RNA–Protein interactions for RNA: ENSMUST00000115658.5

Pcdha11-201, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-201ENSMUST00000115658 Lce1bQ9D149 137 aa4.13□□□□□ -1.75
Pcdha11-201ENSMUST00000115658 Hmcn2A2AJ76 5100 aa4.11□□□□□ -1.75
Pcdha11-201ENSMUST00000115658 Krtap4-6Q3V4B7 195 aa4.11□□□□□ -1.75
Pcdha11-201ENSMUST00000115658 Rnf213E9Q555 5152 aaKnown RBP4.1□□□□□ -1.75
Pcdha11-201ENSMUST00000115658 Mt4P47945 62 aa4.07□□□□□ -1.76
Pcdha11-201ENSMUST00000115658 Krtap4-16Q91W93 202 aa4.06□□□□□ -1.76
Pcdha11-201ENSMUST00000115658 Gm11562A0PK51 136 aa4.05□□□□□ -1.76
Pcdha11-201ENSMUST00000115658 Krtap17-1A2A5X6 109 aa4.03□□□□□ -1.76
Pcdha11-201ENSMUST00000115658 Krtap4-1Q3UUY3 169 aa3.95□□□□□ -1.78
Pcdha11-201ENSMUST00000115658 Gm11596B1AQB0 205 aa3.94□□□□□ -1.78
Pcdha11-201ENSMUST00000115658 Krtap31-2Q8CAY5 177 aa3.92□□□□□ -1.78
Pcdha11-201ENSMUST00000115658 Syne1Q6ZWR6 8799 aa3.9□□□□□ -1.78
Pcdha11-201ENSMUST00000115658 Muc5bE9Q5I3 4800 aa3.89□□□□□ -1.79
Pcdha11-201ENSMUST00000115658 Gm11564A2A4L9 201 aa3.86□□□□□ -1.79
Pcdha11-201ENSMUST00000115658 Gm11563B1AQ90 168 aa3.86□□□□□ -1.79
Pcdha11-201ENSMUST00000115658 Gm11595B1AQA7 289 aa3.86□□□□□ -1.79
Pcdha11-201ENSMUST00000115658 Krtap4-8B1AQA8 209 aa3.86□□□□□ -1.79
Pcdha11-201ENSMUST00000115658 Fsip2A2ARZ3 6995 aa3.84□□□□□ -1.79
Pcdha11-201ENSMUST00000115658 Krtap4-9B1AQA9 244 aa3.83□□□□□ -1.8
Pcdha11-201ENSMUST00000115658 Lce1a1Q9CQH5 143 aa3.82□□□□□ -1.8
Pcdha11-201ENSMUST00000115658 Syne2Q6ZWQ0 6874 aaKnown RBP3.77□□□□□ -1.81
Pcdha11-201ENSMUST00000115658 2300003K06RikA2A4M0 262 aa3.77□□□□□ -1.81
Pcdha11-201ENSMUST00000115658 A030003K21RikA0A1Y7VIM3 128 aa3.73□□□□□ -1.81
Pcdha11-201ENSMUST00000115658 Krtap4-7Q9D732 168 aa3.73□□□□□ -1.81
Pcdha11-201ENSMUST00000115658 Krtap4-13Q9D7P3 165 aa3.73□□□□□ -1.81
Pcdha11-201ENSMUST00000115658 Mt3P28184 68 aa3.73□□□□□ -1.81
Pcdha11-201ENSMUST00000115658 SspoQ8CG65 4998 aa3.69□□□□□ -1.82
Pcdha11-201ENSMUST00000115658 A0A1Y7VJH8 109 aa3.66□□□□□ -1.82
Pcdha11-201ENSMUST00000115658 Krtap28-10A0A1Y7VP58 119 aa3.61□□□□□ -1.83
Pcdha11-201ENSMUST00000115658 Lce1kJ3QP15 125 aa3.56□□□□□ -1.84
Pcdha11-201ENSMUST00000115658 Krtap6-3A0A087WQL6 57 aa3.52□□□□□ -1.85
Pcdha11-201ENSMUST00000115658 Mt1P02802 61 aaKnown RBP3.5□□□□□ -1.85
Pcdha11-201ENSMUST00000115658 Gm7544A0A1Y7VJ58 118 aa3.49□□□□□ -1.85
Pcdha11-201ENSMUST00000115658 Gm6217A0A1Y7VJK9 128 aa3.45□□□□□ -1.86
Pcdha11-201ENSMUST00000115658 A030005L19RikA0A1Y7VIU2 113 aa3.43□□□□□ -1.86
Pcdha11-201ENSMUST00000115658 Krtap28-13A0A087WQP5 138 aa3.38□□□□□ -1.87
Pcdha11-201ENSMUST00000115658 A030005K14RikA0A1Y7VNY1 122 aa3.34□□□□□ -1.87
Pcdha11-201ENSMUST00000115658 Sprr2bO70554 98 aa3.3□□□□□ -1.88
Pcdha11-201ENSMUST00000115658 Macf1Q9QXZ0 7354 aaKnown RBP3.27□□□□□ -1.89
Pcdha11-201ENSMUST00000115658 Gm11555B1AQ89 175 aa3.27□□□□□ -1.89
Pcdha11-201ENSMUST00000115658 Gm11554B1AQB2 190 aa3.27□□□□□ -1.89
Pcdha11-201ENSMUST00000115658 Muc16A0A140LJ72 8478 aa3.27□□□□□ -1.89
Pcdha11-201ENSMUST00000115658 Krtap20-2E9Q0A8 60 aa3.25□□□□□ -1.89
Pcdha11-201ENSMUST00000115658 A0A1Y7VJ07 166 aa3.17□□□□□ -1.9
Pcdha11-201ENSMUST00000115658 ObscnA2AAJ9 8891 aaKnown RBP3.14□□□□□ -1.91
Pcdha11-201ENSMUST00000115658 Eppk1Q8R0W0 6548 aa3.08□□□□□ -1.92
Pcdha11-201ENSMUST00000115658 NebE9Q1W3 7152 aa2.96□□□□□ -1.94
Pcdha11-201ENSMUST00000115658 DstQ91ZU6 7393 aaKnown RBP2.94□□□□□ -1.94
Pcdha11-201ENSMUST00000115658 Kmt2dQ6PDK2 5588 aa2.85□□□□□ -1.95
Pcdha11-201ENSMUST00000115658 1110025L11RikO09048 78 aa2.85□□□□□ -1.95
Pcdha11-201ENSMUST00000115658 Krtap6-5Q925H3 78 aa2.85□□□□□ -1.95
Pcdha11-201ENSMUST00000115658 A030014E15RikA0A1Y7VJV2 120 aa2.82□□□□□ -1.96
Pcdha11-201ENSMUST00000115658 Muc19Q6PZE0 7524 aa2.81□□□□□ -1.96
Pcdha11-201ENSMUST00000115658 Phgr1Q8K0G7 91 aa2.72□□□□□ -1.97
Pcdha11-201ENSMUST00000115658 Gm11568A2A4M2 211 aa2.71□□□□□ -1.98
Pcdha11-201ENSMUST00000115658 Krtap9-1Q64526 186 aa2.71□□□□□ -1.98
Pcdha11-201ENSMUST00000115658 Gm11559Q9D3H7 191 aa2.7□□□□□ -1.98
Pcdha11-201ENSMUST00000115658 Gm10229O08631 77 aa2.65□□□□□ -1.98
Pcdha11-201ENSMUST00000115658 Gm11639A0A1D5RLM8 5808 aa2.56□□□□□ -2
Pcdha11-201ENSMUST00000115658 Gpr98Q8VHN7 6298 aaKnown RBP2.55□□□□□ -2
Pcdha11-201ENSMUST00000115658 Krtap5-2Q9D5Z7 189 aa2.49□□□□□ -2.01
Pcdha11-201ENSMUST00000115658 Hmcn1D3YXG0 5634 aa2.44□□□□□ -2.02
Pcdha11-201ENSMUST00000115658 A0A286YCP9 139 aa2.43□□□□□ -2.02
Pcdha11-201ENSMUST00000115658 Gm4553A0A1B0GSA9 284 aa2.35□□□□□ -2.03
Pcdha11-201ENSMUST00000115658 Gm11567Q9D141 195 aa2.28□□□□□ -2.04
Pcdha11-201ENSMUST00000115658 Gm2431E9Q8S1 172 aa2.27□□□□□ -2.05
Pcdha11-201ENSMUST00000115658 Gm10153A0A1B0GRL1 320 aa2.17□□□□□ -2.06
Pcdha11-201ENSMUST00000115658 AhnakE9Q616 5656 aaKnown RBP2.16□□□□□ -2.06
Pcdha11-201ENSMUST00000115658 Gm45337A0A1B0GS71 263 aa2.09□□□□□ -2.07
Pcdha11-201ENSMUST00000115658 Krtap6-2O08884 159 aa2.08□□□□□ -2.08
Pcdha11-201ENSMUST00000115658 Krtap21-1Q925H4 128 aa2.08□□□□□ -2.08
Pcdha11-201ENSMUST00000115658 Gm40460A0A1B0GR10 244 aa2.04□□□□□ -2.08
Pcdha11-201ENSMUST00000115658 Gm7579A0A1B0GRJ4 243 aa2.04□□□□□ -2.08
Pcdha11-201ENSMUST00000115658 Krtap5-5Q2TA51 241 aa2.04□□□□□ -2.08
Pcdha11-201ENSMUST00000115658 Krtap5-4Q62220 223 aa2.04□□□□□ -2.08
Pcdha11-201ENSMUST00000115658 Gm39115A0A1B0GSH7 232 aa1.92□□□□□ -2.1
Pcdha11-201ENSMUST00000115658 Gm45618A0A1B0GSA0 219 aa1.66□□□□□ -2.14
Pcdha11-201ENSMUST00000115658 Gm29735A0A1B0GT06 219 aa1.51□□□□□ -2.17
Pcdha11-201ENSMUST00000115658 Krtap5-1Q64507 230 aa1.24□□□□□ -2.21
Pcdha11-201ENSMUST00000115658 Gm4559A4IF42 199 aa1.03□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 100 ms