RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 CTNNA1P35221 906 aaKnown RBP14.27□□□□□ -0.12
COL3A1-201ENST00000304636 LONRF2Q1L5Z9 754 aa14.27□□□□□ -0.12
COL3A1-201ENST00000304636 ADCK5Q3MIX3 580 aa14.27□□□□□ -0.12
COL3A1-201ENST00000304636 ZNF365Q70YC5 407 aa14.27□□□□□ -0.12
COL3A1-201ENST00000304636 CABP7Q86V35 215 aa14.27□□□□□ -0.12
COL3A1-201ENST00000304636 TMEM87AQ8NBN3 555 aa14.27□□□□□ -0.12
COL3A1-201ENST00000304636 STAMQ92783 540 aa14.27□□□□□ -0.12
COL3A1-201ENST00000304636 RRP15Q9Y3B9 282 aaKnown RBP14.27□□□□□ -0.12
COL3A1-201ENST00000304636 H7C1D1 291 aa14.27□□□□□ -0.13
COL3A1-201ENST00000304636 ZAP70P43403 619 aa14.27□□□□□ -0.13
COL3A1-201ENST00000304636 ST5P78524 1137 aa14.27□□□□□ -0.13
COL3A1-201ENST00000304636 EDC3Q96F86 508 aaKnown RBP14.27□□□□□ -0.13
COL3A1-201ENST00000304636 PARP2Q9UGN5 583 aa14.27□□□□□ -0.13
COL3A1-201ENST00000304636 BAIAP2L1Q9UHR4 511 aa14.27□□□□□ -0.13
COL3A1-201ENST00000304636 PCDH11XQ9BZA7 1347 aa14.27□□□□□ -0.13
COL3A1-201ENST00000304636 PCDH11YQ9BZA8 1340 aa14.27□□□□□ -0.13
COL3A1-201ENST00000304636 MSANTD4Q8NCY6 345 aa14.27□□□□□ -0.13
COL3A1-201ENST00000304636 HAUS7Q99871 368 aa14.27□□□□□ -0.13
COL3A1-201ENST00000304636 CLIC4Q9Y696 253 aa14.27□□□□□ -0.13
COL3A1-201ENST00000304636 SEC31AO94979 1220 aaKnown RBP14.26□□□□□ -0.13
COL3A1-201ENST00000304636 RFC4P35249 363 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 DENND2CQ68D51 928 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 C11orf57Q6ZUT1 292 aaPredicted RBP14.26□□□□□ -0.13
COL3A1-201ENST00000304636 FAM207AQ9NSI2 230 aaPredicted RBP14.26□□□□□ -0.13
COL3A1-201ENST00000304636 STK24Q9Y6E0 443 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 ZNF532Q9HCE3 1301 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 NEURL1BA8MQ27 555 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 PDIA3P30101 505 aaKnown RBP14.26□□□□□ -0.13
COL3A1-201ENST00000304636 FEZ2Q9UHY8 353 aaPredicted RBP14.26□□□□□ -0.13
COL3A1-201ENST00000304636 ANAPC4Q9UJX5 808 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 HSPD1P10809 573 aaKnown RBP14.26□□□□□ -0.13
COL3A1-201ENST00000304636 LIG3P49916 1009 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 AKNAD1Q5T1N1 836 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 LPIN2Q92539 896 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 VCXQ9H320 206 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 FAM204AQ9H8W3 233 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 INF2Q27J81 1249 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 WDR66Q8TBY9 1149 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 VPS54Q9P1Q0 977 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 ERBB4Q15303 1308 aa14.26□□□□□ -0.13
COL3A1-201ENST00000304636 GNA14O95837 355 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 FBXO18Q8NFZ0 1043 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 GLT8D2Q9H1C3 349 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 EPN1Q9Y6I3 576 aaPredicted RBP14.25□□□□□ -0.13
COL3A1-201ENST00000304636 PPP6R2O75170 966 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 GUCY2FP51841 1108 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 ARHGAP24Q8N264 748 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 SNX29Q8TEQ0 813 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 EXOC4Q96A65 974 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 LZTS2Q9BRK4 669 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 TXNDC16Q9P2K2 825 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 SLC8A1P32418 973 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 UNC5CLQ8IV45 518 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 EFCAB13Q8IY85 973 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 SLC52A2Q9HAB3 445 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 POLR3EQ9NVU0 708 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 COMMD10Q9Y6G5 202 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 PDE8AO60658 829 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 MCUR1Q96AQ8 359 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 CTTNBP2NLQ9P2B4 639 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 DISP1Q96F81 1524 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 CCDC97Q96F63 343 aaPredicted RBP14.25□□□□□ -0.13
COL3A1-201ENST00000304636 ASIC3Q9UHC3 531 aa14.25□□□□□ -0.13
COL3A1-201ENST00000304636 NSFL1CQ9UNZ2 370 aaKnown RBP14.25□□□□□ -0.13
COL3A1-201ENST00000304636 CCDC151A5D8V7 595 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 TAF5LO75529 589 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 PLS1Q14651 629 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 SLC39A14Q15043 492 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 PPP2R5EQ16537 467 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 CFAP157Q5JU67 520 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 CLCN6P51797 869 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 CCDC38Q502W7 563 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 HERC4Q5GLZ8 1057 aaPredicted RBP14.24□□□□□ -0.13
COL3A1-201ENST00000304636 SPATA5Q8NB90 893 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 PPP1R12CQ9BZL4 782 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 RCOR1Q9UKL0 485 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 RGS16O15492 202 aaPredicted RBP14.24□□□□□ -0.13
COL3A1-201ENST00000304636 ZNF827Q17R98 1081 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 MAP7D1Q3KQU3 841 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 DPCR1Q3MIW9 517 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 GKAP1Q5VSY0 366 aaPredicted RBP14.24□□□□□ -0.13
COL3A1-201ENST00000304636 DYMQ7RTS9 669 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 PPP1R1BQ9UD71 204 aaPredicted RBP14.24□□□□□ -0.13
COL3A1-201ENST00000304636 GTPBP6O43824 516 aaPredicted RBP14.24□□□□□ -0.13
COL3A1-201ENST00000304636 NOL3O60936 208 aaKnown RBP14.24□□□□□ -0.13
COL3A1-201ENST00000304636 RNF40O75150 1001 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 PRDM1O75626 825 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 ZNF654Q8IZM8 581 aa14.24□□□□□ -0.13
COL3A1-201ENST00000304636 RASSF2P50749 326 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 ATP1A2P50993 1020 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 ZNF131P52739 623 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 RNF10Q8N5U6 811 aaKnown RBP14.23□□□□□ -0.13
COL3A1-201ENST00000304636 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.23□□□□□ -0.13
COL3A1-201ENST00000304636 ARHGEF2Q92974 986 aaKnown RBP14.23□□□□□ -0.13
COL3A1-201ENST00000304636 MYOM2P54296 1465 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 HHATQ5VTY9 493 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 CCDC62Q6P9F0 684 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 CCDC105Q8IYK2 499 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.23□□□□□ -0.13
COL3A1-201ENST00000304636 CLIC6Q96NY7 704 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms