RNA–Protein interactions for RNA: ENST00000326407.10

ITM2C-201, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,888 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-201ENST00000326407 TMTC2Q8N394 836 aa19.15■□□□□ 0.66
ITM2C-201ENST00000326407 TSC1Q92574 1164 aa19.15■□□□□ 0.66
ITM2C-201ENST00000326407 OSBPL5Q9H0X9 879 aaPredicted RBP19.15■□□□□ 0.66
ITM2C-201ENST00000326407 TUBE1Q9UJT0 475 aa19.15■□□□□ 0.66
ITM2C-201ENST00000326407 CCDC88AQ3V6T2 1871 aa19.14■□□□□ 0.66
ITM2C-201ENST00000326407 UBE2Q2LH0YL09 131 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 SAFBQ15424 915 aaKnown RBP eCLIP19.14■□□□□ 0.65
ITM2C-201ENST00000326407 GRIPAP1Q4V328 841 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 SOGA3Q5TF21 947 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 FILIP1Q7Z7B0 1213 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 RIOK1Q9BRS2 568 aaKnown RBP19.14■□□□□ 0.65
ITM2C-201ENST00000326407 CCDC196A0A1B0GTZ2 297 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 IKBKBO14920 756 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 SKILP12757 684 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 TNNT1P13805 278 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 CCZ1BP86790 482 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 CCZ1P86791 482 aaPredicted RBP19.14■□□□□ 0.65
ITM2C-201ENST00000326407 ZNF710Q8N1W2 664 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 UBAC1Q9BSL1 405 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 PODXL2Q9NZ53 605 aa19.14■□□□□ 0.65
ITM2C-201ENST00000326407 ZNF219Q9P2Y4 722 aaPredicted RBP19.14■□□□□ 0.65
ITM2C-201ENST00000326407 SNED1Q8TER0 1413 aa19.13■□□□□ 0.65
ITM2C-201ENST00000326407 DEXIO95424 95 aa19.13■□□□□ 0.65
ITM2C-201ENST00000326407 GPSM2P81274 684 aa19.13■□□□□ 0.65
ITM2C-201ENST00000326407 NCAPHQ15003 741 aa19.13■□□□□ 0.65
ITM2C-201ENST00000326407 ANAPC4Q9UJX5 808 aa19.13■□□□□ 0.65
ITM2C-201ENST00000326407 XDHP47989 1333 aa19.13■□□□□ 0.65
ITM2C-201ENST00000326407 CTIFO43310 598 aaKnown RBP19.12■□□□□ 0.65
ITM2C-201ENST00000326407 GUCY1A2P33402 732 aa19.12■□□□□ 0.65
ITM2C-201ENST00000326407 CCDC93Q567U6 631 aa19.12■□□□□ 0.65
ITM2C-201ENST00000326407 ZNF654Q8IZM8 581 aa19.12■□□□□ 0.65
ITM2C-201ENST00000326407 KRI1Q8N9T8 703 aaKnown RBP19.12■□□□□ 0.65
ITM2C-201ENST00000326407 ESR2Q92731 530 aa19.12■□□□□ 0.65
ITM2C-201ENST00000326407 CLIC6Q96NY7 704 aa19.12■□□□□ 0.65
ITM2C-201ENST00000326407 XPO4Q9C0E2 1151 aaKnown RBP19.12■□□□□ 0.65
ITM2C-201ENST00000326407 FOXP1Q9H334 677 aaPredicted RBP19.12■□□□□ 0.65
ITM2C-201ENST00000326407 ANKIB1Q9P2G1 1089 aa19.12■□□□□ 0.65
ITM2C-201ENST00000326407 PDS5AQ29RF7 1337 aaKnown RBP19.12■□□□□ 0.65
ITM2C-201ENST00000326407 SMC2O95347 1197 aa19.11■□□□□ 0.65
ITM2C-201ENST00000326407 DIS3L2Q8IYB7 885 aaKnown RBP19.11■□□□□ 0.65
ITM2C-201ENST00000326407 RTKN2Q8IZC4 609 aa19.11■□□□□ 0.65
ITM2C-201ENST00000326407 CRACR2BQ8N4Y2 399 aaPredicted RBP19.11■□□□□ 0.65
ITM2C-201ENST00000326407 IFNKQ9P0W0 207 aa19.11■□□□□ 0.65
ITM2C-201ENST00000326407 PAXBP1Q9Y5B6 917 aa19.11■□□□□ 0.65
ITM2C-201ENST00000326407 BTBD18B2RXH4 712 aa19.11■□□□□ 0.65
ITM2C-201ENST00000326407 MECOMQ03112 1051 aa19.11■□□□□ 0.65
ITM2C-201ENST00000326407 DHX8Q14562 1220 aaKnown RBP19.11■□□□□ 0.65
ITM2C-201ENST00000326407 CCDC150Q8NCX0 1101 aa19.11■□□□□ 0.65
ITM2C-201ENST00000326407 KCND1Q9NSA2 647 aa19.11■□□□□ 0.65
ITM2C-201ENST00000326407 ARFGEF1Q9Y6D6 1849 aa19.11■□□□□ 0.65
ITM2C-201ENST00000326407 PNOCQ13519 176 aa19.1■□□□□ 0.65
ITM2C-201ENST00000326407 RILPL1Q5EBL4 403 aa19.1■□□□□ 0.65
ITM2C-201ENST00000326407 DPP8Q6V1X1 898 aaPredicted RBP19.1■□□□□ 0.65
ITM2C-201ENST00000326407 KRBA2Q6ZNG9 492 aa19.1■□□□□ 0.65
ITM2C-201ENST00000326407 ELOA2Q8IYF1 753 aaPredicted RBP19.1■□□□□ 0.65
ITM2C-201ENST00000326407 FANCBQ8NB91 859 aa19.1■□□□□ 0.65
ITM2C-201ENST00000326407 NSUN4Q96CB9 384 aaKnown RBP19.1■□□□□ 0.65
ITM2C-201ENST00000326407 KCNH3Q9ULD8 1083 aa19.1■□□□□ 0.65
ITM2C-201ENST00000326407 KCNJ14Q9UNX9 436 aa19.1■□□□□ 0.65
ITM2C-201ENST00000326407 LEMD3Q9Y2U8 911 aa19.1■□□□□ 0.65
ITM2C-201ENST00000326407 LTBP1Q14766 1721 aa19.1■□□□□ 0.65
ITM2C-201ENST00000326407 TOB1P50616 345 aaPredicted RBP19.09■□□□□ 0.65
ITM2C-201ENST00000326407 METTL16Q86W50 562 aaKnown RBP19.09■□□□□ 0.65
ITM2C-201ENST00000326407 ZNF384Q8TF68 577 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 NUP133Q8WUM0 1156 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 RTFDC1Q9BY42 306 aaPredicted RBP19.09■□□□□ 0.65
ITM2C-201ENST00000326407 GGA1Q9UJY5 639 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 CYP2D7A0A087X1C5 515 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 YBX3P16989 372 aaKnown RBP eCLIP19.09■□□□□ 0.657e-7■□□□□ 10.9
ITM2C-201ENST00000326407 ATP2B4P23634 1241 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 PPP2R5BQ15173 497 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 SEC23AQ15436 765 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 TMC6Q7Z403 805 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 CNNM3Q8NE01 707 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 TBC1D16Q8TBP0 767 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 CRNKL1Q9BZJ0 848 aaKnown RBP19.09■□□□□ 0.65
ITM2C-201ENST00000326407 POLLQ9UGP5 575 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 TNKSO95271 1327 aa19.09■□□□□ 0.65
ITM2C-201ENST00000326407 USP27XA6NNY8 438 aa19.08■□□□□ 0.65
ITM2C-201ENST00000326407 MYL5Q02045 173 aa19.08■□□□□ 0.65
ITM2C-201ENST00000326407 LONRF3Q496Y0 759 aa19.08■□□□□ 0.65
ITM2C-201ENST00000326407 CEP135Q66GS9 1140 aa19.08■□□□□ 0.65
ITM2C-201ENST00000326407 ISM2Q6H9L7 571 aa19.08■□□□□ 0.65
ITM2C-201ENST00000326407 NYAP1Q6ZVC0 841 aa19.08■□□□□ 0.65
ITM2C-201ENST00000326407 DZIP1Q86YF9 867 aaKnown RBP19.08■□□□□ 0.65
ITM2C-201ENST00000326407 PSMD1Q99460 953 aa19.08■□□□□ 0.65
ITM2C-201ENST00000326407 AATFQ9NY61 560 aaKnown RBP eCLIP19.08■□□□□ 0.65
ITM2C-201ENST00000326407 JAG2Q9Y219 1238 aa19.08■□□□□ 0.65
ITM2C-201ENST00000326407 LMOD1P29536 600 aaPredicted RBP19.07■□□□□ 0.64
ITM2C-201ENST00000326407 PRDX5P30044 214 aa19.07■□□□□ 0.64
ITM2C-201ENST00000326407 FANCCQ00597 558 aa19.07■□□□□ 0.64
ITM2C-201ENST00000326407 SPTY2D1Q68D10 685 aaPredicted RBP19.07■□□□□ 0.64
ITM2C-201ENST00000326407 CCAR2Q8N163 923 aaKnown RBP19.07■□□□□ 0.64
ITM2C-201ENST00000326407 RNF26Q9BY78 433 aaPredicted RBP19.07■□□□□ 0.64
ITM2C-201ENST00000326407 HSD3B7Q9H2F3 369 aa19.07■□□□□ 0.64
ITM2C-201ENST00000326407 HOOK1Q9UJC3 728 aaKnown RBP19.07■□□□□ 0.64
ITM2C-201ENST00000326407 FBXO2Q9UK22 296 aaPredicted RBP19.07■□□□□ 0.64
ITM2C-201ENST00000326407 MYO1BO43795 1136 aa19.07■□□□□ 0.64
ITM2C-201ENST00000326407 UFL1O94874 794 aa19.07■□□□□ 0.64
ITM2C-201ENST00000326407 PTPREP23469 700 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms