RNA–Protein interactions for RNA: ENSMUST00000174592.7

Ccdc28a-205, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-205ENSMUST00000174592 Romo1P60603 79 aa4.14□□□□□ -1.75
Ccdc28a-205ENSMUST00000174592 Mt2P02798 61 aa4.08□□□□□ -1.76
Ccdc28a-205ENSMUST00000174592 CriptO70333 101 aa4.07□□□□□ -1.76
Ccdc28a-205ENSMUST00000174592 Gm11639A0A1D5RLM8 5808 aa4.05□□□□□ -1.76
Ccdc28a-205ENSMUST00000174592 Sprr2a3Q4KL71 83 aa4.04□□□□□ -1.76
Ccdc28a-205ENSMUST00000174592 Sprr2a1Q9CQK8 83 aa4.04□□□□□ -1.76
Ccdc28a-205ENSMUST00000174592 Lce1iQ9D6P5 149 aa4.04□□□□□ -1.76
Ccdc28a-205ENSMUST00000174592 Spink7Q6IE32 76 aa4.02□□□□□ -1.77
Ccdc28a-205ENSMUST00000174592 Macf1Q9QXZ0 7354 aaKnown RBP3.99□□□□□ -1.77
Ccdc28a-205ENSMUST00000174592 Gm11559Q9D3H7 191 aa3.96□□□□□ -1.78
Ccdc28a-205ENSMUST00000174592 Lce1a2Q9D1K4 149 aa3.94□□□□□ -1.78
Ccdc28a-205ENSMUST00000174592 Krtap22-2J3QNX6 67 aa3.92□□□□□ -1.78
Ccdc28a-205ENSMUST00000174592 Gpr98Q8VHN7 6298 aaKnown RBP3.86□□□□□ -1.79
Ccdc28a-205ENSMUST00000174592 Gm40193A0A1B0GT39 78 aa3.82□□□□□ -1.8
Ccdc28a-205ENSMUST00000174592 Camk2n1Q6QWF9 78 aa3.82□□□□□ -1.8
Ccdc28a-205ENSMUST00000174592 Gm11554B1AQB2 190 aa3.81□□□□□ -1.8
Ccdc28a-205ENSMUST00000174592 Muc19Q6PZE0 7524 aa3.8□□□□□ -1.8
Ccdc28a-205ENSMUST00000174592 Krtap7-1Q9D3I6 87 aa3.76□□□□□ -1.81
Ccdc28a-205ENSMUST00000174592 Kmt2dQ6PDK2 5588 aa3.76□□□□□ -1.81
Ccdc28a-205ENSMUST00000174592 Mp68P56379 58 aa3.72□□□□□ -1.81
Ccdc28a-205ENSMUST00000174592 Lce1kJ3QP15 125 aa3.71□□□□□ -1.82
Ccdc28a-205ENSMUST00000174592 Krtap5-2Q9D5Z7 189 aa3.71□□□□□ -1.82
Ccdc28a-205ENSMUST00000174592 Gm10100J3QK64 120 aa3.64□□□□□ -1.83
Ccdc28a-205ENSMUST00000174592 Sprr2iO70560 76 aa3.64□□□□□ -1.83
Ccdc28a-205ENSMUST00000174592 Gm4553A0A1B0GSA9 284 aa3.62□□□□□ -1.83
Ccdc28a-205ENSMUST00000174592 Gm20538F6Z9R1 75 aa3.58□□□□□ -1.84
Ccdc28a-205ENSMUST00000174592 Lce1cQ9D1C5 147 aa3.57□□□□□ -1.84
Ccdc28a-205ENSMUST00000174592 DstQ91ZU6 7393 aaKnown RBP3.56□□□□□ -1.84
Ccdc28a-205ENSMUST00000174592 Krtap19-9bQ99NG9 58 aa3.56□□□□□ -1.84
Ccdc28a-205ENSMUST00000174592 Lce1fB9EJP6 147 aa3.55□□□□□ -1.84
Ccdc28a-205ENSMUST00000174592 Gm2431E9Q8S1 172 aa3.55□□□□□ -1.84
Ccdc28a-205ENSMUST00000174592 Tnp1P10856 55 aa3.55□□□□□ -1.84
Ccdc28a-205ENSMUST00000174592 NebE9Q1W3 7152 aa3.51□□□□□ -1.85
Ccdc28a-205ENSMUST00000174592 Gm11568A2A4M2 211 aa3.48□□□□□ -1.85
Ccdc28a-205ENSMUST00000174592 Krtap9-1Q64526 186 aa3.48□□□□□ -1.85
Ccdc28a-205ENSMUST00000174592 Gm45618A0A1B0GSA0 219 aa3.45□□□□□ -1.86
Ccdc28a-205ENSMUST00000174592 Gm11567Q9D141 195 aa3.44□□□□□ -1.86
Ccdc28a-205ENSMUST00000174592 Syne1Q6ZWR6 8799 aa3.43□□□□□ -1.86
Ccdc28a-205ENSMUST00000174592 Gm39115A0A1B0GSH7 232 aa3.43□□□□□ -1.86
Ccdc28a-205ENSMUST00000174592 Gm45337A0A1B0GS71 263 aa3.39□□□□□ -1.87
Ccdc28a-205ENSMUST00000174592 Hmcn1D3YXG0 5634 aa3.38□□□□□ -1.87
Ccdc28a-205ENSMUST00000174592 Ndufaf8A2AMZ4 74 aa3.37□□□□□ -1.87
Ccdc28a-205ENSMUST00000174592 Krtap4-16Q91W93 202 aa3.36□□□□□ -1.87
Ccdc28a-205ENSMUST00000174592 Gm29735A0A1B0GT06 219 aa3.35□□□□□ -1.87
Ccdc28a-205ENSMUST00000174592 Lce3bQ9CQM7 98 aa3.32□□□□□ -1.88
Ccdc28a-205ENSMUST00000174592 Krtap19-4Q925H7 84 aa3.26□□□□□ -1.89
Ccdc28a-205ENSMUST00000174592 Gm40460A0A1B0GR10 244 aa3.24□□□□□ -1.89
Ccdc28a-205ENSMUST00000174592 Gm7579A0A1B0GRJ4 243 aa3.24□□□□□ -1.89
Ccdc28a-205ENSMUST00000174592 Krtap5-5Q2TA51 241 aa3.24□□□□□ -1.89
Ccdc28a-205ENSMUST00000174592 Krtap5-4Q62220 223 aa3.24□□□□□ -1.89
Ccdc28a-205ENSMUST00000174592 Sprr2fO70557 76 aa3.22□□□□□ -1.89
Ccdc28a-205ENSMUST00000174592 Gm10153A0A1B0GRL1 320 aa3.18□□□□□ -1.9
Ccdc28a-205ENSMUST00000174592 AhnakE9Q616 5656 aaKnown RBP3.13□□□□□ -1.91
Ccdc28a-205ENSMUST00000174592 Gm10142J3KMP7 120 aa3.08□□□□□ -1.92
Ccdc28a-205ENSMUST00000174592 Gm10272F7CZ33 110 aa3.07□□□□□ -1.92
Ccdc28a-205ENSMUST00000174592 Gm11938Q9D3H4 131 aa3.05□□□□□ -1.92
Ccdc28a-205ENSMUST00000174592 Mt1P02802 61 aaKnown RBP3.02□□□□□ -1.93
Ccdc28a-205ENSMUST00000174592 Sprr2dO70555 85 aa3.01□□□□□ -1.93
Ccdc28a-205ENSMUST00000174592 Gm9112A2AI92 75 aa2.96□□□□□ -1.94
Ccdc28a-205ENSMUST00000174592 4933428G20RikQ9D3X4 101 aa2.95□□□□□ -1.94
Ccdc28a-205ENSMUST00000174592 Mt3P28184 68 aa2.89□□□□□ -1.95
Ccdc28a-205ENSMUST00000174592 Lce3cQ91V05 98 aa2.83□□□□□ -1.96
Ccdc28a-205ENSMUST00000174592 Lce3dE9Q8V1 98 aa2.77□□□□□ -1.97
Ccdc28a-205ENSMUST00000174592 ObscnA2AAJ9 8891 aaKnown RBP2.72□□□□□ -1.97
Ccdc28a-205ENSMUST00000174592 Lce3eF8VQJ0 98 aa2.65□□□□□ -1.99
Ccdc28a-205ENSMUST00000174592 Lce3fQ6PAI4 98 aa2.65□□□□□ -1.99
Ccdc28a-205ENSMUST00000174592 Sprr2hO70559 108 aa2.59□□□□□ -1.99
Ccdc28a-205ENSMUST00000174592 Sprr2eO70556 76 aa2.55□□□□□ -2
Ccdc28a-205ENSMUST00000174592 Lce3aQ497I5 98 aa2.55□□□□□ -2
Ccdc28a-205ENSMUST00000174592 Muc16A0A140LJ72 8478 aa2.51□□□□□ -2.01
Ccdc28a-205ENSMUST00000174592 Gm10024A0A0A0MQA4 119 aa2.39□□□□□ -2.03
Ccdc28a-205ENSMUST00000174592 Krtap5-1Q64507 230 aa2.35□□□□□ -2.03
Ccdc28a-205ENSMUST00000174592 Gm4559A4IF42 199 aa2.21□□□□□ -2.06
Ccdc28a-205ENSMUST00000174592 1110025L11RikO09048 78 aa2.07□□□□□ -2.08
Ccdc28a-205ENSMUST00000174592 Krtap6-5Q925H3 78 aa2.07□□□□□ -2.08
Ccdc28a-205ENSMUST00000174592 Sprr2bO70554 98 aa1.99□□□□□ -2.09
Ccdc28a-205ENSMUST00000174592 Gm10229O08631 77 aa1.89□□□□□ -2.11
Ccdc28a-205ENSMUST00000174592 Krtap6-2O08884 159 aa1.75□□□□□ -2.13
Ccdc28a-205ENSMUST00000174592 Krtap21-1Q925H4 128 aa1.64□□□□□ -2.15
Ccdc28a-205ENSMUST00000174592 Phgr1Q8K0G7 91 aa1.53□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 32.7 ms