RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 DAGLAQ9Y4D2 1042 aa22.38■■□□□ 1.17
HOXC4-201ENST00000303406 A0A1B0GVL5 298 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 NMT2O60551 498 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 WDHD1O75717 1129 aaPredicted RBP22.37■■□□□ 1.17
HOXC4-201ENST00000303406 TSPY3P0CV98 308 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 TSPY8P0CW00 308 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 RASA1P20936 1047 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 KRT2P35908 639 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 FKBP1AP62942 108 aaKnown RBP22.37■■□□□ 1.17
HOXC4-201ENST00000303406 GRM4Q14833 912 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 CCDC82Q8N4S0 544 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 SRBD1Q8N5C6 995 aaKnown RBP22.37■■□□□ 1.17
HOXC4-201ENST00000303406 DYNLL2Q96FJ2 89 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 CBX8Q9HC52 389 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 ANO10Q9NW15 660 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 V9GY48 417 aaPredicted RBP22.37■■□□□ 1.17
HOXC4-201ENST00000303406 SNED1Q8TER0 1413 aa22.37■■□□□ 1.17
HOXC4-201ENST00000303406 ADCY5O95622 1261 aa22.36■■□□□ 1.17
HOXC4-201ENST00000303406 PLCD1P51178 756 aa22.36■■□□□ 1.17
HOXC4-201ENST00000303406 RESP18Q5W5W9 173 aa22.36■■□□□ 1.17
HOXC4-201ENST00000303406 ELOA2Q8IYF1 753 aaPredicted RBP22.36■■□□□ 1.17
HOXC4-201ENST00000303406 RIMBP2O15034 1052 aa22.36■■□□□ 1.17
HOXC4-201ENST00000303406 BMP15O95972 392 aa22.36■■□□□ 1.17
HOXC4-201ENST00000303406 PFKFB1P16118 471 aa22.36■■□□□ 1.17
HOXC4-201ENST00000303406 TOB1P50616 345 aaPredicted RBP22.36■■□□□ 1.17
HOXC4-201ENST00000303406 PODNQ7Z5L7 613 aa22.36■■□□□ 1.17
HOXC4-201ENST00000303406 C2CD5Q86YS7 1000 aa22.36■■□□□ 1.17
HOXC4-201ENST00000303406 KRI1Q8N9T8 703 aaKnown RBP22.36■■□□□ 1.17
HOXC4-201ENST00000303406 PNMA1Q8ND90 353 aa22.36■■□□□ 1.17
HOXC4-201ENST00000303406 NEDD1Q8NHV4 660 aa22.36■■□□□ 1.17
HOXC4-201ENST00000303406 LZTS2Q9BRK4 669 aa22.36■■□□□ 1.17
HOXC4-201ENST00000303406 C10orf71Q711Q0 1435 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 PLIN4Q96Q06 1357 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 H0YIN7 160 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 ZNF202O95125 648 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 NOVP48745 357 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 CDK8P49336 464 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 ZNF165P49910 485 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 SLC15A2Q16348 729 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 PFKFB3Q16875 520 aaPredicted RBP22.35■■□□□ 1.17
HOXC4-201ENST00000303406 HHIPL2Q6UWX4 724 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 ZNF579Q8NAF0 562 aaKnown RBP22.35■■□□□ 1.17
HOXC4-201ENST00000303406 SDF4Q9BRK5 362 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 MRIQ9BWK5 157 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 SH3GLB2Q9NR46 395 aa22.35■■□□□ 1.17
HOXC4-201ENST00000303406 MYO3BQ8WXR4 1341 aa22.34■■□□□ 1.17
HOXC4-201ENST00000303406 SCG2P13521 617 aa22.34■■□□□ 1.17
HOXC4-201ENST00000303406 PTPREP23469 700 aa22.34■■□□□ 1.17
HOXC4-201ENST00000303406 MARCKSP29966 332 aaPredicted RBP22.34■■□□□ 1.17
HOXC4-201ENST00000303406 SHC4Q6S5L8 630 aa22.34■■□□□ 1.17
HOXC4-201ENST00000303406 SHISA4Q96DD7 197 aa22.34■■□□□ 1.17
HOXC4-201ENST00000303406 RTN4Q9NQC3 1192 aaKnown RBP22.34■■□□□ 1.17
HOXC4-201ENST00000303406 VPS54Q9P1Q0 977 aa22.34■■□□□ 1.17
HOXC4-201ENST00000303406 SAP30BPQ9UHR5 308 aaKnown RBP22.34■■□□□ 1.17
HOXC4-201ENST00000303406 CERS5Q8N5B7 392 aa22.33■■□□□ 1.17
HOXC4-201ENST00000303406 TNFRSF25Q93038 417 aa22.33■■□□□ 1.17
HOXC4-201ENST00000303406 CNKSR1Q969H4 720 aa22.33■■□□□ 1.17
HOXC4-201ENST00000303406 CAMKK2Q96RR4 588 aa22.33■■□□□ 1.17
HOXC4-201ENST00000303406 DNAJC25Q9H1X3 360 aa22.33■■□□□ 1.17
HOXC4-201ENST00000303406 STK32BQ9NY57 414 aa22.33■■□□□ 1.17
HOXC4-201ENST00000303406 KIAA1468Q9P260 1216 aa22.33■■□□□ 1.17
HOXC4-201ENST00000303406 SYKP43405 635 aa22.32■■□□□ 1.16
HOXC4-201ENST00000303406 NR5A1Q13285 461 aa22.32■■□□□ 1.16
HOXC4-201ENST00000303406 OXER1Q8TDS5 423 aa22.32■■□□□ 1.16
HOXC4-201ENST00000303406 ZNF622Q969S3 477 aaKnown RBP eCLIP22.32■■□□□ 1.16
HOXC4-201ENST00000303406 TAOK2Q9UL54 1235 aa22.32■■□□□ 1.16
HOXC4-201ENST00000303406 ZKSCAN5Q9Y2L8 839 aa22.32■■□□□ 1.16
HOXC4-201ENST00000303406 MSNP26038 577 aaKnown RBP22.31■■□□□ 1.16
HOXC4-201ENST00000303406 CALML3P27482 149 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 SMARCA1P28370 1054 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 IQCB1Q15051 598 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 CC2D2BQ6DHV5 1058 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 FBXO2Q9UK22 296 aaPredicted RBP22.31■■□□□ 1.16
HOXC4-201ENST00000303406 TTF2Q9UNY4 1162 aaKnown RBP22.31■■□□□ 1.16
HOXC4-201ENST00000303406 SRPRBQ9Y5M8 271 aaKnown RBP22.31■■□□□ 1.16
HOXC4-201ENST00000303406 USP17L3A6NCW0 530 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 USP17L4A6NCW7 530 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 TRAPPC10P48553 1259 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 HDLBPQ00341 1268 aaKnown RBP22.31■■□□□ 1.16
HOXC4-201ENST00000303406 GABPAQ06546 454 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 NPY5RQ15761 445 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 MSL1Q68DK7 614 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 USP17L1Q7RTZ2 530 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 LUZP1Q86V48 1076 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 SLC44A5Q8NCS7 719 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 TMEM47Q9BQJ4 181 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 BPIFA3Q9BQP9 254 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 NAT10Q9H0A0 1025 aaKnown RBP22.31■■□□□ 1.16
HOXC4-201ENST00000303406 MAD2L2Q9UI95 211 aa22.31■■□□□ 1.16
HOXC4-201ENST00000303406 ZNF646O15015 1829 aaPredicted RBP22.3■■□□□ 1.16
HOXC4-201ENST00000303406 EP400Q96L91 3159 aa22.3■■□□□ 1.16
HOXC4-201ENST00000303406 PALM3A6NDB9 673 aaPredicted RBP22.3■■□□□ 1.16
HOXC4-201ENST00000303406 TRIM75PA6NK02 468 aa22.3■■□□□ 1.16
HOXC4-201ENST00000303406 G3V3G9 751 aa22.3■■□□□ 1.16
HOXC4-201ENST00000303406 PTMAP06454 111 aaKnown RBP22.3■■□□□ 1.16
HOXC4-201ENST00000303406 TPM3P06753 285 aa22.3■■□□□ 1.16
HOXC4-201ENST00000303406 DCAF8Q5TAQ9 597 aa22.3■■□□□ 1.16
HOXC4-201ENST00000303406 CEP57L1Q8IYX8 460 aa22.3■■□□□ 1.16
HOXC4-201ENST00000303406 ANO8Q9HCE9 1232 aaPredicted RBP22.3■■□□□ 1.16
HOXC4-201ENST00000303406 CABP5Q9NP86 173 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms