RNA–Protein interactions for RNA: ENSMUST00000108677.1

Usp43-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp43, Length 4,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43-202ENSMUST00000108677 Muc5bE9Q5I3 4800 aa5.02□□□□□ -1.61
Usp43-202ENSMUST00000108677 Krtap4-1Q3UUY3 169 aa5□□□□□ -1.61
Usp43-202ENSMUST00000108677 Krtap19-4Q925H7 84 aa4.99□□□□□ -1.61
Usp43-202ENSMUST00000108677 Syne2Q6ZWQ0 6874 aaKnown RBP4.93□□□□□ -1.62
Usp43-202ENSMUST00000108677 SspoQ8CG65 4998 aa4.91□□□□□ -1.62
Usp43-202ENSMUST00000108677 Krtap4-9B1AQA9 244 aa4.88□□□□□ -1.63
Usp43-202ENSMUST00000108677 Gm11938Q9D3H4 131 aa4.88□□□□□ -1.63
Usp43-202ENSMUST00000108677 Macf1Q9QXZ0 7354 aaKnown RBP4.87□□□□□ -1.63
Usp43-202ENSMUST00000108677 Gm11564A2A4L9 201 aa4.85□□□□□ -1.63
Usp43-202ENSMUST00000108677 Gm11563B1AQ90 168 aa4.85□□□□□ -1.63
Usp43-202ENSMUST00000108677 Gm11595B1AQA7 289 aa4.85□□□□□ -1.63
Usp43-202ENSMUST00000108677 Krtap4-8B1AQA8 209 aa4.85□□□□□ -1.63
Usp43-202ENSMUST00000108677 Gm11596B1AQB0 205 aa4.83□□□□□ -1.64
Usp43-202ENSMUST00000108677 Sprr2dO70555 85 aa4.81□□□□□ -1.64
Usp43-202ENSMUST00000108677 Gm10024A0A0A0MQA4 119 aa4.8□□□□□ -1.64
Usp43-202ENSMUST00000108677 2300003K06RikA2A4M0 262 aa4.79□□□□□ -1.64
Usp43-202ENSMUST00000108677 ObscnA2AAJ9 8891 aaKnown RBP4.77□□□□□ -1.65
Usp43-202ENSMUST00000108677 Sprr2eO70556 76 aa4.76□□□□□ -1.65
Usp43-202ENSMUST00000108677 Krtap4-13Q9D7P3 165 aa4.76□□□□□ -1.65
Usp43-202ENSMUST00000108677 Gm11562A0PK51 136 aa4.7□□□□□ -1.66
Usp43-202ENSMUST00000108677 Krtap4-7Q9D732 168 aa4.69□□□□□ -1.66
Usp43-202ENSMUST00000108677 Lce1kJ3QP15 125 aa4.67□□□□□ -1.66
Usp43-202ENSMUST00000108677 Krtap31-1Q9D644 177 aa4.6□□□□□ -1.67
Usp43-202ENSMUST00000108677 Sprr2fO70557 76 aa4.57□□□□□ -1.68
Usp43-202ENSMUST00000108677 Lce1a1Q9CQH5 143 aa4.54□□□□□ -1.68
Usp43-202ENSMUST00000108677 Sprr2hO70559 108 aa4.49□□□□□ -1.69
Usp43-202ENSMUST00000108677 Krtap4-16Q91W93 202 aa4.45□□□□□ -1.7
Usp43-202ENSMUST00000108677 Muc19Q6PZE0 7524 aa4.36□□□□□ -1.71
Usp43-202ENSMUST00000108677 DstQ91ZU6 7393 aaKnown RBP4.25□□□□□ -1.73
Usp43-202ENSMUST00000108677 Krtap20-2E9Q0A8 60 aa4.22□□□□□ -1.73
Usp43-202ENSMUST00000108677 Mt3P28184 68 aa4.19□□□□□ -1.74
Usp43-202ENSMUST00000108677 Gm11554B1AQB2 190 aa4.18□□□□□ -1.74
Usp43-202ENSMUST00000108677 Mt1P02802 61 aaKnown RBP4.16□□□□□ -1.74
Usp43-202ENSMUST00000108677 NebE9Q1W3 7152 aa4.14□□□□□ -1.75
Usp43-202ENSMUST00000108677 Gm11555B1AQ89 175 aa4.09□□□□□ -1.75
Usp43-202ENSMUST00000108677 Krtap6-3A0A087WQL6 57 aa4.06□□□□□ -1.76
Usp43-202ENSMUST00000108677 Kmt2dQ6PDK2 5588 aa3.9□□□□□ -1.79
Usp43-202ENSMUST00000108677 Eppk1Q8R0W0 6548 aa3.69□□□□□ -1.82
Usp43-202ENSMUST00000108677 Gm11568A2A4M2 211 aa3.6□□□□□ -1.83
Usp43-202ENSMUST00000108677 Krtap9-1Q64526 186 aa3.6□□□□□ -1.83
Usp43-202ENSMUST00000108677 Sprr2bO70554 98 aa3.45□□□□□ -1.86
Usp43-202ENSMUST00000108677 Hmcn1D3YXG0 5634 aa3.44□□□□□ -1.86
Usp43-202ENSMUST00000108677 1110025L11RikO09048 78 aa3.37□□□□□ -1.87
Usp43-202ENSMUST00000108677 Krtap6-5Q925H3 78 aa3.37□□□□□ -1.87
Usp43-202ENSMUST00000108677 Gpr98Q8VHN7 6298 aaKnown RBP3.36□□□□□ -1.87
Usp43-202ENSMUST00000108677 Krtap31-2Q8CAY5 177 aa3.35□□□□□ -1.87
Usp43-202ENSMUST00000108677 Gm11559Q9D3H7 191 aa3.34□□□□□ -1.87
Usp43-202ENSMUST00000108677 Gm11639A0A1D5RLM8 5808 aa3.34□□□□□ -1.88
Usp43-202ENSMUST00000108677 A0A1Y7VJH8 109 aa3.2□□□□□ -1.9
Usp43-202ENSMUST00000108677 Krtap5-2Q9D5Z7 189 aa3.2□□□□□ -1.9
Usp43-202ENSMUST00000108677 Gm10229O08631 77 aa3.1□□□□□ -1.91
Usp43-202ENSMUST00000108677 Krtap28-10A0A1Y7VP58 119 aa3.09□□□□□ -1.91
Usp43-202ENSMUST00000108677 Gm10153A0A1B0GRL1 320 aa2.97□□□□□ -1.93
Usp43-202ENSMUST00000108677 Gm4553A0A1B0GSA9 284 aa2.96□□□□□ -1.93
Usp43-202ENSMUST00000108677 A0A1Y7VLE6 161 aa2.93□□□□□ -1.94
Usp43-202ENSMUST00000108677 Phgr1Q8K0G7 91 aa2.92□□□□□ -1.94
Usp43-202ENSMUST00000108677 A030005L19RikA0A1Y7VIU2 113 aa2.92□□□□□ -1.94
Usp43-202ENSMUST00000108677 Krtap28-13A0A087WQP5 138 aa2.9□□□□□ -1.95
Usp43-202ENSMUST00000108677 Gm2431E9Q8S1 172 aa2.88□□□□□ -1.95
Usp43-202ENSMUST00000108677 Gm7544A0A1Y7VJ58 118 aa2.85□□□□□ -1.95
Usp43-202ENSMUST00000108677 A030005K14RikA0A1Y7VNY1 122 aa2.84□□□□□ -1.96
Usp43-202ENSMUST00000108677 AhnakE9Q616 5656 aaKnown RBP2.84□□□□□ -1.96
Usp43-202ENSMUST00000108677 Gm45337A0A1B0GS71 263 aa2.82□□□□□ -1.96
Usp43-202ENSMUST00000108677 Gm40460A0A1B0GR10 244 aa2.74□□□□□ -1.97
Usp43-202ENSMUST00000108677 Gm7579A0A1B0GRJ4 243 aa2.74□□□□□ -1.97
Usp43-202ENSMUST00000108677 Krtap5-5Q2TA51 241 aa2.74□□□□□ -1.97
Usp43-202ENSMUST00000108677 Krtap5-4Q62220 223 aa2.74□□□□□ -1.97
Usp43-202ENSMUST00000108677 Krtap6-2O08884 159 aa2.57□□□□□ -2
Usp43-202ENSMUST00000108677 A030003K21RikA0A1Y7VIM3 128 aa2.53□□□□□ -2
Usp43-202ENSMUST00000108677 Krtap21-1Q925H4 128 aa2.51□□□□□ -2.01
Usp43-202ENSMUST00000108677 Gm39115A0A1B0GSH7 232 aa2.51□□□□□ -2.01
Usp43-202ENSMUST00000108677 A0A1Y7VJ07 166 aa2.51□□□□□ -2.01
Usp43-202ENSMUST00000108677 Gm6217A0A1Y7VJK9 128 aa2.48□□□□□ -2.01
Usp43-202ENSMUST00000108677 A0A286YCP9 139 aa2.45□□□□□ -2.02
Usp43-202ENSMUST00000108677 Gm11567Q9D141 195 aa2.38□□□□□ -2.03
Usp43-202ENSMUST00000108677 A030014E15RikA0A1Y7VJV2 120 aa2.35□□□□□ -2.03
Usp43-202ENSMUST00000108677 Gm45618A0A1B0GSA0 219 aa2.14□□□□□ -2.07
Usp43-202ENSMUST00000108677 Gm29735A0A1B0GT06 219 aa2.08□□□□□ -2.08
Usp43-202ENSMUST00000108677 Krtap5-1Q64507 230 aa1.47□□□□□ -2.17
Usp43-202ENSMUST00000108677 Gm4559A4IF42 199 aa1.19□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 20.4 ms