RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Gm7735D3YX18 52 aa1.86□□□□□ -2.11
Ubr4-212ENSMUST00000165860 Lce1a2Q9D1K4 149 aa1.86□□□□□ -2.11
Ubr4-212ENSMUST00000165860 Abca13Q5SSE9 5034 aa1.85□□□□□ -2.11
Ubr4-212ENSMUST00000165860 Mt4P47945 62 aa1.84□□□□□ -2.11
Ubr4-212ENSMUST00000165860 Gm9789Q8BIG3 52 aa1.83□□□□□ -2.12
Ubr4-212ENSMUST00000165860 Krtap4-16Q91W93 202 aa1.82□□□□□ -2.12
Ubr4-212ENSMUST00000165860 4932415D10RikA0A1W2P6U8 4986 aa1.8□□□□□ -2.12
Ubr4-212ENSMUST00000165860 Fat4Q2PZL6 4981 aa1.79□□□□□ -2.12
Ubr4-212ENSMUST00000165860 Gm11569B1AQB1 180 aa1.78□□□□□ -2.12
Ubr4-212ENSMUST00000165860 Krtap4-2B1AQ85 167 aa1.75□□□□□ -2.13
Ubr4-212ENSMUST00000165860 Lce1a1Q9CQH5 143 aa1.74□□□□□ -2.13
Ubr4-212ENSMUST00000165860 Krtap17-1A2A5X6 109 aa1.74□□□□□ -2.13
Ubr4-212ENSMUST00000165860 Krtap4-6Q3V4B7 195 aa1.74□□□□□ -2.13
Ubr4-212ENSMUST00000165860 2300003K06RikA2A4M0 262 aa1.73□□□□□ -2.13
Ubr4-212ENSMUST00000165860 Sprr2bO70554 98 aa1.72□□□□□ -2.13
Ubr4-212ENSMUST00000165860 Gm10061D3Z714 54 aa1.71□□□□□ -2.14
Ubr4-212ENSMUST00000165860 Lce1kJ3QP15 125 aa1.7□□□□□ -2.14
Ubr4-212ENSMUST00000165860 Hmcn2A2AJ76 5100 aa1.7□□□□□ -2.14
Ubr4-212ENSMUST00000165860 Ush2AQ2QI47 5193 aa1.68□□□□□ -2.14
Ubr4-212ENSMUST00000165860 SspoQ8CG65 4998 aa1.65□□□□□ -2.15
Ubr4-212ENSMUST00000165860 Krtap4-7Q9D732 168 aa1.65□□□□□ -2.15
Ubr4-212ENSMUST00000165860 Mt1P02802 61 aaKnown RBP1.62□□□□□ -2.15
Ubr4-212ENSMUST00000165860 Krtap4-1Q3UUY3 169 aa1.62□□□□□ -2.15
Ubr4-212ENSMUST00000165860 Gm11596B1AQB0 205 aa1.61□□□□□ -2.15
Ubr4-212ENSMUST00000165860 Gm11639A0A1D5RLM8 5808 aa1.61□□□□□ -2.15
Ubr4-212ENSMUST00000165860 Krtap4-9B1AQA9 244 aa1.59□□□□□ -2.15
Ubr4-212ENSMUST00000165860 Gm11564A2A4L9 201 aa1.58□□□□□ -2.16
Ubr4-212ENSMUST00000165860 Gm11563B1AQ90 168 aa1.58□□□□□ -2.16
Ubr4-212ENSMUST00000165860 Gm11595B1AQA7 289 aa1.58□□□□□ -2.16
Ubr4-212ENSMUST00000165860 Krtap4-8B1AQA8 209 aa1.58□□□□□ -2.16
Ubr4-212ENSMUST00000165860 Muc16A0A140LJ72 8478 aa1.58□□□□□ -2.16
Ubr4-212ENSMUST00000165860 Krtap4-13Q9D7P3 165 aa1.57□□□□□ -2.16
Ubr4-212ENSMUST00000165860 Kmt2dQ6PDK2 5588 aa1.56□□□□□ -2.16
Ubr4-212ENSMUST00000165860 NebE9Q1W3 7152 aa1.51□□□□□ -2.17
Ubr4-212ENSMUST00000165860 Gm11554B1AQB2 190 aa1.5□□□□□ -2.17
Ubr4-212ENSMUST00000165860 ObscnA2AAJ9 8891 aaKnown RBP1.5□□□□□ -2.17
Ubr4-212ENSMUST00000165860 Macf1Q9QXZ0 7354 aaKnown RBP1.49□□□□□ -2.17
Ubr4-212ENSMUST00000165860 DstQ91ZU6 7393 aaKnown RBP1.48□□□□□ -2.17
Ubr4-212ENSMUST00000165860 Hmcn1D3YXG0 5634 aa1.44□□□□□ -2.18
Ubr4-212ENSMUST00000165860 Gm11568A2A4M2 211 aa1.43□□□□□ -2.18
Ubr4-212ENSMUST00000165860 Krtap6-3A0A087WQL6 57 aa1.37□□□□□ -2.19
Ubr4-212ENSMUST00000165860 Krtap9-1Q64526 186 aa1.37□□□□□ -2.19
Ubr4-212ENSMUST00000165860 Krtap20-2E9Q0A8 60 aa1.31□□□□□ -2.2
Ubr4-212ENSMUST00000165860 AhnakE9Q616 5656 aaKnown RBP1.3□□□□□ -2.2
Ubr4-212ENSMUST00000165860 Gm11555B1AQ89 175 aa1.26□□□□□ -2.21
Ubr4-212ENSMUST00000165860 Muc19Q6PZE0 7524 aa1.25□□□□□ -2.21
Ubr4-212ENSMUST00000165860 1110025L11RikO09048 78 aa1.21□□□□□ -2.22
Ubr4-212ENSMUST00000165860 Krtap6-5Q925H3 78 aa1.21□□□□□ -2.22
Ubr4-212ENSMUST00000165860 Phgr1Q8K0G7 91 aa1.18□□□□□ -2.22
Ubr4-212ENSMUST00000165860 Gm11567Q9D141 195 aa1.16□□□□□ -2.22
Ubr4-212ENSMUST00000165860 Gm10229O08631 77 aa1.13□□□□□ -2.23
Ubr4-212ENSMUST00000165860 Gm11559Q9D3H7 191 aa1.1□□□□□ -2.23
Ubr4-212ENSMUST00000165860 Krtap5-2Q9D5Z7 189 aa1.03□□□□□ -2.24
Ubr4-212ENSMUST00000165860 Gm4553A0A1B0GSA9 284 aa0.96□□□□□ -2.26
Ubr4-212ENSMUST00000165860 A030005L19RikA0A1Y7VIU2 113 aa0.94□□□□□ -2.26
Ubr4-212ENSMUST00000165860 Krtap6-2O08884 159 aa0.9□□□□□ -2.27
Ubr4-212ENSMUST00000165860 Gm40460A0A1B0GR10 244 aa0.9□□□□□ -2.27
Ubr4-212ENSMUST00000165860 Gm7579A0A1B0GRJ4 243 aa0.9□□□□□ -2.27
Ubr4-212ENSMUST00000165860 Krtap5-5Q2TA51 241 aa0.9□□□□□ -2.27
Ubr4-212ENSMUST00000165860 Krtap5-4Q62220 223 aa0.9□□□□□ -2.27
Ubr4-212ENSMUST00000165860 Krtap21-1Q925H4 128 aa0.89□□□□□ -2.27
Ubr4-212ENSMUST00000165860 Gm45337A0A1B0GS71 263 aa0.88□□□□□ -2.27
Ubr4-212ENSMUST00000165860 Gm10153A0A1B0GRL1 320 aa0.87□□□□□ -2.27
Ubr4-212ENSMUST00000165860 Gm2431E9Q8S1 172 aa0.86□□□□□ -2.27
Ubr4-212ENSMUST00000165860 Gm39115A0A1B0GSH7 232 aa0.84□□□□□ -2.27
Ubr4-212ENSMUST00000165860 A0A1Y7VJH8 109 aa0.84□□□□□ -2.28
Ubr4-212ENSMUST00000165860 Gm45618A0A1B0GSA0 219 aa0.77□□□□□ -2.29
Ubr4-212ENSMUST00000165860 A0A1Y7VLE6 161 aa0.75□□□□□ -2.29
Ubr4-212ENSMUST00000165860 Gm29735A0A1B0GT06 219 aa0.73□□□□□ -2.29
Ubr4-212ENSMUST00000165860 A0A286YCP9 139 aa0.63□□□□□ -2.31
Ubr4-212ENSMUST00000165860 Krtap28-13A0A087WQP5 138 aa0.54□□□□□ -2.32
Ubr4-212ENSMUST00000165860 A0A1Y7VJ07 166 aa0.54□□□□□ -2.32
Ubr4-212ENSMUST00000165860 A030014E15RikA0A1Y7VJV2 120 aa0.51□□□□□ -2.33
Ubr4-212ENSMUST00000165860 Krtap5-1Q64507 230 aa0.42□□□□□ -2.34
Ubr4-212ENSMUST00000165860 Krtap28-10A0A1Y7VP58 119 aa0.38□□□□□ -2.35
Ubr4-212ENSMUST00000165860 A030003K21RikA0A1Y7VIM3 128 aa0.38□□□□□ -2.35
Ubr4-212ENSMUST00000165860 A030005K14RikA0A1Y7VNY1 122 aa0.37□□□□□ -2.35
Ubr4-212ENSMUST00000165860 Gm6217A0A1Y7VJK9 128 aa0.34□□□□□ -2.36
Ubr4-212ENSMUST00000165860 Gm4559A4IF42 199 aa0.33□□□□□ -2.36
Ubr4-212ENSMUST00000165860 Gm7544A0A1Y7VJ58 118 aa0.11□□□□□ -2.39
Retrieved 80 of 22,080 RNA–protein pairs in 11.5 ms