RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 SspoQ8CG65 4998 aa1.66□□□□□ -2.14
Ush2a-201ENSMUST00000060479 Lce1bQ9D149 137 aa1.66□□□□□ -2.14
Ush2a-201ENSMUST00000060479 Lce1dQ9D731 133 aa1.66□□□□□ -2.14
Ush2a-201ENSMUST00000060479 Sprr2dO70555 85 aa1.65□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Lce1eQ9D139 143 aa1.64□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Lce1fB9EJP6 147 aa1.63□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Lce1cQ9D1C5 147 aa1.63□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Lce1lQ9D1G7 135 aa1.63□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Gm11569B1AQB1 180 aa1.62□□□□□ -2.15
Ush2a-201ENSMUST00000060479 NebE9Q1W3 7152 aa1.62□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Krtap4-2B1AQ85 167 aa1.61□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Gm11639A0A1D5RLM8 5808 aa1.6□□□□□ -2.15
Ush2a-201ENSMUST00000060479 DstQ91ZU6 7393 aaKnown RBP1.6□□□□□ -2.15
Ush2a-201ENSMUST00000060479 Gm11562A0PK51 136 aa1.58□□□□□ -2.16
Ush2a-201ENSMUST00000060479 Sprr2hO70559 108 aa1.56□□□□□ -2.16
Ush2a-201ENSMUST00000060479 Kmt2dQ6PDK2 5588 aa1.54□□□□□ -2.16
Ush2a-201ENSMUST00000060479 Syne1Q6ZWR6 8799 aa1.52□□□□□ -2.17
Ush2a-201ENSMUST00000060479 Mt4P47945 62 aa1.52□□□□□ -2.17
Ush2a-201ENSMUST00000060479 Krtap4-6Q3V4B7 195 aa1.51□□□□□ -2.17
Ush2a-201ENSMUST00000060479 Lce1a1Q9CQH5 143 aa1.51□□□□□ -2.17
Ush2a-201ENSMUST00000060479 Krtap4-16Q91W93 202 aa1.5□□□□□ -2.17
Ush2a-201ENSMUST00000060479 Gm11596B1AQB0 205 aa1.46□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Hmcn1D3YXG0 5634 aa1.46□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Krtap4-1Q3UUY3 169 aa1.45□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Lce1kJ3QP15 125 aa1.44□□□□□ -2.18
Ush2a-201ENSMUST00000060479 2300003K06RikA2A4M0 262 aa1.43□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Mt3P28184 68 aa1.42□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Gm11564A2A4L9 201 aa1.41□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Gm11563B1AQ90 168 aa1.41□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Gm11595B1AQA7 289 aa1.41□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Krtap4-8B1AQA8 209 aa1.41□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Mt1P02802 61 aaKnown RBP1.41□□□□□ -2.18
Ush2a-201ENSMUST00000060479 Krtap4-9B1AQA9 244 aa1.4□□□□□ -2.19
Ush2a-201ENSMUST00000060479 Sprr2bO70554 98 aa1.4□□□□□ -2.19
Ush2a-201ENSMUST00000060479 ObscnA2AAJ9 8891 aaKnown RBP1.4□□□□□ -2.19
Ush2a-201ENSMUST00000060479 Krtap4-7Q9D732 168 aa1.38□□□□□ -2.19
Ush2a-201ENSMUST00000060479 Muc19Q6PZE0 7524 aa1.36□□□□□ -2.19
Ush2a-201ENSMUST00000060479 AhnakE9Q616 5656 aaKnown RBP1.35□□□□□ -2.19
Ush2a-201ENSMUST00000060479 Krtap4-13Q9D7P3 165 aa1.35□□□□□ -2.19
Ush2a-201ENSMUST00000060479 Krtap6-3A0A087WQL6 57 aa1.32□□□□□ -2.2
Ush2a-201ENSMUST00000060479 Gm11554B1AQB2 190 aa1.24□□□□□ -2.21
Ush2a-201ENSMUST00000060479 Krtap20-2E9Q0A8 60 aa1.24□□□□□ -2.21
Ush2a-201ENSMUST00000060479 Gm11555B1AQ89 175 aa1.23□□□□□ -2.21
Ush2a-201ENSMUST00000060479 Muc16A0A140LJ72 8478 aa1.22□□□□□ -2.21
Ush2a-201ENSMUST00000060479 1110025L11RikO09048 78 aa1.08□□□□□ -2.24
Ush2a-201ENSMUST00000060479 Krtap6-5Q925H3 78 aa1.08□□□□□ -2.24
Ush2a-201ENSMUST00000060479 Gm11568A2A4M2 211 aa1.07□□□□□ -2.24
Ush2a-201ENSMUST00000060479 Krtap9-1Q64526 186 aa1.07□□□□□ -2.24
Ush2a-201ENSMUST00000060479 A0A1Y7VJH8 109 aa1.03□□□□□ -2.24
Ush2a-201ENSMUST00000060479 Gm11559Q9D3H7 191 aa1.01□□□□□ -2.25
Ush2a-201ENSMUST00000060479 Krtap5-2Q9D5Z7 189 aa0.99□□□□□ -2.25
Ush2a-201ENSMUST00000060479 Gm10229O08631 77 aa0.99□□□□□ -2.25
Ush2a-201ENSMUST00000060479 Phgr1Q8K0G7 91 aa0.98□□□□□ -2.25
Ush2a-201ENSMUST00000060479 Gm4553A0A1B0GSA9 284 aa0.92□□□□□ -2.26
Ush2a-201ENSMUST00000060479 Gm10153A0A1B0GRL1 320 aa0.91□□□□□ -2.26
Ush2a-201ENSMUST00000060479 Gm11567Q9D141 195 aa0.89□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Gm2431E9Q8S1 172 aa0.87□□□□□ -2.27
Ush2a-201ENSMUST00000060479 A0A286YCP9 139 aa0.87□□□□□ -2.27
Ush2a-201ENSMUST00000060479 A0A1Y7VLE6 161 aa0.86□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Gm40460A0A1B0GR10 244 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Gm7579A0A1B0GRJ4 243 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Krtap5-5Q2TA51 241 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Krtap5-4Q62220 223 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Gm45337A0A1B0GS71 263 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 A030005L19RikA0A1Y7VIU2 113 aa0.85□□□□□ -2.27
Ush2a-201ENSMUST00000060479 Krtap6-2O08884 159 aa0.84□□□□□ -2.28
Ush2a-201ENSMUST00000060479 Krtap21-1Q925H4 128 aa0.82□□□□□ -2.28
Ush2a-201ENSMUST00000060479 Gm39115A0A1B0GSH7 232 aa0.8□□□□□ -2.28
Ush2a-201ENSMUST00000060479 A0A1Y7VJ07 166 aa0.7□□□□□ -2.3
Ush2a-201ENSMUST00000060479 Gm45618A0A1B0GSA0 219 aa0.69□□□□□ -2.3
Ush2a-201ENSMUST00000060479 Gm29735A0A1B0GT06 219 aa0.69□□□□□ -2.3
Ush2a-201ENSMUST00000060479 Krtap28-13A0A087WQP5 138 aa0.66□□□□□ -2.3
Ush2a-201ENSMUST00000060479 A030003K21RikA0A1Y7VIM3 128 aa0.52□□□□□ -2.33
Ush2a-201ENSMUST00000060479 Gm6217A0A1Y7VJK9 128 aa0.48□□□□□ -2.33
Ush2a-201ENSMUST00000060479 A030014E15RikA0A1Y7VJV2 120 aa0.46□□□□□ -2.34
Ush2a-201ENSMUST00000060479 A030005K14RikA0A1Y7VNY1 122 aa0.46□□□□□ -2.34
Ush2a-201ENSMUST00000060479 Krtap5-1Q64507 230 aa0.44□□□□□ -2.34
Ush2a-201ENSMUST00000060479 Krtap28-10A0A1Y7VP58 119 aa0.41□□□□□ -2.34
Ush2a-201ENSMUST00000060479 Gm7544A0A1Y7VJ58 118 aa0.38□□□□□ -2.35
Ush2a-201ENSMUST00000060479 Gm4559A4IF42 199 aa0.34□□□□□ -2.36
Retrieved 80 of 22,080 RNA–protein pairs in 15.2 ms