RNA–Protein interactions for RNA: ENSMUST00000105490.2

Prdm1-202, Transcript of PR domain zinc finger protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prdm1, Length 4,025 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1-202ENSMUST00000105490 Lce3eF8VQJ0 98 aa3.47□□□□□ -1.85
Prdm1-202ENSMUST00000105490 Lce3fQ6PAI4 98 aa3.47□□□□□ -1.85
Prdm1-202ENSMUST00000105490 Gm10061D3Z714 54 aa3.44□□□□□ -1.86
Prdm1-202ENSMUST00000105490 Lce1eQ9D139 143 aa3.44□□□□□ -1.86
Prdm1-202ENSMUST00000105490 Lce3aQ497I5 98 aa3.4□□□□□ -1.87
Prdm1-202ENSMUST00000105490 Lce1cQ9D1C5 147 aa3.38□□□□□ -1.87
Prdm1-202ENSMUST00000105490 SspoQ8CG65 4998 aa3.35□□□□□ -1.87
Prdm1-202ENSMUST00000105490 ObscnA2AAJ9 8891 aaKnown RBP3.34□□□□□ -1.87
Prdm1-202ENSMUST00000105490 Sprr2dO70555 85 aa3.32□□□□□ -1.88
Prdm1-202ENSMUST00000105490 Sprr2kO70562 68 aa3.29□□□□□ -1.88
Prdm1-202ENSMUST00000105490 A0A286YCP9 139 aa3.28□□□□□ -1.89
Prdm1-202ENSMUST00000105490 Krtap19-4Q925H7 84 aa3.28□□□□□ -1.89
Prdm1-202ENSMUST00000105490 Gm11569B1AQB1 180 aa3.27□□□□□ -1.89
Prdm1-202ENSMUST00000105490 Gm38119A0A0A6YX29 146 aa3.27□□□□□ -1.89
Prdm1-202ENSMUST00000105490 Krtap4-16Q91W93 202 aa3.27□□□□□ -1.89
Prdm1-202ENSMUST00000105490 Lce1gQ9D195 139 aa3.26□□□□□ -1.89
Prdm1-202ENSMUST00000105490 Lce1fB9EJP6 147 aa3.25□□□□□ -1.89
Prdm1-202ENSMUST00000105490 Lce1a1Q9CQH5 143 aa3.25□□□□□ -1.89
Prdm1-202ENSMUST00000105490 Gm11559Q9D3H7 191 aa3.24□□□□□ -1.89
Prdm1-202ENSMUST00000105490 Muc5bE9Q5I3 4800 aa3.24□□□□□ -1.89
Prdm1-202ENSMUST00000105490 Fsip2A2ARZ3 6995 aa3.23□□□□□ -1.89
Prdm1-202ENSMUST00000105490 Sprr2iO70560 76 aa3.17□□□□□ -1.9
Prdm1-202ENSMUST00000105490 Sprr2fO70557 76 aa3.16□□□□□ -1.9
Prdm1-202ENSMUST00000105490 Gm11562A0PK51 136 aa3.12□□□□□ -1.91
Prdm1-202ENSMUST00000105490 Lce1lQ9D1G7 135 aa3.12□□□□□ -1.91
Prdm1-202ENSMUST00000105490 A0A1Y7VJ07 166 aa3.11□□□□□ -1.91
Prdm1-202ENSMUST00000105490 Syne2Q6ZWQ0 6874 aaKnown RBP3.11□□□□□ -1.91
Prdm1-202ENSMUST00000105490 Gm10024A0A0A0MQA4 119 aa3.09□□□□□ -1.91
Prdm1-202ENSMUST00000105490 Sprr2hO70559 108 aa3.07□□□□□ -1.92
Prdm1-202ENSMUST00000105490 Krtap4-6Q3V4B7 195 aa3.05□□□□□ -1.92
Prdm1-202ENSMUST00000105490 Macf1Q9QXZ0 7354 aaKnown RBP3□□□□□ -1.93
Prdm1-202ENSMUST00000105490 Mt4P47945 62 aa2.98□□□□□ -1.93
Prdm1-202ENSMUST00000105490 Sprr2eO70556 76 aa2.98□□□□□ -1.93
Prdm1-202ENSMUST00000105490 Muc19Q6PZE0 7524 aa2.91□□□□□ -1.94
Prdm1-202ENSMUST00000105490 A030014E15RikA0A1Y7VJV2 120 aa2.86□□□□□ -1.95
Prdm1-202ENSMUST00000105490 Gm11596B1AQB0 205 aa2.86□□□□□ -1.95
Prdm1-202ENSMUST00000105490 Gm11564A2A4L9 201 aa2.85□□□□□ -1.95
Prdm1-202ENSMUST00000105490 Gm11595B1AQA7 289 aa2.85□□□□□ -1.95
Prdm1-202ENSMUST00000105490 Krtap4-8B1AQA8 209 aa2.85□□□□□ -1.95
Prdm1-202ENSMUST00000105490 Krtap4-9B1AQA9 244 aa2.83□□□□□ -1.96
Prdm1-202ENSMUST00000105490 Lce1kJ3QP15 125 aa2.83□□□□□ -1.96
Prdm1-202ENSMUST00000105490 2300003K06RikA2A4M0 262 aa2.77□□□□□ -1.97
Prdm1-202ENSMUST00000105490 Krtap4-13Q9D7P3 165 aa2.75□□□□□ -1.97
Prdm1-202ENSMUST00000105490 DstQ91ZU6 7393 aaKnown RBP2.65□□□□□ -1.98
Prdm1-202ENSMUST00000105490 Mt1P02802 61 aaKnown RBP2.61□□□□□ -1.99
Prdm1-202ENSMUST00000105490 Mt3P28184 68 aa2.5□□□□□ -2.01
Prdm1-202ENSMUST00000105490 Krtap20-2E9Q0A8 60 aa2.49□□□□□ -2.01
Prdm1-202ENSMUST00000105490 Krtap6-3A0A087WQL6 57 aa2.47□□□□□ -2.01
Prdm1-202ENSMUST00000105490 NebE9Q1W3 7152 aa2.43□□□□□ -2.02
Prdm1-202ENSMUST00000105490 Krtap9-1Q64526 186 aa2.39□□□□□ -2.03
Prdm1-202ENSMUST00000105490 Gm11554B1AQB2 190 aa2.37□□□□□ -2.03
Prdm1-202ENSMUST00000105490 Gm11568A2A4M2 211 aa2.35□□□□□ -2.03
Prdm1-202ENSMUST00000105490 Eppk1Q8R0W0 6548 aa2.29□□□□□ -2.04
Prdm1-202ENSMUST00000105490 Kmt2dQ6PDK2 5588 aa2.29□□□□□ -2.04
Prdm1-202ENSMUST00000105490 Gpr98Q8VHN7 6298 aaKnown RBP2.25□□□□□ -2.05
Prdm1-202ENSMUST00000105490 Hmcn1D3YXG0 5634 aa2.22□□□□□ -2.05
Prdm1-202ENSMUST00000105490 Krtap5-2Q9D5Z7 189 aa2.2□□□□□ -2.06
Prdm1-202ENSMUST00000105490 1110025L11RikO09048 78 aa2.14□□□□□ -2.07
Prdm1-202ENSMUST00000105490 Krtap6-5Q925H3 78 aa2.14□□□□□ -2.07
Prdm1-202ENSMUST00000105490 Gm10153A0A1B0GRL1 320 aa2.08□□□□□ -2.08
Prdm1-202ENSMUST00000105490 Sprr2bO70554 98 aa2.07□□□□□ -2.08
Prdm1-202ENSMUST00000105490 Phgr1Q8K0G7 91 aa2.03□□□□□ -2.08
Prdm1-202ENSMUST00000105490 Gm4553A0A1B0GSA9 284 aa2.03□□□□□ -2.08
Prdm1-202ENSMUST00000105490 Gm2431E9Q8S1 172 aa1.99□□□□□ -2.09
Prdm1-202ENSMUST00000105490 Gm45618A0A1B0GSA0 219 aa1.96□□□□□ -2.1
Prdm1-202ENSMUST00000105490 Gm11639A0A1D5RLM8 5808 aa1.96□□□□□ -2.1
Prdm1-202ENSMUST00000105490 Gm45337A0A1B0GS71 263 aa1.95□□□□□ -2.1
Prdm1-202ENSMUST00000105490 Gm10229O08631 77 aa1.94□□□□□ -2.1
Prdm1-202ENSMUST00000105490 Gm39115A0A1B0GSH7 232 aa1.9□□□□□ -2.11
Prdm1-202ENSMUST00000105490 Gm40460A0A1B0GR10 244 aa1.88□□□□□ -2.11
Prdm1-202ENSMUST00000105490 Gm7579A0A1B0GRJ4 243 aa1.88□□□□□ -2.11
Prdm1-202ENSMUST00000105490 Krtap5-5Q2TA51 241 aa1.88□□□□□ -2.11
Prdm1-202ENSMUST00000105490 Krtap5-4Q62220 223 aa1.88□□□□□ -2.11
Prdm1-202ENSMUST00000105490 AhnakE9Q616 5656 aaKnown RBP1.8□□□□□ -2.12
Prdm1-202ENSMUST00000105490 Gm11567Q9D141 195 aa1.76□□□□□ -2.13
Prdm1-202ENSMUST00000105490 Krtap21-1Q925H4 128 aa1.64□□□□□ -2.15
Prdm1-202ENSMUST00000105490 Krtap6-2O08884 159 aa1.59□□□□□ -2.16
Prdm1-202ENSMUST00000105490 Gm29735A0A1B0GT06 219 aa1.52□□□□□ -2.17
Prdm1-202ENSMUST00000105490 Krtap5-1Q64507 230 aa1.49□□□□□ -2.17
Prdm1-202ENSMUST00000105490 Gm4559A4IF42 199 aa1.32□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 63.8 ms