RNA–Protein interactions for RNA: ENSMUST00000163419.7

Scaf4-202, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Scaf4, Length 4,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-202ENSMUST00000163419 Krtap9-3Q3V2C1 136 aa3.97□□□□□ -1.77
Scaf4-202ENSMUST00000163419 Syne2Q6ZWQ0 6874 aaKnown RBP3.97□□□□□ -1.77
Scaf4-202ENSMUST00000163419 Gm11596B1AQB0 205 aa3.96□□□□□ -1.78
Scaf4-202ENSMUST00000163419 Krtap4-9B1AQA9 244 aa3.95□□□□□ -1.78
Scaf4-202ENSMUST00000163419 Lce1eQ9D139 143 aa3.94□□□□□ -1.78
Scaf4-202ENSMUST00000163419 Sprr2fO70557 76 aa3.93□□□□□ -1.78
Scaf4-202ENSMUST00000163419 A0A1Y7VLE6 161 aa3.92□□□□□ -1.78
Scaf4-202ENSMUST00000163419 Gm11564A2A4L9 201 aa3.92□□□□□ -1.78
Scaf4-202ENSMUST00000163419 Gm11563B1AQ90 168 aa3.92□□□□□ -1.78
Scaf4-202ENSMUST00000163419 Gm11595B1AQA7 289 aa3.92□□□□□ -1.78
Scaf4-202ENSMUST00000163419 Krtap4-8B1AQA8 209 aa3.92□□□□□ -1.78
Scaf4-202ENSMUST00000163419 Sprr2eO70556 76 aa3.92□□□□□ -1.78
Scaf4-202ENSMUST00000163419 Lce1a2Q9D1K4 149 aa3.91□□□□□ -1.78
Scaf4-202ENSMUST00000163419 Muc5bE9Q5I3 4800 aa3.89□□□□□ -1.79
Scaf4-202ENSMUST00000163419 ObscnA2AAJ9 8891 aaKnown RBP3.87□□□□□ -1.79
Scaf4-202ENSMUST00000163419 Krtap19-4Q925H7 84 aa3.85□□□□□ -1.79
Scaf4-202ENSMUST00000163419 A0A1Y7VJH8 109 aa3.85□□□□□ -1.79
Scaf4-202ENSMUST00000163419 Krtap4-13Q9D7P3 165 aa3.85□□□□□ -1.79
Scaf4-202ENSMUST00000163419 2300003K06RikA2A4M0 262 aa3.84□□□□□ -1.79
Scaf4-202ENSMUST00000163419 SspoQ8CG65 4998 aa3.84□□□□□ -1.79
Scaf4-202ENSMUST00000163419 DstQ91ZU6 7393 aaKnown RBP3.81□□□□□ -1.8
Scaf4-202ENSMUST00000163419 Krtap4-7Q9D732 168 aa3.81□□□□□ -1.8
Scaf4-202ENSMUST00000163419 Krtap28-10A0A1Y7VP58 119 aa3.75□□□□□ -1.81
Scaf4-202ENSMUST00000163419 Gm10024A0A0A0MQA4 119 aa3.7□□□□□ -1.82
Scaf4-202ENSMUST00000163419 Lce1kJ3QP15 125 aa3.62□□□□□ -1.83
Scaf4-202ENSMUST00000163419 NebE9Q1W3 7152 aa3.62□□□□□ -1.83
Scaf4-202ENSMUST00000163419 Gm11938Q9D3H4 131 aa3.61□□□□□ -1.83
Scaf4-202ENSMUST00000163419 Lce1a1Q9CQH5 143 aa3.54□□□□□ -1.84
Scaf4-202ENSMUST00000163419 A030005L19RikA0A1Y7VIU2 113 aa3.53□□□□□ -1.84
Scaf4-202ENSMUST00000163419 Krtap28-13A0A087WQP5 138 aa3.52□□□□□ -1.85
Scaf4-202ENSMUST00000163419 Sprr2dO70555 85 aa3.51□□□□□ -1.85
Scaf4-202ENSMUST00000163419 Gm7544A0A1Y7VJ58 118 aa3.51□□□□□ -1.85
Scaf4-202ENSMUST00000163419 Muc19Q6PZE0 7524 aa3.5□□□□□ -1.85
Scaf4-202ENSMUST00000163419 A030003K21RikA0A1Y7VIM3 128 aa3.48□□□□□ -1.85
Scaf4-202ENSMUST00000163419 Gm11554B1AQB2 190 aa3.46□□□□□ -1.86
Scaf4-202ENSMUST00000163419 A030005K14RikA0A1Y7VNY1 122 aa3.43□□□□□ -1.86
Scaf4-202ENSMUST00000163419 Krtap6-3A0A087WQL6 57 aa3.41□□□□□ -1.86
Scaf4-202ENSMUST00000163419 Krtap20-2E9Q0A8 60 aa3.31□□□□□ -1.88
Scaf4-202ENSMUST00000163419 Sprr2hO70559 108 aa3.28□□□□□ -1.88
Scaf4-202ENSMUST00000163419 Gm11555B1AQ89 175 aa3.28□□□□□ -1.88
Scaf4-202ENSMUST00000163419 Mt3P28184 68 aa3.27□□□□□ -1.89
Scaf4-202ENSMUST00000163419 Kmt2dQ6PDK2 5588 aa3.24□□□□□ -1.89
Scaf4-202ENSMUST00000163419 Gm6217A0A1Y7VJK9 128 aa3.24□□□□□ -1.89
Scaf4-202ENSMUST00000163419 Krtap31-1Q9D644 177 aa3.19□□□□□ -1.9
Scaf4-202ENSMUST00000163419 Eppk1Q8R0W0 6548 aa3.14□□□□□ -1.91
Scaf4-202ENSMUST00000163419 Krtap4-16Q91W93 202 aa3.13□□□□□ -1.91
Scaf4-202ENSMUST00000163419 A0A1Y7VJ07 166 aa3.11□□□□□ -1.91
Scaf4-202ENSMUST00000163419 Sprr2bO70554 98 aa3.05□□□□□ -1.92
Scaf4-202ENSMUST00000163419 Gpr98Q8VHN7 6298 aaKnown RBP3.02□□□□□ -1.93
Scaf4-202ENSMUST00000163419 Mt1P02802 61 aaKnown RBP3.02□□□□□ -1.93
Scaf4-202ENSMUST00000163419 Gm11639A0A1D5RLM8 5808 aa2.91□□□□□ -1.94
Scaf4-202ENSMUST00000163419 A030014E15RikA0A1Y7VJV2 120 aa2.89□□□□□ -1.95
Scaf4-202ENSMUST00000163419 A0A286YCP9 139 aa2.74□□□□□ -1.97
Scaf4-202ENSMUST00000163419 Krtap31-2Q8CAY5 177 aa2.73□□□□□ -1.97
Scaf4-202ENSMUST00000163419 Hmcn1D3YXG0 5634 aa2.66□□□□□ -1.98
Scaf4-202ENSMUST00000163419 Gm11559Q9D3H7 191 aa2.61□□□□□ -1.99
Scaf4-202ENSMUST00000163419 Gm11568A2A4M2 211 aa2.59□□□□□ -2
Scaf4-202ENSMUST00000163419 Krtap9-1Q64526 186 aa2.59□□□□□ -2
Scaf4-202ENSMUST00000163419 Krtap5-2Q9D5Z7 189 aa2.49□□□□□ -2.01
Scaf4-202ENSMUST00000163419 1110025L11RikO09048 78 aa2.47□□□□□ -2.01
Scaf4-202ENSMUST00000163419 Krtap6-5Q925H3 78 aa2.47□□□□□ -2.01
Scaf4-202ENSMUST00000163419 Gm10153A0A1B0GRL1 320 aa2.46□□□□□ -2.02
Scaf4-202ENSMUST00000163419 Gm10229O08631 77 aa2.33□□□□□ -2.04
Scaf4-202ENSMUST00000163419 Gm45337A0A1B0GS71 263 aa2.27□□□□□ -2.05
Scaf4-202ENSMUST00000163419 Gm4553A0A1B0GSA9 284 aa2.24□□□□□ -2.05
Scaf4-202ENSMUST00000163419 Gm40460A0A1B0GR10 244 aa2.21□□□□□ -2.06
Scaf4-202ENSMUST00000163419 Gm7579A0A1B0GRJ4 243 aa2.21□□□□□ -2.06
Scaf4-202ENSMUST00000163419 Krtap5-5Q2TA51 241 aa2.21□□□□□ -2.06
Scaf4-202ENSMUST00000163419 Krtap5-4Q62220 223 aa2.21□□□□□ -2.06
Scaf4-202ENSMUST00000163419 AhnakE9Q616 5656 aaKnown RBP2.21□□□□□ -2.06
Scaf4-202ENSMUST00000163419 Gm2431E9Q8S1 172 aa2.21□□□□□ -2.06
Scaf4-202ENSMUST00000163419 Gm45618A0A1B0GSA0 219 aa2.19□□□□□ -2.06
Scaf4-202ENSMUST00000163419 Phgr1Q8K0G7 91 aa2.08□□□□□ -2.08
Scaf4-202ENSMUST00000163419 Gm39115A0A1B0GSH7 232 aa2.06□□□□□ -2.08
Scaf4-202ENSMUST00000163419 Krtap6-2O08884 159 aa1.94□□□□□ -2.1
Scaf4-202ENSMUST00000163419 Krtap21-1Q925H4 128 aa1.79□□□□□ -2.12
Scaf4-202ENSMUST00000163419 Gm11567Q9D141 195 aa1.78□□□□□ -2.12
Scaf4-202ENSMUST00000163419 Gm29735A0A1B0GT06 219 aa1.73□□□□□ -2.13
Scaf4-202ENSMUST00000163419 Krtap5-1Q64507 230 aa1.41□□□□□ -2.18
Scaf4-202ENSMUST00000163419 Gm4559A4IF42 199 aa1.33□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 90.2 ms