RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 USP17L5A8MUK1 530 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 NMT2O60551 498 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 RPS6KB1P23443 525 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 MCM5P33992 734 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 RAB3GAP1Q15042 981 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 RCSD1Q6JBY9 416 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 CCDC84Q86UT8 332 aaPredicted RBP14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 ERO1BQ86YB8 467 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 CLEC10AQ8IUN9 316 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 CNKSR2Q8WXI2 1034 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 ZSCAN10Q96SZ4 725 aaPredicted RBP14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 WDR18Q9BV38 432 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 ELP3Q9H9T3 547 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 NYAP2Q9P242 653 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 OTOFQ9HC10 1997 aa14.91□□□□□ -0.02
CHMP2A-201ENST00000312547 PRC1O43663 620 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 CPA1P15085 419 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 CASTP20810 708 aaKnown RBP14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 ICA1Q05084 483 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 PPATQ06203 517 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 SEC23AQ15436 765 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 CCDC178Q5BJE1 867 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 BLOC1S2Q6QNY1 142 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 CHST3Q7LGC8 479 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 IQCA1Q86XH1 822 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 DGKHQ86XP1 1220 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 IGDCC4Q8TDY8 1250 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 MKL1Q969V6 931 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 SLC10A4Q96EP9 437 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 ZKSCAN3Q9BRR0 538 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 TBC1D2Q9BYX2 928 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 ZHX2Q9Y6X8 837 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 TNKSO95271 1327 aa14.9□□□□□ -0.02
CHMP2A-201ENST00000312547 DOCK1Q14185 1865 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 A0A1W2PRG0 241 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 EEF2P13639 858 aaKnown RBP14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 GJA5P36382 358 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 PPIL2Q13356 520 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 PPP4R3BQ5MIZ7 849 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 RUFY3Q7L099 469 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 FBXL16Q8N461 479 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 ENAHQ8N8S7 591 aaPredicted RBP14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 ACER1Q8TDN7 264 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 TMEM87BQ96K49 555 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 TTC14Q96N46 770 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 UBAC1Q9BSL1 405 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 AGXT2Q9BYV1 514 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 UPF3BQ9BZI7 483 aaKnown RBP14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 SYNPO2Q9UMS6 1093 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 AFG3L2Q9Y4W6 797 aa14.89□□□□□ -0.03
CHMP2A-201ENST00000312547 RASSF10A6NK89 507 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 SH2B2O14492 632 aaPredicted RBP14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 TTLL1O95922 423 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 ECE1P42892 770 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 SPRYD7Q5W111 196 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 RGMBQ6NW40 437 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 RASAL3Q86YV0 1011 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 ZNF280CQ8ND82 737 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 OPTNQ96CV9 577 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 WNK4Q96J92 1243 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 TCEANC2Q96MN5 208 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 LY9Q9HBG7 655 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 AS3MTQ9HBK9 375 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 GPHNQ9NQX3 736 aaPredicted RBP14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 ABT1Q9ULW3 272 aaKnown RBP14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 KCNH4Q9UQ05 1017 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 TMX2Q9Y320 296 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 CYP46A1Q9Y6A2 500 aa14.88□□□□□ -0.03
CHMP2A-201ENST00000312547 CXCL11O14625 94 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 IFIT3O14879 490 aaKnown RBP14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 IRF6O14896 467 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 TOP1P11387 765 aaKnown RBP14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 SPP2Q13103 211 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 SART3Q15020 963 aaKnown RBP14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 TMEM67Q5HYA8 995 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 OTUD5Q96G74 571 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 TMEM47Q9BQJ4 181 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 LRRC2Q9BYS8 371 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 KIAA1683Q9H0B3 1180 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 ALDH8A1Q9H2A2 487 aaPredicted RBP14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 SENP2Q9HC62 589 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 ARHGEF10LQ9HCE6 1279 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 CLIP2Q9UDT6 1046 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 STX8Q9UNK0 236 aa14.87□□□□□ -0.03
CHMP2A-201ENST00000312547 FAM155AB1AL88 458 aaPredicted RBP14.86□□□□□ -0.03
CHMP2A-201ENST00000312547 SLC10A3P09131 477 aa14.86□□□□□ -0.03
CHMP2A-201ENST00000312547 ZBTB48P10074 688 aaPredicted RBP14.86□□□□□ -0.03
CHMP2A-201ENST00000312547 LIFRP42702 1097 aa14.86□□□□□ -0.03
CHMP2A-201ENST00000312547 ZNF157P51786 506 aaPredicted RBP14.86□□□□□ -0.03
CHMP2A-201ENST00000312547 BACE1P56817 501 aa14.86□□□□□ -0.03
CHMP2A-201ENST00000312547 RABEP1Q15276 862 aa14.86□□□□□ -0.03
CHMP2A-201ENST00000312547 SH3D19Q5HYK7 790 aa14.86□□□□□ -0.03
CHMP2A-201ENST00000312547 SGMS1Q86VZ5 419 aa14.86□□□□□ -0.03
CHMP2A-201ENST00000312547 ERICH2A1L162 156 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 TRIM75PA6NK02 468 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 USP17L10C9JJH3 530 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 MTMR2Q13614 643 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 WTAPQ15007 396 aa14.85□□□□□ -0.03
CHMP2A-201ENST00000312547 IFIT1BQ5T764 474 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms