RNA–Protein interactions for RNA: ENSMUST00000116522.7

Nck1-202, Transcript of Cytoplasmic protein NCK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nck1, Length 4,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-202ENSMUST00000116522 Lce3aQ497I5 98 aa4.73□□□□□ -1.65
Nck1-202ENSMUST00000116522 Muc16A0A140LJ72 8478 aa4.68□□□□□ -1.66
Nck1-202ENSMUST00000116522 Lce1gQ9D195 139 aa4.65□□□□□ -1.67
Nck1-202ENSMUST00000116522 A030003K21RikA0A1Y7VIM3 128 aa4.64□□□□□ -1.67
Nck1-202ENSMUST00000116522 Krtap19-4Q925H7 84 aa4.62□□□□□ -1.67
Nck1-202ENSMUST00000116522 Lce1bQ9D149 137 aa4.61□□□□□ -1.67
Nck1-202ENSMUST00000116522 Lce1fB9EJP6 147 aa4.61□□□□□ -1.67
Nck1-202ENSMUST00000116522 Lce1cQ9D1C5 147 aa4.61□□□□□ -1.67
Nck1-202ENSMUST00000116522 Lce1lQ9D1G7 135 aa4.61□□□□□ -1.67
Nck1-202ENSMUST00000116522 Lce1dQ9D731 133 aa4.61□□□□□ -1.67
Nck1-202ENSMUST00000116522 Krtap4-6Q3V4B7 195 aa4.6□□□□□ -1.67
Nck1-202ENSMUST00000116522 Sprr2iO70560 76 aa4.58□□□□□ -1.68
Nck1-202ENSMUST00000116522 Mt4P47945 62 aa4.56□□□□□ -1.68
Nck1-202ENSMUST00000116522 Muc5bE9Q5I3 4800 aa4.55□□□□□ -1.68
Nck1-202ENSMUST00000116522 Gm11938Q9D3H4 131 aa4.54□□□□□ -1.68
Nck1-202ENSMUST00000116522 Lce1eQ9D139 143 aa4.54□□□□□ -1.68
Nck1-202ENSMUST00000116522 Fsip2A2ARZ3 6995 aa4.52□□□□□ -1.69
Nck1-202ENSMUST00000116522 Sprr2dO70555 85 aa4.5□□□□□ -1.69
Nck1-202ENSMUST00000116522 SspoQ8CG65 4998 aa4.41□□□□□ -1.7
Nck1-202ENSMUST00000116522 Gm6217A0A1Y7VJK9 128 aa4.38□□□□□ -1.71
Nck1-202ENSMUST00000116522 Gm10024A0A0A0MQA4 119 aa4.37□□□□□ -1.71
Nck1-202ENSMUST00000116522 Gm11562A0PK51 136 aa4.36□□□□□ -1.71
Nck1-202ENSMUST00000116522 Krtap4-9B1AQA9 244 aa4.29□□□□□ -1.72
Nck1-202ENSMUST00000116522 Gm11564A2A4L9 201 aa4.27□□□□□ -1.73
Nck1-202ENSMUST00000116522 Gm11595B1AQA7 289 aa4.27□□□□□ -1.73
Nck1-202ENSMUST00000116522 Krtap4-8B1AQA8 209 aa4.27□□□□□ -1.73
Nck1-202ENSMUST00000116522 Krtap31-1Q9D644 177 aa4.27□□□□□ -1.73
Nck1-202ENSMUST00000116522 Syne2Q6ZWQ0 6874 aaKnown RBP4.26□□□□□ -1.73
Nck1-202ENSMUST00000116522 Gm11596B1AQB0 205 aa4.24□□□□□ -1.73
Nck1-202ENSMUST00000116522 Sprr2eO70556 76 aa4.24□□□□□ -1.73
Nck1-202ENSMUST00000116522 2300003K06RikA2A4M0 262 aa4.24□□□□□ -1.73
Nck1-202ENSMUST00000116522 Sprr2hO70559 108 aa4.19□□□□□ -1.74
Nck1-202ENSMUST00000116522 Krtap4-13Q9D7P3 165 aa4.18□□□□□ -1.74
Nck1-202ENSMUST00000116522 Lce1a1Q9CQH5 143 aa4.18□□□□□ -1.74
Nck1-202ENSMUST00000116522 Lce1kJ3QP15 125 aa4.17□□□□□ -1.74
Nck1-202ENSMUST00000116522 Sprr2fO70557 76 aa4.15□□□□□ -1.75
Nck1-202ENSMUST00000116522 ObscnA2AAJ9 8891 aaKnown RBP4.11□□□□□ -1.75
Nck1-202ENSMUST00000116522 Krtap4-16Q91W93 202 aa4.09□□□□□ -1.75
Nck1-202ENSMUST00000116522 Macf1Q9QXZ0 7354 aaKnown RBP4.01□□□□□ -1.77
Nck1-202ENSMUST00000116522 A0A286YCP9 139 aa3.88□□□□□ -1.79
Nck1-202ENSMUST00000116522 Mt1P02802 61 aaKnown RBP3.8□□□□□ -1.8
Nck1-202ENSMUST00000116522 Mt3P28184 68 aa3.8□□□□□ -1.8
Nck1-202ENSMUST00000116522 Krtap20-2E9Q0A8 60 aa3.74□□□□□ -1.81
Nck1-202ENSMUST00000116522 Muc19Q6PZE0 7524 aa3.68□□□□□ -1.82
Nck1-202ENSMUST00000116522 Gm11554B1AQB2 190 aa3.64□□□□□ -1.83
Nck1-202ENSMUST00000116522 Krtap6-3A0A087WQL6 57 aa3.58□□□□□ -1.84
Nck1-202ENSMUST00000116522 Krtap31-2Q8CAY5 177 aa3.55□□□□□ -1.84
Nck1-202ENSMUST00000116522 DstQ91ZU6 7393 aaKnown RBP3.48□□□□□ -1.85
Nck1-202ENSMUST00000116522 NebE9Q1W3 7152 aa3.43□□□□□ -1.86
Nck1-202ENSMUST00000116522 Kmt2dQ6PDK2 5588 aa3.38□□□□□ -1.87
Nck1-202ENSMUST00000116522 Gm11568A2A4M2 211 aa3.26□□□□□ -1.89
Nck1-202ENSMUST00000116522 Krtap9-1Q64526 186 aa3.26□□□□□ -1.89
Nck1-202ENSMUST00000116522 1110025L11RikO09048 78 aa3.08□□□□□ -1.92
Nck1-202ENSMUST00000116522 Krtap6-5Q925H3 78 aa3.08□□□□□ -1.92
Nck1-202ENSMUST00000116522 Sprr2bO70554 98 aa3.07□□□□□ -1.92
Nck1-202ENSMUST00000116522 Hmcn1D3YXG0 5634 aa3.02□□□□□ -1.93
Nck1-202ENSMUST00000116522 Gm11559Q9D3H7 191 aa2.98□□□□□ -1.93
Nck1-202ENSMUST00000116522 Krtap5-2Q9D5Z7 189 aa2.91□□□□□ -1.94
Nck1-202ENSMUST00000116522 Gm10229O08631 77 aa2.83□□□□□ -1.96
Nck1-202ENSMUST00000116522 Gm11639A0A1D5RLM8 5808 aa2.81□□□□□ -1.96
Nck1-202ENSMUST00000116522 Eppk1Q8R0W0 6548 aa2.81□□□□□ -1.96
Nck1-202ENSMUST00000116522 Gpr98Q8VHN7 6298 aaKnown RBP2.8□□□□□ -1.96
Nck1-202ENSMUST00000116522 Gm2431E9Q8S1 172 aa2.73□□□□□ -1.97
Nck1-202ENSMUST00000116522 Phgr1Q8K0G7 91 aa2.69□□□□□ -1.98
Nck1-202ENSMUST00000116522 Gm4553A0A1B0GSA9 284 aa2.68□□□□□ -1.98
Nck1-202ENSMUST00000116522 Gm10153A0A1B0GRL1 320 aa2.67□□□□□ -1.98
Nck1-202ENSMUST00000116522 Gm39115A0A1B0GSH7 232 aa2.63□□□□□ -1.99
Nck1-202ENSMUST00000116522 Gm45618A0A1B0GSA0 219 aa2.61□□□□□ -1.99
Nck1-202ENSMUST00000116522 Gm29735A0A1B0GT06 219 aa2.54□□□□□ -2
Nck1-202ENSMUST00000116522 AhnakE9Q616 5656 aaKnown RBP2.53□□□□□ -2.01
Nck1-202ENSMUST00000116522 Gm45337A0A1B0GS71 263 aa2.45□□□□□ -2.02
Nck1-202ENSMUST00000116522 Gm40460A0A1B0GR10 244 aa2.39□□□□□ -2.03
Nck1-202ENSMUST00000116522 Gm7579A0A1B0GRJ4 243 aa2.39□□□□□ -2.03
Nck1-202ENSMUST00000116522 Krtap5-5Q2TA51 241 aa2.39□□□□□ -2.03
Nck1-202ENSMUST00000116522 Krtap5-4Q62220 223 aa2.39□□□□□ -2.03
Nck1-202ENSMUST00000116522 Krtap6-2O08884 159 aa2.33□□□□□ -2.04
Nck1-202ENSMUST00000116522 Krtap21-1Q925H4 128 aa2.32□□□□□ -2.04
Nck1-202ENSMUST00000116522 Gm11567Q9D141 195 aa2.16□□□□□ -2.06
Nck1-202ENSMUST00000116522 Krtap5-1Q64507 230 aa1.95□□□□□ -2.1
Nck1-202ENSMUST00000116522 Gm4559A4IF42 199 aa1.79□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 13.6 ms