RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 GABPB2Q8TAK5 448 aaPredicted RBP18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 ZSCAN10Q96SZ4 725 aaPredicted RBP18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 CTTNBP2NLQ9P2B4 639 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 KCNQ3O43525 872 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 CD19P15391 556 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 ATP5DP30049 168 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 DCUN1D2Q6PH85 259 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 CCDC84Q86UT8 332 aaPredicted RBP18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 NELFCDQ8IXH7 590 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 IFNL3Q8IZI9 196 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 NLGN1Q8N2Q7 840 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 NFE2L3Q9Y4A8 694 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 KDM2BQ8NHM5 1336 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 RRAGDQ9NQL2 400 aaPredicted RBP18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 NKIRAS1Q9NYS0 192 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 INSRP06213 1382 aa18.73■□□□□ 0.59
CROCCP3-201ENST00000263511 KRT19P08727 400 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 RAD51AP2Q09MP3 1159 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 MIER3Q7Z3K6 550 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 TPH2Q8IWU9 490 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 ZFYVE16Q7Z3T8 1539 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 PDE6AP16499 860 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 CCDC121Q6ZUS5 278 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 PROCA1Q8NCQ7 364 aaPredicted RBP18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 DDX23Q9BUQ8 820 aaKnown RBP18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 TMTC1Q8IUR5 882 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 JAK2O60674 1132 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 CAPN2P17655 700 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 PPP1R21Q6ZMI0 780 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 PNMA2Q9UL42 364 aa18.72■□□□□ 0.59
CROCCP3-201ENST00000263511 CDC37L1Q7L3B6 337 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 NELFBQ8WX92 580 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 ZNF274Q96GC6 653 aaPredicted RBP18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 NACA2Q9H009 215 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 TAB2Q9NYJ8 693 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 FLOT1O75955 427 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 C8orf74Q6P047 294 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 SECISBP2LQ93073 1101 aaKnown RBP18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 UIMC1Q96RL1 719 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 ANAPC4Q9UJX5 808 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 CLUL1Q15846 466 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 GPR162Q16538 588 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 GPATCH11Q8N954 259 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 SAMD15Q9P1V8 674 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 MRPL11Q9Y3B7 192 aaKnown RBP18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 MAP3K15Q6ZN16 1313 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 BCAMP50895 628 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 PPP2R3AQ06190 1150 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 PABPC4Q13310 644 aaKnown RBP eCLIP18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 SETDB1Q15047 1291 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 UAP1Q16222 522 aaPredicted RBP18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 ABCC4O15439 1325 aa18.71■□□□□ 0.59
CROCCP3-201ENST00000263511 LOC102724428A0A0B4J2F2 783 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 ZEB2O60315 1214 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 PRPF6O94906 941 aaKnown RBP18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 SIK1P57059 783 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 KIAA0825Q8IV33 1275 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 SMC1BQ8NDV3 1235 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 DEPTORQ8TB45 409 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 PAGR1Q9BTK6 254 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 MAGEA1P43355 309 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 MLXIPQ9HAP2 919 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 P4HA1P13674 534 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 KLHL30Q0D2K2 578 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 UTP14CQ5TAP6 766 aaKnown RBP18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 ARHGEF16Q5VV41 709 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 HDXQ7Z353 690 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 CCDC125Q86Z20 511 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 GTF3C6Q969F1 213 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 HAUS7Q99871 368 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 PSTPIP2Q9H939 334 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 YWHAEP62258 255 aaKnown RBP18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 CHRNDQ07001 517 aa18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 CERKLQ49MI3 558 aaPredicted RBP18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 NUCKS1Q9H1E3 243 aaKnown RBP18.7■□□□□ 0.58
CROCCP3-201ENST00000263511 BEND3Q5T5X7 828 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 BLIDQ8IZY5 108 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 EAF2Q96CJ1 260 aaPredicted RBP18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 VPS18Q9P253 973 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 TESPA1A2RU30 521 aaPredicted RBP18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 EBAG9O00559 213 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 GNA14O95837 355 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 ALAS1P13196 640 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 EVCP57679 992 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 NBPF11Q86T75 865 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 UTP11Q9Y3A2 253 aaKnown RBP18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 USPL1Q5W0Q7 1092 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 PNMA1Q8ND90 353 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 IQCDQ96DY2 449 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 IMPACTQ9P2X3 320 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 TRPC5Q9UL62 973 aaPredicted RBP18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 BTDP43251 543 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 DNAJC21Q5F1R6 531 aaKnown RBP18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 MYSM1Q5VVJ2 828 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 CBX8Q9HC52 389 aa18.69■□□□□ 0.58
CROCCP3-201ENST00000263511 TCP10L2B9ZVM9 353 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms