RNA–Protein interactions for RNA: ENST00000256001.12

ACTR3B-201, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3B, Length 2,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-201ENST00000256001 LONRF3Q496Y0 759 aa29.51■■■□□ 2.31
ACTR3B-201ENST00000256001 RCSD1Q6JBY9 416 aa29.51■■■□□ 2.31
ACTR3B-201ENST00000256001 AMOTL1Q8IY63 956 aa29.51■■■□□ 2.31
ACTR3B-201ENST00000256001 CEP131Q9UPN4 1083 aa29.51■■■□□ 2.31
ACTR3B-201ENST00000256001 GRIN1Q05586 938 aa29.51■■■□□ 2.31
ACTR3B-201ENST00000256001 ISM2Q6H9L7 571 aa29.51■■■□□ 2.31
ACTR3B-201ENST00000256001 BPIFA3Q9BQP9 254 aa29.51■■■□□ 2.31
ACTR3B-201ENST00000256001 IL1R1P14778 569 aa29.5■■■□□ 2.31
ACTR3B-201ENST00000256001 HOXA10P31260 410 aaPredicted RBP29.5■■■□□ 2.31
ACTR3B-201ENST00000256001 KIAA1524Q8TCG1 905 aa29.5■■■□□ 2.31
ACTR3B-201ENST00000256001 MRFAP1L1Q96HT8 127 aa29.5■■■□□ 2.31
ACTR3B-201ENST00000256001 MKNK2Q9HBH9 465 aa29.5■■■□□ 2.31
ACTR3B-201ENST00000256001 FAM205CA6NFA0 338 aa29.49■■■□□ 2.31
ACTR3B-201ENST00000256001 PNOCQ13519 176 aa29.49■■■□□ 2.31
ACTR3B-201ENST00000256001 KRBA2Q6ZNG9 492 aa29.49■■■□□ 2.31
ACTR3B-201ENST00000256001 CNNM3Q8NE01 707 aa29.49■■■□□ 2.31
ACTR3B-201ENST00000256001 RTFDC1Q9BY42 306 aaPredicted RBP29.49■■■□□ 2.31
ACTR3B-201ENST00000256001 POLLQ9UGP5 575 aa29.49■■■□□ 2.31
ACTR3B-201ENST00000256001 TUBE1Q9UJT0 475 aa29.49■■■□□ 2.31
ACTR3B-201ENST00000256001 TXNRD1Q16881 649 aa29.49■■■□□ 2.31
ACTR3B-201ENST00000256001 KAT14Q9H8E8 782 aa29.49■■■□□ 2.31
ACTR3B-201ENST00000256001 FAM13BQ9NYF5 915 aa29.49■■■□□ 2.31
ACTR3B-201ENST00000256001 DNTTIP2Q5QJE6 756 aaKnown RBP29.48■■■□□ 2.31
ACTR3B-201ENST00000256001 MAPKAPK5Q8IW41 473 aa29.48■■■□□ 2.31
ACTR3B-201ENST00000256001 PROM2Q8N271 834 aa29.48■■■□□ 2.31
ACTR3B-201ENST00000256001 TBC1D16Q8TBP0 767 aa29.48■■■□□ 2.31
ACTR3B-201ENST00000256001 BRMS1Q9HCU9 246 aa29.48■■■□□ 2.31
ACTR3B-201ENST00000256001 IL17RBQ9NRM6 502 aa29.48■■■□□ 2.31
ACTR3B-201ENST00000256001 PODXL2Q9NZ53 605 aa29.48■■■□□ 2.31
ACTR3B-201ENST00000256001 EARS2Q5JPH6 523 aaKnown RBP29.48■■■□□ 2.31
ACTR3B-201ENST00000256001 CRAMP1Q96RY5 1269 aa29.48■■■□□ 2.31
ACTR3B-201ENST00000256001 BTDP43251 543 aa29.47■■■□□ 2.31
ACTR3B-201ENST00000256001 METTL16Q86W50 562 aaKnown RBP29.47■■■□□ 2.31
ACTR3B-201ENST00000256001 SPTLC3Q9NUV7 552 aa29.47■■■□□ 2.31
ACTR3B-201ENST00000256001 SAP30BPQ9UHR5 308 aaKnown RBP29.47■■■□□ 2.31
ACTR3B-201ENST00000256001 SRPRBQ9Y5M8 271 aaKnown RBP29.47■■■□□ 2.31
ACTR3B-201ENST00000256001 TRIM75PA6NK02 468 aa29.47■■■□□ 2.31
ACTR3B-201ENST00000256001 C6orf229H3BNL8 230 aa29.47■■■□□ 2.31
ACTR3B-201ENST00000256001 DGKHQ86XP1 1220 aa29.47■■■□□ 2.31
ACTR3B-201ENST00000256001 ROBO3Q96MS0 1386 aa29.46■■■□□ 2.31
ACTR3B-201ENST00000256001 KIF5BP33176 963 aa29.46■■■□□ 2.31
ACTR3B-201ENST00000256001 PLCD1P51178 756 aa29.46■■■□□ 2.31
ACTR3B-201ENST00000256001 BRWD3Q6RI45 1802 aa29.46■■■□□ 2.31
ACTR3B-201ENST00000256001 LRMPQ12912 555 aa29.45■■■□□ 2.31
ACTR3B-201ENST00000256001 CCDC144BQ3MJ40 725 aa29.45■■■□□ 2.31
ACTR3B-201ENST00000256001 MFSD14BQ5SR56 506 aa29.45■■■□□ 2.31
ACTR3B-201ENST00000256001 ZNF579Q8NAF0 562 aaKnown RBP29.45■■■□□ 2.31
ACTR3B-201ENST00000256001 SCG2P13521 617 aa29.45■■■□□ 2.3
ACTR3B-201ENST00000256001 NT5C2P49902 561 aa29.45■■■□□ 2.3
ACTR3B-201ENST00000256001 ZNF444Q8N0Y2 327 aaPredicted RBP29.45■■■□□ 2.3
ACTR3B-201ENST00000256001 SLC44A5Q8NCS7 719 aa29.45■■■□□ 2.3
ACTR3B-201ENST00000256001 PNMA1Q8ND90 353 aa29.45■■■□□ 2.3
ACTR3B-201ENST00000256001 KLRG2A4D1S0 409 aaPredicted RBP29.44■■■□□ 2.3
ACTR3B-201ENST00000256001 TSPY3P0CV98 308 aa29.44■■■□□ 2.3
ACTR3B-201ENST00000256001 TSPY8P0CW00 308 aa29.44■■■□□ 2.3
ACTR3B-201ENST00000256001 NPY5RQ15761 445 aa29.44■■■□□ 2.3
ACTR3B-201ENST00000256001 GPR75-ASB3A0A0A6YYF3 556 aa29.44■■■□□ 2.3
ACTR3B-201ENST00000256001 USP17L3A6NCW0 530 aa29.44■■■□□ 2.3
ACTR3B-201ENST00000256001 USP17L4A6NCW7 530 aa29.44■■■□□ 2.3
ACTR3B-201ENST00000256001 TERF1P54274 439 aa29.44■■■□□ 2.3
ACTR3B-201ENST00000256001 USP17L1Q7RTZ2 530 aa29.44■■■□□ 2.3
ACTR3B-201ENST00000256001 CERS3Q8IU89 383 aa29.44■■■□□ 2.3
ACTR3B-201ENST00000256001 POLR2DO15514 142 aaKnown RBP29.43■■■□□ 2.3
ACTR3B-201ENST00000256001 TPM2P07951 284 aa29.43■■■□□ 2.3
ACTR3B-201ENST00000256001 CSRNP2Q9H175 543 aa29.43■■■□□ 2.3
ACTR3B-201ENST00000256001 SMTNL1A8MU46 457 aa29.43■■■□□ 2.3
ACTR3B-201ENST00000256001 PFKFB3Q16875 520 aaPredicted RBP29.43■■■□□ 2.3
ACTR3B-201ENST00000256001 FOXP4Q8IVH2 680 aaPredicted RBP29.43■■■□□ 2.3
ACTR3B-201ENST00000256001 TEX11Q8IYF3 940 aa29.43■■■□□ 2.3
ACTR3B-201ENST00000256001 FOXN1O15353 648 aa29.42■■■□□ 2.3
ACTR3B-201ENST00000256001 NLRP5P59047 1200 aa29.42■■■□□ 2.3
ACTR3B-201ENST00000256001 TPM4P67936 248 aa29.42■■■□□ 2.3
ACTR3B-201ENST00000256001 NOM1Q5C9Z4 860 aaKnown RBP29.42■■■□□ 2.3
ACTR3B-201ENST00000256001 ANKS1AQ92625 1134 aa29.42■■■□□ 2.3
ACTR3B-201ENST00000256001 TNFRSF25Q93038 417 aa29.42■■■□□ 2.3
ACTR3B-201ENST00000256001 BAZ2BQ9UIF8 2168 aaKnown RBP29.42■■■□□ 2.3
ACTR3B-201ENST00000256001 HOOK1Q9UJC3 728 aaKnown RBP29.42■■■□□ 2.3
ACTR3B-201ENST00000256001 PCDHA5Q9Y5H7 936 aa29.42■■■□□ 2.3
ACTR3B-201ENST00000256001 PPEF1O14829 653 aaPredicted RBP29.41■■■□□ 2.3
ACTR3B-201ENST00000256001 VEGFAP15692 232 aaPredicted RBP29.41■■■□□ 2.3
ACTR3B-201ENST00000256001 CCDC178Q5BJE1 867 aa29.41■■■□□ 2.3
ACTR3B-201ENST00000256001 NAV1Q8NEY1 1877 aa29.41■■■□□ 2.3
ACTR3B-201ENST00000256001 NCAPHQ15003 741 aa29.41■■■□□ 2.3
ACTR3B-201ENST00000256001 ELOA2Q8IYF1 753 aaPredicted RBP29.41■■■□□ 2.3
ACTR3B-201ENST00000256001 TBC1D22AQ8WUA7 517 aa29.41■■■□□ 2.3
ACTR3B-201ENST00000256001 CACTINQ8WUQ7 758 aaKnown RBP29.41■■■□□ 2.3
ACTR3B-201ENST00000256001 MDM2Q00987 491 aaPredicted RBP29.4■■■□□ 2.3
ACTR3B-201ENST00000256001 SP8Q8IXZ3 490 aa29.4■■■□□ 2.3
ACTR3B-201ENST00000256001 SERTAD1Q9UHV2 236 aa29.4■■■□□ 2.3
ACTR3B-201ENST00000256001 PLCG2P16885 1265 aa29.4■■■□□ 2.3
ACTR3B-201ENST00000256001 USP49Q70CQ1 688 aa29.4■■■□□ 2.3
ACTR3B-201ENST00000256001 SLF2Q8IX21 1173 aa29.4■■■□□ 2.3
ACTR3B-201ENST00000256001 STAG2Q8N3U4 1231 aa29.4■■■□□ 2.3
ACTR3B-201ENST00000256001 PDILTQ8N807 584 aa29.4■■■□□ 2.3
ACTR3B-201ENST00000256001 TCP11L1Q9NUJ3 509 aa29.4■■■□□ 2.3
ACTR3B-201ENST00000256001 WNT7AO00755 349 aa29.39■■■□□ 2.3
ACTR3B-201ENST00000256001 RASA1P20936 1047 aa29.39■■■□□ 2.3
ACTR3B-201ENST00000256001 TMC4Q7Z404 712 aa29.39■■■□□ 2.3
ACTR3B-201ENST00000256001 ZNF287Q9HBT7 754 aa29.39■■■□□ 2.3
ACTR3B-201ENST00000256001 IKBKBO14920 756 aa29.39■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms