RNA–Protein interactions for RNA: ENSMUST00000073961.7

Ptpre-201, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,410 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-201ENSMUST00000073961 Fat4Q2PZL6 4981 aa5,04□□□□□ -1,6
Ptpre-201ENSMUST00000073961 4932415D10RikA0A1W2P6U8 4986 aa5,03□□□□□ -1,6
Ptpre-201ENSMUST00000073961 ZanO88799 5376 aa5,02□□□□□ -1,61
Ptpre-201ENSMUST00000073961 Krtap17-1A2A5X6 109 aa4,98□□□□□ -1,61
Ptpre-201ENSMUST00000073961 Krtap4-1Q3UUY3 169 aa4,97□□□□□ -1,61
Ptpre-201ENSMUST00000073961 Syne1Q6ZWR6 8799 aa4,92□□□□□ -1,62
Ptpre-201ENSMUST00000073961 2300003K06RikA2A4M0 262 aa4,9□□□□□ -1,62
Ptpre-201ENSMUST00000073961 Muc5bE9Q5I3 4800 aa4,88□□□□□ -1,63
Ptpre-201ENSMUST00000073961 Gm11564A2A4L9 201 aa4,86□□□□□ -1,63
Ptpre-201ENSMUST00000073961 Gm11563B1AQ90 168 aa4,86□□□□□ -1,63
Ptpre-201ENSMUST00000073961 Gm11595B1AQA7 289 aa4,86□□□□□ -1,63
Ptpre-201ENSMUST00000073961 Krtap4-8B1AQA8 209 aa4,86□□□□□ -1,63
Ptpre-201ENSMUST00000073961 Gm11596B1AQB0 205 aa4,85□□□□□ -1,63
Ptpre-201ENSMUST00000073961 Lce1kJ3QP15 125 aa4,83□□□□□ -1,64
Ptpre-201ENSMUST00000073961 Krtap4-7Q9D732 168 aa4,83□□□□□ -1,64
Ptpre-201ENSMUST00000073961 Krtap4-9B1AQA9 244 aa4,82□□□□□ -1,64
Ptpre-201ENSMUST00000073961 Mt3P28184 68 aa4,81□□□□□ -1,64
Ptpre-201ENSMUST00000073961 Rnf213E9Q555 5152 aaKnown RBP4,79□□□□□ -1,64
Ptpre-201ENSMUST00000073961 Krtap4-16Q91W93 202 aa4,74□□□□□ -1,65
Ptpre-201ENSMUST00000073961 Krtap4-13Q9D7P3 165 aa4,69□□□□□ -1,66
Ptpre-201ENSMUST00000073961 Ush2AQ2QI47 5193 aa4,59□□□□□ -1,67
Ptpre-201ENSMUST00000073961 Mt1P02802 61 aaKnown RBP4,54□□□□□ -1,68
Ptpre-201ENSMUST00000073961 Lce1a1Q9CQH5 143 aa4,51□□□□□ -1,69
Ptpre-201ENSMUST00000073961 SspoQ8CG65 4998 aa4,51□□□□□ -1,69
Ptpre-201ENSMUST00000073961 Fsip2A2ARZ3 6995 aa4,43□□□□□ -1,7
Ptpre-201ENSMUST00000073961 Syne2Q6ZWQ0 6874 aaKnown RBP4,39□□□□□ -1,71
Ptpre-201ENSMUST00000073961 Krtap6-3A0A087WQL6 57 aa4,33□□□□□ -1,72
Ptpre-201ENSMUST00000073961 Muc16A0A140LJ72 8478 aa4,29□□□□□ -1,72
Ptpre-201ENSMUST00000073961 Sprr2bO70554 98 aa4,24□□□□□ -1,73
Ptpre-201ENSMUST00000073961 Gm11554B1AQB2 190 aa4,2□□□□□ -1,74
Ptpre-201ENSMUST00000073961 ObscnA2AAJ9 8891 aaKnown RBP4,16□□□□□ -1,74
Ptpre-201ENSMUST00000073961 Krtap20-2E9Q0A8 60 aa4,14□□□□□ -1,75
Ptpre-201ENSMUST00000073961 Krtap31-2Q8CAY5 177 aa4,01□□□□□ -1,77
Ptpre-201ENSMUST00000073961 1110025L11RikO09048 78 aa3,7□□□□□ -1,82
Ptpre-201ENSMUST00000073961 Krtap6-5Q925H3 78 aa3,7□□□□□ -1,82
Ptpre-201ENSMUST00000073961 Gm11555B1AQ89 175 aa3,69□□□□□ -1,82
Ptpre-201ENSMUST00000073961 Eppk1Q8R0W0 6548 aa3,69□□□□□ -1,82
Ptpre-201ENSMUST00000073961 Kmt2dQ6PDK2 5588 aa3,68□□□□□ -1,82
Ptpre-201ENSMUST00000073961 DstQ91ZU6 7393 aaKnown RBP3,58□□□□□ -1,84
Ptpre-201ENSMUST00000073961 Macf1Q9QXZ0 7354 aaKnown RBP3,5□□□□□ -1,85
Ptpre-201ENSMUST00000073961 Gm10229O08631 77 aa3,49□□□□□ -1,85
Ptpre-201ENSMUST00000073961 Gm11568A2A4M2 211 aa3,37□□□□□ -1,87
Ptpre-201ENSMUST00000073961 Krtap9-1Q64526 186 aa3,37□□□□□ -1,87
Ptpre-201ENSMUST00000073961 NebE9Q1W3 7152 aa3,36□□□□□ -1,87
Ptpre-201ENSMUST00000073961 Gm11559Q9D3H7 191 aa3,32□□□□□ -1,88
Ptpre-201ENSMUST00000073961 Phgr1Q8K0G7 91 aa3,31□□□□□ -1,88
Ptpre-201ENSMUST00000073961 A0A1Y7VLE6 161 aa3,29□□□□□ -1,88
Ptpre-201ENSMUST00000073961 Muc19Q6PZE0 7524 aa3,17□□□□□ -1,9
Ptpre-201ENSMUST00000073961 Gm11639A0A1D5RLM8 5808 aa3,08□□□□□ -1,92
Ptpre-201ENSMUST00000073961 A030003K21RikA0A1Y7VIM3 128 aa3,03□□□□□ -1,92
Ptpre-201ENSMUST00000073961 Krtap5-2Q9D5Z7 189 aa3□□□□□ -1,93
Ptpre-201ENSMUST00000073961 A0A1Y7VJH8 109 aa2,94□□□□□ -1,94
Ptpre-201ENSMUST00000073961 Krtap28-10A0A1Y7VP58 119 aa2,9□□□□□ -1,94
Ptpre-201ENSMUST00000073961 Gm6217A0A1Y7VJK9 128 aa2,84□□□□□ -1,96
Ptpre-201ENSMUST00000073961 A030005L19RikA0A1Y7VIU2 113 aa2,79□□□□□ -1,96
Ptpre-201ENSMUST00000073961 Gm4553A0A1B0GSA9 284 aa2,79□□□□□ -1,96
Ptpre-201ENSMUST00000073961 Gpr98Q8VHN7 6298 aaKnown RBP2,78□□□□□ -1,96
Ptpre-201ENSMUST00000073961 Krtap6-2O08884 159 aa2,78□□□□□ -1,96
Ptpre-201ENSMUST00000073961 Hmcn1D3YXG0 5634 aa2,78□□□□□ -1,97
Ptpre-201ENSMUST00000073961 Gm7544A0A1Y7VJ58 118 aa2,77□□□□□ -1,97
Ptpre-201ENSMUST00000073961 Krtap28-13A0A087WQP5 138 aa2,77□□□□□ -1,97
Ptpre-201ENSMUST00000073961 A030005K14RikA0A1Y7VNY1 122 aa2,72□□□□□ -1,97
Ptpre-201ENSMUST00000073961 A0A1Y7VJ07 166 aa2,71□□□□□ -1,98
Ptpre-201ENSMUST00000073961 Krtap21-1Q925H4 128 aa2,64□□□□□ -1,99
Ptpre-201ENSMUST00000073961 Gm2431E9Q8S1 172 aa2,6□□□□□ -1,99
Ptpre-201ENSMUST00000073961 Gm10153A0A1B0GRL1 320 aa2,59□□□□□ -1,99
Ptpre-201ENSMUST00000073961 AhnakE9Q616 5656 aaKnown RBP2,54□□□□□ -2
Ptpre-201ENSMUST00000073961 A030014E15RikA0A1Y7VJV2 120 aa2,51□□□□□ -2,01
Ptpre-201ENSMUST00000073961 Gm11567Q9D141 195 aa2,44□□□□□ -2,02
Ptpre-201ENSMUST00000073961 Gm45337A0A1B0GS71 263 aa2,42□□□□□ -2,02
Ptpre-201ENSMUST00000073961 Gm40460A0A1B0GR10 244 aa2,42□□□□□ -2,02
Ptpre-201ENSMUST00000073961 Gm7579A0A1B0GRJ4 243 aa2,42□□□□□ -2,02
Ptpre-201ENSMUST00000073961 Krtap5-5Q2TA51 241 aa2,42□□□□□ -2,02
Ptpre-201ENSMUST00000073961 Krtap5-4Q62220 223 aa2,42□□□□□ -2,02
Ptpre-201ENSMUST00000073961 Gm39115A0A1B0GSH7 232 aa2,19□□□□□ -2,06
Ptpre-201ENSMUST00000073961 A0A286YCP9 139 aa2,07□□□□□ -2,08
Ptpre-201ENSMUST00000073961 Gm45618A0A1B0GSA0 219 aa2,02□□□□□ -2,09
Ptpre-201ENSMUST00000073961 Gm29735A0A1B0GT06 219 aa1,85□□□□□ -2,11
Ptpre-201ENSMUST00000073961 Krtap5-1Q64507 230 aa1,37□□□□□ -2,19
Ptpre-201ENSMUST00000073961 Gm4559A4IF42 199 aa0,95□□□□□ -2,26
Retrieved 80 of 22,080 RNA–protein pairs in 5,2 ms