RNA–Protein interactions for RNA: ENSMUST00000108858.7

Sparc-202, Transcript of SPARC, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sparc, Length 2,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sparc-202ENSMUST00000108858 Gm29735A0A1B0GT06 219 aa4.82□□□□□ -1.64
Sparc-202ENSMUST00000108858 Mt3P28184 68 aa4.82□□□□□ -1.64
Sparc-202ENSMUST00000108858 Tnp1P10856 55 aa4.8□□□□□ -1.64
Sparc-202ENSMUST00000108858 Krtap19-9aF8WH65 55 aa4.79□□□□□ -1.64
Sparc-202ENSMUST00000108858 SspoQ8CG65 4998 aa4.71□□□□□ -1.66
Sparc-202ENSMUST00000108858 Gm10061D3Z714 54 aa4.63□□□□□ -1.67
Sparc-202ENSMUST00000108858 Krtap19-2Q925I0 141 aa4.63□□□□□ -1.67
Sparc-202ENSMUST00000108858 Krtap8-1O08633 61 aa4.59□□□□□ -1.67
Sparc-202ENSMUST00000108858 2310046K23RikA0A0A6YVW6 87 aa4.55□□□□□ -1.68
Sparc-202ENSMUST00000108858 Gm11562A0PK51 136 aa4.52□□□□□ -1.69
Sparc-202ENSMUST00000108858 Krtap19-9bQ99NG9 58 aa4.51□□□□□ -1.69
Sparc-202ENSMUST00000108858 Lce1iQ9D6P5 149 aa4.46□□□□□ -1.69
Sparc-202ENSMUST00000108858 Lce1a2Q9D1K4 149 aa4.45□□□□□ -1.7
Sparc-202ENSMUST00000108858 Krtap4-8B1AQA8 209 aa4.43□□□□□ -1.7
Sparc-202ENSMUST00000108858 Muc5bE9Q5I3 4800 aa4.39□□□□□ -1.71
Sparc-202ENSMUST00000108858 Krtap4-13Q9D7P3 165 aa4.37□□□□□ -1.71
Sparc-202ENSMUST00000108858 Gm6358A0A087WPH4 74 aa4.36□□□□□ -1.71
Sparc-202ENSMUST00000108858 Gm10153A0A1B0GRL1 320 aa4.36□□□□□ -1.71
Sparc-202ENSMUST00000108858 Mt2P02798 61 aa4.29□□□□□ -1.72
Sparc-202ENSMUST00000108858 Krtap9-3Q3V2C1 136 aa4.27□□□□□ -1.73
Sparc-202ENSMUST00000108858 Gm45337A0A1B0GS71 263 aa4.27□□□□□ -1.73
Sparc-202ENSMUST00000108858 Krtap5-4Q62220 223 aa4.13□□□□□ -1.75
Sparc-202ENSMUST00000108858 Krtap22-2J3QNX6 67 aa4.09□□□□□ -1.76
Sparc-202ENSMUST00000108858 Sprr2gO70558 76 aa4.06□□□□□ -1.76
Sparc-202ENSMUST00000108858 4933428G20RikQ9D3X4 101 aa4.06□□□□□ -1.76
Sparc-202ENSMUST00000108858 Mdn1A2ANY6 5589 aaKnown RBP4.05□□□□□ -1.76
Sparc-202ENSMUST00000108858 Sprr2dO70555 85 aa3.98□□□□□ -1.77
Sparc-202ENSMUST00000108858 Krtap4-6Q3V4B7 195 aa3.95□□□□□ -1.78
Sparc-202ENSMUST00000108858 Gm11938Q9D3H4 131 aa3.94□□□□□ -1.78
Sparc-202ENSMUST00000108858 Syne2Q6ZWQ0 6874 aaKnown RBP3.87□□□□□ -1.79
Sparc-202ENSMUST00000108858 Gm11596B1AQB0 205 aa3.86□□□□□ -1.79
Sparc-202ENSMUST00000108858 Gm11568A2A4M2 211 aa3.83□□□□□ -1.8
Sparc-202ENSMUST00000108858 Krtap5-1Q64507 230 aa3.79□□□□□ -1.8
Sparc-202ENSMUST00000108858 Gm11564A2A4L9 201 aa3.76□□□□□ -1.81
Sparc-202ENSMUST00000108858 Gm4553A0A1B0GSA9 284 aa3.73□□□□□ -1.81
Sparc-202ENSMUST00000108858 Krtap9-1Q64526 186 aa3.71□□□□□ -1.81
Sparc-202ENSMUST00000108858 Krtap19-4Q925H7 84 aa3.71□□□□□ -1.82
Sparc-202ENSMUST00000108858 Gm4559A4IF42 199 aa3.69□□□□□ -1.82
Sparc-202ENSMUST00000108858 Mt4P47945 62 aa3.68□□□□□ -1.82
Sparc-202ENSMUST00000108858 Lce3bQ9CQM7 98 aa3.62□□□□□ -1.83
Sparc-202ENSMUST00000108858 Fsip2A2ARZ3 6995 aa3.61□□□□□ -1.83
Sparc-202ENSMUST00000108858 Sprr2iO70560 76 aa3.55□□□□□ -1.84
Sparc-202ENSMUST00000108858 Sprr2kO70562 68 aa3.53□□□□□ -1.84
Sparc-202ENSMUST00000108858 Syne1Q6ZWR6 8799 aa3.52□□□□□ -1.85
Sparc-202ENSMUST00000108858 Sprr2hO70559 108 aa3.47□□□□□ -1.85
Sparc-202ENSMUST00000108858 Lce3cQ91V05 98 aa3.47□□□□□ -1.85
Sparc-202ENSMUST00000108858 Lce3dE9Q8V1 98 aa3.45□□□□□ -1.86
Sparc-202ENSMUST00000108858 Gm7579A0A1B0GRJ4 243 aa3.44□□□□□ -1.86
Sparc-202ENSMUST00000108858 Sprr2eO70556 76 aa3.44□□□□□ -1.86
Sparc-202ENSMUST00000108858 Krtap6-3A0A087WQL6 57 aa3.38□□□□□ -1.87
Sparc-202ENSMUST00000108858 Lce3eF8VQJ0 98 aa3.38□□□□□ -1.87
Sparc-202ENSMUST00000108858 Lce3fQ6PAI4 98 aa3.38□□□□□ -1.87
Sparc-202ENSMUST00000108858 Sprr2fO70557 76 aa3.37□□□□□ -1.87
Sparc-202ENSMUST00000108858 Hmcn1D3YXG0 5634 aa3.36□□□□□ -1.87
Sparc-202ENSMUST00000108858 Krtap5-5Q2TA51 241 aa3.34□□□□□ -1.87
Sparc-202ENSMUST00000108858 Krtap5-2Q9D5Z7 189 aa3.34□□□□□ -1.87
Sparc-202ENSMUST00000108858 Lce3aQ497I5 98 aa3.33□□□□□ -1.88
Sparc-202ENSMUST00000108858 Gpr98Q8VHN7 6298 aaKnown RBP3.31□□□□□ -1.88
Sparc-202ENSMUST00000108858 Mt1P02802 61 aaKnown RBP3.27□□□□□ -1.89
Sparc-202ENSMUST00000108858 ObscnA2AAJ9 8891 aaKnown RBP3.24□□□□□ -1.89
Sparc-202ENSMUST00000108858 Eppk1Q8R0W0 6548 aa3.23□□□□□ -1.89
Sparc-202ENSMUST00000108858 Krtap20-2E9Q0A8 60 aa3.22□□□□□ -1.89
Sparc-202ENSMUST00000108858 Gm11639A0A1D5RLM8 5808 aa3.08□□□□□ -1.92
Sparc-202ENSMUST00000108858 Gm40460A0A1B0GR10 244 aa3.04□□□□□ -1.92
Sparc-202ENSMUST00000108858 Krtap4-16Q91W93 202 aa3.04□□□□□ -1.92
Sparc-202ENSMUST00000108858 Macf1Q9QXZ0 7354 aaKnown RBP2.93□□□□□ -1.94
Sparc-202ENSMUST00000108858 Gm10024A0A0A0MQA4 119 aa2.91□□□□□ -1.94
Sparc-202ENSMUST00000108858 Gm10229O08631 77 aa2.84□□□□□ -1.95
Sparc-202ENSMUST00000108858 Kmt2dQ6PDK2 5588 aa2.8□□□□□ -1.96
Sparc-202ENSMUST00000108858 DstQ91ZU6 7393 aaKnown RBP2.76□□□□□ -1.97
Sparc-202ENSMUST00000108858 Krtap6-5Q925H3 78 aa2.72□□□□□ -1.97
Sparc-202ENSMUST00000108858 Muc19Q6PZE0 7524 aa2.64□□□□□ -1.99
Sparc-202ENSMUST00000108858 NebE9Q1W3 7152 aa2.49□□□□□ -2.01
Sparc-202ENSMUST00000108858 1110025L11RikO09048 78 aa2.48□□□□□ -2.01
Sparc-202ENSMUST00000108858 Muc16A0A140LJ72 8478 aa2.44□□□□□ -2.02
Sparc-202ENSMUST00000108858 AhnakE9Q616 5656 aaKnown RBP2.42□□□□□ -2.02
Sparc-202ENSMUST00000108858 Sprr2bO70554 98 aa2.38□□□□□ -2.03
Sparc-202ENSMUST00000108858 Krtap6-2O08884 159 aa2.27□□□□□ -2.05
Sparc-202ENSMUST00000108858 Phgr1Q8K0G7 91 aa2.03□□□□□ -2.08
Sparc-202ENSMUST00000108858 Krtap21-1Q925H4 128 aa2.03□□□□□ -2.08
Retrieved 80 of 22,080 RNA–protein pairs in 69.7 ms