RNA–Protein interactions for RNA: ENSMUST00000062317.4

Shroom2-201, Transcript of Protein Shroom2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shroom2, Length 6,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2-201ENSMUST00000062317 Krtap4-2B1AQ85 167 aa3.21□□□□□ -1.89
Shroom2-201ENSMUST00000062317 Fsip2A2ARZ3 6995 aa3.19□□□□□ -1.9
Shroom2-201ENSMUST00000062317 Krtap4-1Q3UUY3 169 aa3.16□□□□□ -1.9
Shroom2-201ENSMUST00000062317 Rnf213E9Q555 5152 aaKnown RBP3.16□□□□□ -1.9
Shroom2-201ENSMUST00000062317 Krtap31-1Q9D644 177 aa3.12□□□□□ -1.91
Shroom2-201ENSMUST00000062317 Gm11938Q9D3H4 131 aa3.11□□□□□ -1.91
Shroom2-201ENSMUST00000062317 Syne2Q6ZWQ0 6874 aaKnown RBP3.1□□□□□ -1.91
Shroom2-201ENSMUST00000062317 2300003K06RikA2A4M0 262 aa3.08□□□□□ -1.92
Shroom2-201ENSMUST00000062317 Sprr2fO70557 76 aa3.07□□□□□ -1.92
Shroom2-201ENSMUST00000062317 Krtap4-9B1AQA9 244 aa3.07□□□□□ -1.92
Shroom2-201ENSMUST00000062317 Gm11564A2A4L9 201 aa3.06□□□□□ -1.92
Shroom2-201ENSMUST00000062317 Gm11563B1AQ90 168 aa3.06□□□□□ -1.92
Shroom2-201ENSMUST00000062317 Gm11595B1AQA7 289 aa3.06□□□□□ -1.92
Shroom2-201ENSMUST00000062317 Krtap4-8B1AQA8 209 aa3.06□□□□□ -1.92
Shroom2-201ENSMUST00000062317 Krtap4-16Q91W93 202 aa3.06□□□□□ -1.92
Shroom2-201ENSMUST00000062317 A030003K21RikA0A1Y7VIM3 128 aa3.04□□□□□ -1.92
Shroom2-201ENSMUST00000062317 Gm11596B1AQB0 205 aa3.04□□□□□ -1.92
Shroom2-201ENSMUST00000062317 Muc16A0A140LJ72 8478 aa3.03□□□□□ -1.92
Shroom2-201ENSMUST00000062317 Krtap4-13Q9D7P3 165 aa3.03□□□□□ -1.92
Shroom2-201ENSMUST00000062317 Sprr2dO70555 85 aa3.02□□□□□ -1.93
Shroom2-201ENSMUST00000062317 Lce1kJ3QP15 125 aa3.01□□□□□ -1.93
Shroom2-201ENSMUST00000062317 Krtap4-7Q9D732 168 aa3.01□□□□□ -1.93
Shroom2-201ENSMUST00000062317 Gm11562A0PK51 136 aa3.01□□□□□ -1.93
Shroom2-201ENSMUST00000062317 Muc5bE9Q5I3 4800 aa3□□□□□ -1.93
Shroom2-201ENSMUST00000062317 Lce1a1Q9CQH5 143 aa2.96□□□□□ -1.94
Shroom2-201ENSMUST00000062317 Sprr2hO70559 108 aa2.93□□□□□ -1.94
Shroom2-201ENSMUST00000062317 SspoQ8CG65 4998 aa2.85□□□□□ -1.95
Shroom2-201ENSMUST00000062317 Gm6217A0A1Y7VJK9 128 aa2.82□□□□□ -1.96
Shroom2-201ENSMUST00000062317 Mt3P28184 68 aa2.73□□□□□ -1.97
Shroom2-201ENSMUST00000062317 Krtap28-10A0A1Y7VP58 119 aa2.71□□□□□ -1.98
Shroom2-201ENSMUST00000062317 Gm11554B1AQB2 190 aa2.71□□□□□ -1.98
Shroom2-201ENSMUST00000062317 A0A1Y7VJ07 166 aa2.67□□□□□ -1.98
Shroom2-201ENSMUST00000062317 Mt1P02802 61 aaKnown RBP2.64□□□□□ -1.99
Shroom2-201ENSMUST00000062317 Macf1Q9QXZ0 7354 aaKnown RBP2.64□□□□□ -1.99
Shroom2-201ENSMUST00000062317 Krtap20-2E9Q0A8 60 aa2.63□□□□□ -1.99
Shroom2-201ENSMUST00000062317 ObscnA2AAJ9 8891 aaKnown RBP2.62□□□□□ -1.99
Shroom2-201ENSMUST00000062317 Krtap28-13A0A087WQP5 138 aa2.62□□□□□ -1.99
Shroom2-201ENSMUST00000062317 A0A1Y7VJH8 109 aa2.55□□□□□ -2
Shroom2-201ENSMUST00000062317 A030005L19RikA0A1Y7VIU2 113 aa2.54□□□□□ -2
Shroom2-201ENSMUST00000062317 A030005K14RikA0A1Y7VNY1 122 aa2.53□□□□□ -2
Shroom2-201ENSMUST00000062317 Krtap6-3A0A087WQL6 57 aa2.52□□□□□ -2.01
Shroom2-201ENSMUST00000062317 Gm7544A0A1Y7VJ58 118 aa2.5□□□□□ -2.01
Shroom2-201ENSMUST00000062317 Muc19Q6PZE0 7524 aa2.5□□□□□ -2.01
Shroom2-201ENSMUST00000062317 A030014E15RikA0A1Y7VJV2 120 aa2.5□□□□□ -2.01
Shroom2-201ENSMUST00000062317 Sprr2bO70554 98 aa2.43□□□□□ -2.02
Shroom2-201ENSMUST00000062317 NebE9Q1W3 7152 aa2.39□□□□□ -2.03
Shroom2-201ENSMUST00000062317 DstQ91ZU6 7393 aaKnown RBP2.34□□□□□ -2.04
Shroom2-201ENSMUST00000062317 Gm11555B1AQ89 175 aa2.31□□□□□ -2.04
Shroom2-201ENSMUST00000062317 Kmt2dQ6PDK2 5588 aa2.22□□□□□ -2.05
Shroom2-201ENSMUST00000062317 Krtap31-2Q8CAY5 177 aa2.21□□□□□ -2.06
Shroom2-201ENSMUST00000062317 Gm11568A2A4M2 211 aa2.16□□□□□ -2.06
Shroom2-201ENSMUST00000062317 Krtap9-1Q64526 186 aa2.16□□□□□ -2.06
Shroom2-201ENSMUST00000062317 1110025L11RikO09048 78 aa2.14□□□□□ -2.07
Shroom2-201ENSMUST00000062317 Krtap6-5Q925H3 78 aa2.14□□□□□ -2.07
Shroom2-201ENSMUST00000062317 Gm10229O08631 77 aa2.01□□□□□ -2.09
Shroom2-201ENSMUST00000062317 Gm11559Q9D3H7 191 aa2□□□□□ -2.09
Shroom2-201ENSMUST00000062317 Phgr1Q8K0G7 91 aa1.99□□□□□ -2.09
Shroom2-201ENSMUST00000062317 A0A286YCP9 139 aa1.93□□□□□ -2.1
Shroom2-201ENSMUST00000062317 Hmcn1D3YXG0 5634 aa1.89□□□□□ -2.11
Shroom2-201ENSMUST00000062317 Eppk1Q8R0W0 6548 aa1.85□□□□□ -2.11
Shroom2-201ENSMUST00000062317 Krtap5-2Q9D5Z7 189 aa1.77□□□□□ -2.13
Shroom2-201ENSMUST00000062317 Gm11639A0A1D5RLM8 5808 aa1.73□□□□□ -2.13
Shroom2-201ENSMUST00000062317 Gpr98Q8VHN7 6298 aaKnown RBP1.7□□□□□ -2.14
Shroom2-201ENSMUST00000062317 Gm2431E9Q8S1 172 aa1.63□□□□□ -2.15
Shroom2-201ENSMUST00000062317 Gm4553A0A1B0GSA9 284 aa1.62□□□□□ -2.15
Shroom2-201ENSMUST00000062317 Krtap6-2O08884 159 aa1.62□□□□□ -2.15
Shroom2-201ENSMUST00000062317 Gm10153A0A1B0GRL1 320 aa1.59□□□□□ -2.15
Shroom2-201ENSMUST00000062317 Krtap21-1Q925H4 128 aa1.55□□□□□ -2.16
Shroom2-201ENSMUST00000062317 AhnakE9Q616 5656 aaKnown RBP1.54□□□□□ -2.16
Shroom2-201ENSMUST00000062317 Gm11567Q9D141 195 aa1.41□□□□□ -2.18
Shroom2-201ENSMUST00000062317 Gm45337A0A1B0GS71 263 aa1.41□□□□□ -2.18
Shroom2-201ENSMUST00000062317 Gm40460A0A1B0GR10 244 aa1.36□□□□□ -2.19
Shroom2-201ENSMUST00000062317 Gm7579A0A1B0GRJ4 243 aa1.36□□□□□ -2.19
Shroom2-201ENSMUST00000062317 Krtap5-5Q2TA51 241 aa1.36□□□□□ -2.19
Shroom2-201ENSMUST00000062317 Krtap5-4Q62220 223 aa1.36□□□□□ -2.19
Shroom2-201ENSMUST00000062317 Gm39115A0A1B0GSH7 232 aa1.24□□□□□ -2.21
Shroom2-201ENSMUST00000062317 Gm29735A0A1B0GT06 219 aa1.01□□□□□ -2.25
Shroom2-201ENSMUST00000062317 Gm45618A0A1B0GSA0 219 aa1□□□□□ -2.25
Shroom2-201ENSMUST00000062317 Krtap5-1Q64507 230 aa0.89□□□□□ -2.27
Shroom2-201ENSMUST00000062317 Gm4559A4IF42 199 aa0.57□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 81.8 ms