RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 ITPK1Q13572 414 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 CTR9Q6PD62 1173 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 LRRC31Q6UY01 552 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 USP49Q70CQ1 688 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 CYB5R4Q7L1T6 521 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 FBXL16Q8N461 479 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 MSANTD4Q8NCY6 345 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 FAM71BQ8TC56 605 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 GBP3Q9H0R5 595 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 SEC31BQ9NQW1 1179 aa13.42□□□□□ -0.26
RBM39-202ENST00000338163 APBA3O96018 575 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 FOXO4P98177 505 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 MDM2Q00987 491 aaPredicted RBP13.41□□□□□ -0.26
RBM39-202ENST00000338163 SAFBQ15424 915 aaKnown RBP eCLIP13.41□□□□□ -0.26
RBM39-202ENST00000338163 TBC1D10CQ8IV04 446 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 RABEP2Q9H5N1 569 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 INCENPQ9NQS7 918 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 A0A1B0GTH6 734 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 NBPF26B4DH59 902 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 NBPF14Q5TI25 921 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 NBPF10Q6P3W6 841 aaKnown RBP13.41□□□□□ -0.26
RBM39-202ENST00000338163 NOSTRINQ8IVI9 506 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 NBPF15Q8N660 670 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 RIN2Q8WYP3 895 aaPredicted RBP13.41□□□□□ -0.26
RBM39-202ENST00000338163 ZBTB3Q9H5J0 574 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.41□□□□□ -0.26
RBM39-202ENST00000338163 CCNL1Q9UK58 526 aaPredicted RBP13.41□□□□□ -0.26
RBM39-202ENST00000338163 SYNRGQ9UMZ2 1314 aa13.41□□□□□ -0.26
RBM39-202ENST00000338163 ENC1O14682 589 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 RANBP6O60518 1105 aaKnown RBP13.4□□□□□ -0.26
RBM39-202ENST00000338163 MFAP3LO75121 409 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 ZMYND10O75800 440 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 CDC25AP30304 524 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 FXR1P51114 621 aaKnown RBP eCLIP13.4□□□□□ -0.26
RBM39-202ENST00000338163 PLCD1P51178 756 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 MORC3Q14149 939 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 DIS3L2Q8IYB7 885 aaKnown RBP13.4□□□□□ -0.26
RBM39-202ENST00000338163 CMTR1Q8N1G2 835 aaKnown RBP13.4□□□□□ -0.26
RBM39-202ENST00000338163 PPM1EQ8WY54 764 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 HINFPQ9BQA5 517 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 SLF1Q9BQI6 1058 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 MKRN1Q9UHC7 482 aaKnown RBP13.4□□□□□ -0.26
RBM39-202ENST00000338163 UBN2Q6ZU65 1347 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 CYP19A1P11511 503 aaPredicted RBP13.4□□□□□ -0.26
RBM39-202ENST00000338163 SART3Q15020 963 aaKnown RBP13.4□□□□□ -0.26
RBM39-202ENST00000338163 E2F4Q16254 413 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 FILIP1LQ4L180 1135 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 TMEM67Q5HYA8 995 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 APPBP2Q92624 585 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 NUP88Q99567 741 aaPredicted RBP13.4□□□□□ -0.26
RBM39-202ENST00000338163 GUCA1BQ9UMX6 200 aa13.4□□□□□ -0.26
RBM39-202ENST00000338163 GUCY1A2P33402 732 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 CASP7P55210 303 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 NR5A1Q13285 461 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 CCDC148Q8NFR7 591 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 AFAP1L1Q8TED9 768 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 STAMQ92783 540 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 XAGE2Q96GT9 111 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 CAPZA3Q96KX2 299 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 PCDHB6Q9Y5E3 794 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 FAM237AA0A1B0GTK4 181 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 IDH1O75874 414 aaKnown RBP13.39□□□□□ -0.27
RBM39-202ENST00000338163 SSRP1Q08945 709 aaKnown RBP13.39□□□□□ -0.27
RBM39-202ENST00000338163 MICALL1Q8N3F8 863 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 NAA15Q9BXJ9 866 aaKnown RBP13.39□□□□□ -0.27
RBM39-202ENST00000338163 CWC25Q9NXE8 425 aaPredicted RBP13.39□□□□□ -0.27
RBM39-202ENST00000338163 TRIM10Q9UDY6 481 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 ZBTB1Q9Y2K1 713 aa13.39□□□□□ -0.27
RBM39-202ENST00000338163 PES1O00541 588 aaKnown RBP13.38□□□□□ -0.27
RBM39-202ENST00000338163 SH2B2O14492 632 aaPredicted RBP13.38□□□□□ -0.27
RBM39-202ENST00000338163 GYPCP04921 128 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 ZFYP08048 801 aaPredicted RBP13.38□□□□□ -0.27
RBM39-202ENST00000338163 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
RBM39-202ENST00000338163 RASGRP2Q7LDG7 609 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 GPATCH11Q8N954 259 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 PLBD2Q8NHP8 589 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 DEF6Q9H4E7 631 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 MED4Q9NPJ6 270 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 MYO6Q9UM54 1294 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 TTF2Q9UNY4 1162 aaKnown RBP13.38□□□□□ -0.27
RBM39-202ENST00000338163 SLC12A7Q9Y666 1083 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 TOB1P50616 345 aaPredicted RBP13.38□□□□□ -0.27
RBM39-202ENST00000338163 WHAMMP3Q1A5X7 153 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 CCDC57Q2TAC2 916 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 RRP12Q5JTH9 1297 aaKnown RBP13.38□□□□□ -0.27
RBM39-202ENST00000338163 TTLL7Q6ZT98 887 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 LRP10Q7Z4F1 713 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 CNGA4Q8IV77 575 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 GSPT2Q8IYD1 628 aaKnown RBP13.38□□□□□ -0.27
RBM39-202ENST00000338163 NBPF3Q9H094 633 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 CSRNP2Q9H175 543 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 VPS16Q9H269 839 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 HDAC6Q9UBN7 1215 aa13.38□□□□□ -0.27
RBM39-202ENST00000338163 FBXO2Q9UK22 296 aaPredicted RBP13.38□□□□□ -0.27
RBM39-202ENST00000338163 N4BP3O15049 544 aa13.37□□□□□ -0.27
RBM39-202ENST00000338163 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
RBM39-202ENST00000338163 CORO7P57737 925 aa13.37□□□□□ -0.27
RBM39-202ENST00000338163 LINC00116Q8NCU8 138 aa13.37□□□□□ -0.27
RBM39-202ENST00000338163 GPR108Q9NPR9 543 aa13.37□□□□□ -0.27
RBM39-202ENST00000338163 PAPPAQ13219 1627 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms