST00000339162 POLR3EQ9NVU0 708 aa25.95■■□□□ 1.75
PDLIM2-203ENST00000339162 PCDHA7Q9UN72 937 aa25.95■■□□□ 1.75
PDLIM2-203ENST00000339162 ANO1Q5XXA6 986 aa25.95■■□□□ 1.74
PDLIM2-203ENST00000339162 SLC16A10Q8TF71 515 aa25.95■■□□□ 1.74
PDLIM2-203ENST00000339162 NUP62CLQ9H1M0 184 aa25.95■■□□□ 1.74
PDLIM2-203ENST00000339162 GOLPH3LQ9H4A5 285 aa25.95■■□□□ 1.74
PDLIM2-203ENST00000339162 ATF5Q9Y2D1 282 aaPredicted RBP25.95■■□□□ 1.74
PDLIM2-203ENST00000339162 BAZ2BQ9UIF8 2168 aaKnown RBP25.95■■□□□ 1.74
PDLIM2-203ENST00000339162 YDJCA8MPS7 323 aa25.94■■□□□ 1.74
PDLIM2-203ENST00000339162 PRPF3O43395 683 aaKnown RBP25.94■■□□□ 1.74
PDLIM2-203ENST00000339162 SF3A1Q15459 793 aaKnown RBP25.94■■□□□ 1.74
PDLIM2-203ENST00000339162 CC2D2BQ6DHV5 1058 aa25.94■■□□□ 1.74
PDLIM2-203ENST00000339162 LETM1O95202 739 aaPredicted RBP25.94■■□□□ 1.74
PDLIM2-203ENST00000339162 SLURP2P0DP57 97 aa25.94■■□□□ 1.74
PDLIM2-203ENST00000339162 NR5A1Q13285 461 aa25.94■■□□□ 1.74
PDLIM2-203ENST00000339162 STAG2Q8N3U4 1231 aa25.94■■□□□ 1.74
PDLIM2-203ENST00000339162 OXER1Q8TDS5 423 aa25.94■■□□□ 1.74
PDLIM2-203ENST00000339162 CNTNAP5Q8WYK1 1306 aa25.93■■□□□ 1.74
PDLIM2-203ENST00000339162 SAFBQ15424 915 aaKnown RBP eCLIP25.93■■□□□ 1.74
PDLIM2-203ENST00000339162 RASGRP2Q7LDG7 609 aa25.93■■□□□ 1.74
PDLIM2-203ENST00000339162 ZFPM1Q8IX07 1006 aa25.93■■□□□ 1.74
PDLIM2-203ENST00000339162 TMEM47Q9BQJ4 181 aa25.93■■□□□ 1.74
PDLIM2-203ENST00000339162 TCP11L1Q9NUJ3 509 aa25.93■■□□□ 1.74
PDLIM2-203ENST00000339162 SPTLC2O15270 562 aa25.92■■□□□ 1.74
PDLIM2-203ENST00000339162 NOSTRINQ8IVI9 506 aa25.92■■□□□ 1.74
PDLIM2-203ENST00000339162 ANKS1AQ92625 1134 aa25.92■■□□□ 1.74
PDLIM2-203ENST00000339162 ZDHHC15Q96MV8 337 aa25.92■■□□□ 1.74
PDLIM2-203ENST00000339162 CKAP2LQ8IYA6 745 aa25.92■■□□□ 1.74
PDLIM2-203ENST00000339162 SUPT20HQ8NEM7 779 aa25.92■■□□□ 1.74
PDLIM2-203ENST00000339162 OSBPL5Q9H0X9 879 aaPredicted RBP25.92■■□□□ 1.74
PDLIM2-203ENST00000339162 FOCADQ5VW36 1801 aa25.91■■□□□ 1.74
PDLIM2-203ENST00000339162 VEGFAP15692 232 aaPredicted RBP25.91■■□□□ 1.74
PDLIM2-203ENST00000339162 MARCKSP29966 332 aaPredicted RBP25.91■■□□□ 1.74
PDLIM2-203ENST00000339162 TCP10Q12799 353 aa25.91■■□□□ 1.74
PDLIM2-203ENST00000339162 CCDC93Q567U6 631 aa25.91■■□□□ 1.74
PDLIM2-203ENST00000339162 NEDD1Q8NHV4 660 aa25.91■■□□□ 1.74
PDLIM2-203ENST00000339162 TNMDQ9H2S6 317 aa25.91■■□□□ 1.74
PDLIM2-203ENST00000339162 ZNF277Q9NRM2 450 aaPredicted RBP25.91■■□□□ 1.74
PDLIM2-203ENST00000339162 YEATS4O95619 227 aa25.91■■□□□ 1.74
PDLIM2-203ENST00000339162 CEP95Q96GE4 821 aa25.91■■□□□ 1.74
PDLIM2-203ENST00000339162 FSIP1Q8NA03 581 aa25.9■■□□□ 1.74
PDLIM2-203ENST00000339162 KCNG4Q8TDN1 519 aa25.9■■□□□ 1.74
PDLIM2-203ENST00000339162 DDX19AQ9NUU7 478 aaKnown RBP25.9■■□□□ 1.74
PDLIM2-203ENST00000339162 MYH6P13533 1939 aa25.9■■□□□ 1.74
PDLIM2-203ENST00000339162 KIF5BP33176 963 aa25.9■■□□□ 1.74
PDLIM2-203ENST00000339162 NT5C2P49902 561 aa25.9■■□□□ 1.74
PDLIM2-203ENST00000339162 GABPAQ06546 454 aa25.9■■□□□ 1.74
PDLIM2-203ENST00000339162 FKBP1AP62942 108 aaKnown RBP25.89■■□□□ 1.74
PDLIM2-203ENST00000339162 CCDC178Q5BJE1 867 aa25.89■■□□□ 1.74
PDLIM2-203ENST00000339162 CLSTN2Q9H4D0 955 aa25.89■■□□□ 1.74
PDLIM2-203ENST00000339162 MAD2L2Q9UI95 211 aa25.89■■□□□ 1.74
PDLIM2-203ENST00000339162 GOLGA8HP0CJ92 632 aa25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 MAP3K11Q16584 847 aa25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 ADALQ6DHV7 355 aa25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 FUCA2Q9BTY2 467 aa25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 SERPINB13Q9UIV8 391 aa25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 A0A1B0GVL5 298 aa25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 SNW1Q13573 536 aaKnown RBP25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 SLC39A14Q15043 492 aa25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 RTKN2Q8IZC4 609 aa25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 MAP3K14Q99558 947 aa25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 FOXP1Q9H334 677 aaPredicted RBP25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 PPP1R1BQ9UD71 204 aaPredicted RBP25.88■■□□□ 1.73
PDLIM2-203ENST00000339162 RAD17O75943 681 aa25.87■■□□□ 1.73
PDLIM2-203ENST00000339162 AKR1B1P15121 316 aa25.87■■□□□ 1.73
PDLIM2-203ENST00000339162 XBP1P17861 261 aa25.87■■□□□ 1.73
PDLIM2-203ENST00000339162 TOB1P50616 345 aaPredicted RBP25.87■■□□□ 1.73
PDLIM2-203ENST00000339162 GRM4Q14833 912 aa25.87■■□□□ 1.73
PDLIM2-203ENST00000339162 CCDC73Q6ZRK6 1079 aa25.87■■□□□ 1.73
PDLIM2-203ENST00000339162 CLEC10AQ8IUN9 316 aa25.87■■□□□ 1.73
PDLIM2-203ENST00000339162 LARGE2Q8N3Y3 721 aa25.87■■□□□ 1.73
PDLIM2-203ENST00000339162 PHF20Q9BVI0 1012 aa25.87■■□□□ 1.73
PDLIM2-203ENST00000339162 EIF6P56537 245 aaKnown RBP25.87■■□□□ 1.73
PDLIM2-203ENST00000339162 FAM205CA6NFA0 338 aa25.86■■□□□ 1.73
PDLIM2-203ENST00000339162 ATP2B1P20020 1258 aa25.86■■□□□ 1.73
PDLIM2-203ENST00000339162 PTPAQ15257 358 aa25.86■■□□□ 1.73
PDLIM2-203ENST00000339162 MRIQ9BWK5 157 aa25.86■■□□□ 1.73
PDLIM2-203ENST00000339162 CPVLQ9H3G5 476 aa25.86■■□□□ 1.73
PDLIM2-203ENST00000339162 CABP5Q9NP86 173 aa25.86■■□□□ 1.73
PDLIM2-203ENST00000339162 ZNF646O15015 1829 aaPredicted RBP25.86■■□□□ 1.73
PDLIM2-203ENST00000339162 SLC35G1Q2M3R5 365 aa25.86■■□□□ 1.73
PDLIM2-203ENST00000339162 MRPS27Q92552 414 aaKnown RBP25.86■■□□□ 1.73
PDLIM2-203ENST00000339162 FAM196BA6NMK8 535 aa25.85■■□□□ 1.73
PDLIM2-203ENST00000339162 SCG2P13521 617 aa25.85■■□□□ 1.73
PDLIM2-203ENST00000339162 ENGASEQ8NFI3 743 aa25.85■■□□□ 1.73
PDLIM2-203ENST00000339162 TDRD3Q9H7E2 651 aaKnown RBP25.85■■□□□ 1.73
PDLIM2-203ENST00000339162 FAM198AQ9UFP1 575 aa25.85■■□□□ 1.73
PDLIM2-203ENST00000339162 SERPINA10Q9UK55 444 aa25.85■■□□□ 1.73
PDLIM2-203ENST00000339162 SHMT1P34896 483 aa25.84■■□□□ 1.73
PDLIM2-203ENST00000339162 HDLBPQ00341 1268 aaKnown RBP25.84■■□□□ 1.73
PDLIM2-203ENST00000339162 FAM160A1Q05DH4 1040 aa25.84■■□□□ 1.73
PDLIM2-203ENST00000339162 EARS2Q5JPH6 523 aaKnown RBP25.84■■□□□ 1.73
PDLIM2-203ENST00000339162 AXDND1Q5T1B0 1012 aaPredicted RBP25.84■■□□□ 1.73
PDLIM2-203ENST00000339162 PSMD1Q99460 953 aa25.84■■□□□ 1.73
PDLIM2-203ENST00000339162 UTRNP46939 3433 aa25.84■■□□□ 1.73
PDLIM2-203ENST00000339162 DDTLA6NHG4 134 aaPredicted RBP25.84■■□□□ 1.73
PDLIM2-203ENST00000339162 HLA-DOAP06340 250 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms