RNA–Protein interactions for RNA: ENSMUST00000173722.7

Lig3-211, Transcript of DNA ligase 3, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Lig3, Length 5,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-211ENSMUST00000173722 Sprr2dO70555 85 aa3.16□□□□□ -1.9
Lig3-211ENSMUST00000173722 Krtap4-1Q3UUY3 169 aa3.12□□□□□ -1.91
Lig3-211ENSMUST00000173722 Mt4P47945 62 aa3.12□□□□□ -1.91
Lig3-211ENSMUST00000173722 Krtap17-1A2A5X6 109 aa3.12□□□□□ -1.91
Lig3-211ENSMUST00000173722 Sprr2hO70559 108 aa3.11□□□□□ -1.91
Lig3-211ENSMUST00000173722 Gm11562A0PK51 136 aa3.09□□□□□ -1.92
Lig3-211ENSMUST00000173722 Muc5bE9Q5I3 4800 aa3.07□□□□□ -1.92
Lig3-211ENSMUST00000173722 Gm11564A2A4L9 201 aa3.06□□□□□ -1.92
Lig3-211ENSMUST00000173722 Gm11563B1AQ90 168 aa3.06□□□□□ -1.92
Lig3-211ENSMUST00000173722 Gm11595B1AQA7 289 aa3.06□□□□□ -1.92
Lig3-211ENSMUST00000173722 Krtap4-8B1AQA8 209 aa3.06□□□□□ -1.92
Lig3-211ENSMUST00000173722 Syne2Q6ZWQ0 6874 aaKnown RBP3.05□□□□□ -1.92
Lig3-211ENSMUST00000173722 Krtap9-3Q3V2C1 136 aa3.04□□□□□ -1.92
Lig3-211ENSMUST00000173722 Krtap4-9B1AQA9 244 aa3.01□□□□□ -1.93
Lig3-211ENSMUST00000173722 Lce1a2Q9D1K4 149 aa2.93□□□□□ -1.94
Lig3-211ENSMUST00000173722 Krtap4-13Q9D7P3 165 aa2.92□□□□□ -1.94
Lig3-211ENSMUST00000173722 A0A1Y7VLE6 161 aa2.91□□□□□ -1.94
Lig3-211ENSMUST00000173722 2300003K06RikA2A4M0 262 aa2.9□□□□□ -1.95
Lig3-211ENSMUST00000173722 Fsip2A2ARZ3 6995 aa2.9□□□□□ -1.95
Lig3-211ENSMUST00000173722 SspoQ8CG65 4998 aa2.89□□□□□ -1.95
Lig3-211ENSMUST00000173722 Sprr2bO70554 98 aa2.87□□□□□ -1.95
Lig3-211ENSMUST00000173722 Krtap4-7Q9D732 168 aa2.87□□□□□ -1.95
Lig3-211ENSMUST00000173722 Lce1a1Q9CQH5 143 aa2.85□□□□□ -1.95
Lig3-211ENSMUST00000173722 Krtap6-3A0A087WQL6 57 aa2.79□□□□□ -1.96
Lig3-211ENSMUST00000173722 A030003K21RikA0A1Y7VIM3 128 aa2.78□□□□□ -1.96
Lig3-211ENSMUST00000173722 Lce1kJ3QP15 125 aa2.75□□□□□ -1.97
Lig3-211ENSMUST00000173722 Gm11555B1AQ89 175 aa2.75□□□□□ -1.97
Lig3-211ENSMUST00000173722 Syne1Q6ZWR6 8799 aa2.74□□□□□ -1.97
Lig3-211ENSMUST00000173722 Gm11938Q9D3H4 131 aa2.64□□□□□ -1.99
Lig3-211ENSMUST00000173722 Mt3P28184 68 aa2.64□□□□□ -1.99
Lig3-211ENSMUST00000173722 Gm6217A0A1Y7VJK9 128 aa2.63□□□□□ -1.99
Lig3-211ENSMUST00000173722 A0A1Y7VJ07 166 aa2.58□□□□□ -2
Lig3-211ENSMUST00000173722 Gm11554B1AQB2 190 aa2.54□□□□□ -2
Lig3-211ENSMUST00000173722 Krtap28-10A0A1Y7VP58 119 aa2.52□□□□□ -2.01
Lig3-211ENSMUST00000173722 Krtap20-2E9Q0A8 60 aa2.52□□□□□ -2.01
Lig3-211ENSMUST00000173722 A0A1Y7VJH8 109 aa2.47□□□□□ -2.01
Lig3-211ENSMUST00000173722 Krtap4-16Q91W93 202 aa2.47□□□□□ -2.01
Lig3-211ENSMUST00000173722 Eppk1Q8R0W0 6548 aa2.46□□□□□ -2.02
Lig3-211ENSMUST00000173722 Krtap28-13A0A087WQP5 138 aa2.42□□□□□ -2.02
Lig3-211ENSMUST00000173722 Muc16A0A140LJ72 8478 aa2.41□□□□□ -2.02
Lig3-211ENSMUST00000173722 A030005K14RikA0A1Y7VNY1 122 aa2.41□□□□□ -2.02
Lig3-211ENSMUST00000173722 Macf1Q9QXZ0 7354 aaKnown RBP2.39□□□□□ -2.03
Lig3-211ENSMUST00000173722 A030014E15RikA0A1Y7VJV2 120 aa2.38□□□□□ -2.03
Lig3-211ENSMUST00000173722 ObscnA2AAJ9 8891 aaKnown RBP2.38□□□□□ -2.03
Lig3-211ENSMUST00000173722 A030005L19RikA0A1Y7VIU2 113 aa2.34□□□□□ -2.04
Lig3-211ENSMUST00000173722 Gm7544A0A1Y7VJ58 118 aa2.31□□□□□ -2.04
Lig3-211ENSMUST00000173722 Mt1P02802 61 aaKnown RBP2.3□□□□□ -2.04
Lig3-211ENSMUST00000173722 DstQ91ZU6 7393 aaKnown RBP2.21□□□□□ -2.06
Lig3-211ENSMUST00000173722 NebE9Q1W3 7152 aa2.2□□□□□ -2.06
Lig3-211ENSMUST00000173722 Gm11559Q9D3H7 191 aa2.2□□□□□ -2.06
Lig3-211ENSMUST00000173722 Kmt2dQ6PDK2 5588 aa2.14□□□□□ -2.07
Lig3-211ENSMUST00000173722 Gm11568A2A4M2 211 aa2.12□□□□□ -2.07
Lig3-211ENSMUST00000173722 Krtap9-1Q64526 186 aa2.12□□□□□ -2.07
Lig3-211ENSMUST00000173722 Gm11639A0A1D5RLM8 5808 aa2.11□□□□□ -2.07
Lig3-211ENSMUST00000173722 A0A286YCP9 139 aa2.06□□□□□ -2.08
Lig3-211ENSMUST00000173722 Gpr98Q8VHN7 6298 aaKnown RBP2.06□□□□□ -2.08
Lig3-211ENSMUST00000173722 Krtap5-2Q9D5Z7 189 aa2.04□□□□□ -2.08
Lig3-211ENSMUST00000173722 Gm4553A0A1B0GSA9 284 aa1.95□□□□□ -2.1
Lig3-211ENSMUST00000173722 Muc19Q6PZE0 7524 aa1.94□□□□□ -2.1
Lig3-211ENSMUST00000173722 Hmcn1D3YXG0 5634 aa1.94□□□□□ -2.1
Lig3-211ENSMUST00000173722 Gm2431E9Q8S1 172 aa1.88□□□□□ -2.11
Lig3-211ENSMUST00000173722 Phgr1Q8K0G7 91 aa1.84□□□□□ -2.12
Lig3-211ENSMUST00000173722 1110025L11RikO09048 78 aa1.81□□□□□ -2.12
Lig3-211ENSMUST00000173722 Krtap6-5Q925H3 78 aa1.81□□□□□ -2.12
Lig3-211ENSMUST00000173722 Gm10229O08631 77 aa1.81□□□□□ -2.12
Lig3-211ENSMUST00000173722 AhnakE9Q616 5656 aaKnown RBP1.77□□□□□ -2.13
Lig3-211ENSMUST00000173722 Gm45337A0A1B0GS71 263 aa1.76□□□□□ -2.13
Lig3-211ENSMUST00000173722 Gm10153A0A1B0GRL1 320 aa1.75□□□□□ -2.13
Lig3-211ENSMUST00000173722 Gm11567Q9D141 195 aa1.72□□□□□ -2.13
Lig3-211ENSMUST00000173722 Gm40460A0A1B0GR10 244 aa1.71□□□□□ -2.14
Lig3-211ENSMUST00000173722 Gm7579A0A1B0GRJ4 243 aa1.71□□□□□ -2.14
Lig3-211ENSMUST00000173722 Krtap5-5Q2TA51 241 aa1.71□□□□□ -2.14
Lig3-211ENSMUST00000173722 Krtap5-4Q62220 223 aa1.71□□□□□ -2.14
Lig3-211ENSMUST00000173722 Gm39115A0A1B0GSH7 232 aa1.66□□□□□ -2.14
Lig3-211ENSMUST00000173722 Gm45618A0A1B0GSA0 219 aa1.49□□□□□ -2.17
Lig3-211ENSMUST00000173722 Krtap6-2O08884 159 aa1.41□□□□□ -2.18
Lig3-211ENSMUST00000173722 Krtap21-1Q925H4 128 aa1.32□□□□□ -2.2
Lig3-211ENSMUST00000173722 Gm29735A0A1B0GT06 219 aa1.26□□□□□ -2.21
Lig3-211ENSMUST00000173722 Krtap5-1Q64507 230 aa1.06□□□□□ -2.24
Lig3-211ENSMUST00000173722 Gm4559A4IF42 199 aa0.84□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 62.8 ms