RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Krtap7-1Q9D3I6 87 aa4.8□□□□□ -1.64
Ccdc60-202ENSMUST00000086483 Krtap3-1A2A591 98 aa4.76□□□□□ -1.65
Ccdc60-202ENSMUST00000086483 Lce1a2Q9D1K4 149 aa4.71□□□□□ -1.66
Ccdc60-202ENSMUST00000086483 Eppk1Q8R0W0 6548 aa4.71□□□□□ -1.66
Ccdc60-202ENSMUST00000086483 2310046K23RikA0A0A6YVW6 87 aa4.7□□□□□ -1.66
Ccdc60-202ENSMUST00000086483 Krtap22-2J3QNX6 67 aa4.67□□□□□ -1.66
Ccdc60-202ENSMUST00000086483 BC029722A0A0N4SW31 51 aa4.65□□□□□ -1.67
Ccdc60-202ENSMUST00000086483 Spink7Q6IE32 76 aa4.63□□□□□ -1.67
Ccdc60-202ENSMUST00000086483 Camk2n1Q6QWF9 78 aa4.55□□□□□ -1.68
Ccdc60-202ENSMUST00000086483 Gm17402F6Z0L5 76 aa4.54□□□□□ -1.68
Ccdc60-202ENSMUST00000086483 Gm19668J3QMD1 248 aa4.47□□□□□ -1.69
Ccdc60-202ENSMUST00000086483 Lce1dQ9D731 133 aa4.43□□□□□ -1.7
Ccdc60-202ENSMUST00000086483 Gm11559Q9D3H7 191 aa4.41□□□□□ -1.7
Ccdc60-202ENSMUST00000086483 Gm11639A0A1D5RLM8 5808 aa4.39□□□□□ -1.71
Ccdc60-202ENSMUST00000086483 Krtap5-2Q9D5Z7 189 aa4.39□□□□□ -1.71
Ccdc60-202ENSMUST00000086483 Sprr2a3Q4KL71 83 aa4.33□□□□□ -1.72
Ccdc60-202ENSMUST00000086483 Sprr2a1Q9CQK8 83 aa4.33□□□□□ -1.72
Ccdc60-202ENSMUST00000086483 Gm11554B1AQB2 190 aa4.3□□□□□ -1.72
Ccdc60-202ENSMUST00000086483 Gm4553A0A1B0GSA9 284 aa4.27□□□□□ -1.73
Ccdc60-202ENSMUST00000086483 Kmt2dQ6PDK2 5588 aa4.25□□□□□ -1.73
Ccdc60-202ENSMUST00000086483 Sprr2iO70560 76 aa4.25□□□□□ -1.73
Ccdc60-202ENSMUST00000086483 Gpr98Q8VHN7 6298 aaKnown RBP4.2□□□□□ -1.74
Ccdc60-202ENSMUST00000086483 Lce1kJ3QP15 125 aa4.19□□□□□ -1.74
Ccdc60-202ENSMUST00000086483 Macf1Q9QXZ0 7354 aaKnown RBP4.15□□□□□ -1.75
Ccdc60-202ENSMUST00000086483 Gm2431E9Q8S1 172 aa4.11□□□□□ -1.75
Ccdc60-202ENSMUST00000086483 Tnp1P10856 55 aa4.11□□□□□ -1.75
Ccdc60-202ENSMUST00000086483 Gm11568A2A4M2 211 aa4.09□□□□□ -1.76
Ccdc60-202ENSMUST00000086483 Krtap9-1Q64526 186 aa4.09□□□□□ -1.76
Ccdc60-202ENSMUST00000086483 Krtap19-9bQ99NG9 58 aa4.08□□□□□ -1.76
Ccdc60-202ENSMUST00000086483 Muc19Q6PZE0 7524 aa4.05□□□□□ -1.76
Ccdc60-202ENSMUST00000086483 Gm45337A0A1B0GS71 263 aa4.03□□□□□ -1.76
Ccdc60-202ENSMUST00000086483 Lce3bQ9CQM7 98 aa3.93□□□□□ -1.78
Ccdc60-202ENSMUST00000086483 Gm39115A0A1B0GSH7 232 aa3.92□□□□□ -1.78
Ccdc60-202ENSMUST00000086483 Gm40460A0A1B0GR10 244 aa3.88□□□□□ -1.79
Ccdc60-202ENSMUST00000086483 Gm7579A0A1B0GRJ4 243 aa3.88□□□□□ -1.79
Ccdc60-202ENSMUST00000086483 Krtap5-5Q2TA51 241 aa3.88□□□□□ -1.79
Ccdc60-202ENSMUST00000086483 Krtap5-4Q62220 223 aa3.88□□□□□ -1.79
Ccdc60-202ENSMUST00000086483 Lce1fB9EJP6 147 aa3.86□□□□□ -1.79
Ccdc60-202ENSMUST00000086483 Lce1cQ9D1C5 147 aa3.86□□□□□ -1.79
Ccdc60-202ENSMUST00000086483 Syne1Q6ZWR6 8799 aa3.85□□□□□ -1.79
Ccdc60-202ENSMUST00000086483 Krtap4-16Q91W93 202 aa3.84□□□□□ -1.79
Ccdc60-202ENSMUST00000086483 Krtap19-4Q925H7 84 aa3.82□□□□□ -1.8
Ccdc60-202ENSMUST00000086483 Gm10153A0A1B0GRL1 320 aa3.8□□□□□ -1.8
Ccdc60-202ENSMUST00000086483 Hmcn1D3YXG0 5634 aa3.78□□□□□ -1.8
Ccdc60-202ENSMUST00000086483 Gm45618A0A1B0GSA0 219 aa3.76□□□□□ -1.81
Ccdc60-202ENSMUST00000086483 DstQ91ZU6 7393 aaKnown RBP3.74□□□□□ -1.81
Ccdc60-202ENSMUST00000086483 NebE9Q1W3 7152 aa3.74□□□□□ -1.81
Ccdc60-202ENSMUST00000086483 Gm10272F7CZ33 110 aa3.69□□□□□ -1.82
Ccdc60-202ENSMUST00000086483 Gm11938Q9D3H4 131 aa3.69□□□□□ -1.82
Ccdc60-202ENSMUST00000086483 Sprr2fO70557 76 aa3.68□□□□□ -1.82
Ccdc60-202ENSMUST00000086483 Mt1P02802 61 aaKnown RBP3.63□□□□□ -1.83
Ccdc60-202ENSMUST00000086483 4933428G20RikQ9D3X4 101 aa3.59□□□□□ -1.83
Ccdc60-202ENSMUST00000086483 AhnakE9Q616 5656 aaKnown RBP3.52□□□□□ -1.85
Ccdc60-202ENSMUST00000086483 Krtap31-1Q9D644 177 aa3.47□□□□□ -1.85
Ccdc60-202ENSMUST00000086483 Mt3P28184 68 aa3.45□□□□□ -1.86
Ccdc60-202ENSMUST00000086483 Krtap31-2Q8CAY5 177 aa3.45□□□□□ -1.86
Ccdc60-202ENSMUST00000086483 Lce3cQ91V05 98 aa3.39□□□□□ -1.87
Ccdc60-202ENSMUST00000086483 Sprr2dO70555 85 aa3.38□□□□□ -1.87
Ccdc60-202ENSMUST00000086483 Lce3dE9Q8V1 98 aa3.35□□□□□ -1.87
Ccdc60-202ENSMUST00000086483 Gm10100J3QK64 120 aa3.24□□□□□ -1.89
Ccdc60-202ENSMUST00000086483 Gm29735A0A1B0GT06 219 aa3.18□□□□□ -1.9
Ccdc60-202ENSMUST00000086483 Gm11567Q9D141 195 aa3.17□□□□□ -1.9
Ccdc60-202ENSMUST00000086483 Lce3eF8VQJ0 98 aa3.15□□□□□ -1.9
Ccdc60-202ENSMUST00000086483 Lce3fQ6PAI4 98 aa3.15□□□□□ -1.9
Ccdc60-202ENSMUST00000086483 ObscnA2AAJ9 8891 aaKnown RBP3.14□□□□□ -1.91
Ccdc60-202ENSMUST00000086483 Sprr2eO70556 76 aa3.08□□□□□ -1.92
Ccdc60-202ENSMUST00000086483 Lce3aQ497I5 98 aa3.02□□□□□ -1.93
Ccdc60-202ENSMUST00000086483 Gm10142J3KMP7 120 aa2.97□□□□□ -1.93
Ccdc60-202ENSMUST00000086483 Sprr2hO70559 108 aa2.94□□□□□ -1.94
Ccdc60-202ENSMUST00000086483 Gm10024A0A0A0MQA4 119 aa2.91□□□□□ -1.94
Ccdc60-202ENSMUST00000086483 Muc16A0A140LJ72 8478 aa2.61□□□□□ -1.99
Ccdc60-202ENSMUST00000086483 1110025L11RikO09048 78 aa2.53□□□□□ -2
Ccdc60-202ENSMUST00000086483 Krtap6-5Q925H3 78 aa2.53□□□□□ -2
Ccdc60-202ENSMUST00000086483 Krtap5-1Q64507 230 aa2.47□□□□□ -2.01
Ccdc60-202ENSMUST00000086483 Gm4559A4IF42 199 aa2.39□□□□□ -2.03
Ccdc60-202ENSMUST00000086483 Gm10229O08631 77 aa2.29□□□□□ -2.04
Ccdc60-202ENSMUST00000086483 Sprr2bO70554 98 aa2.23□□□□□ -2.05
Ccdc60-202ENSMUST00000086483 Krtap6-2O08884 159 aa2.1□□□□□ -2.07
Ccdc60-202ENSMUST00000086483 Krtap21-1Q925H4 128 aa2.02□□□□□ -2.09
Ccdc60-202ENSMUST00000086483 Phgr1Q8K0G7 91 aa1.69□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 58.7 ms