RNA–Protein interactions for RNA: ENSMUST00000058626.8

Pdlim5-202, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 5 BASIC

Gene Pdlim5, Length 873 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-202ENSMUST00000058626 Lce3bQ9CQM7 98 aa6.38□□□□□ -1.39
Pdlim5-202ENSMUST00000058626 Lce1kJ3QP15 125 aa6.35□□□□□ -1.39
Pdlim5-202ENSMUST00000058626 Tnp1P10856 55 aa6.35□□□□□ -1.39
Pdlim5-202ENSMUST00000058626 Gm40193A0A1B0GT39 78 aa6.26□□□□□ -1.41
Pdlim5-202ENSMUST00000058626 Syne1Q6ZWR6 8799 aa6.25□□□□□ -1.41
Pdlim5-202ENSMUST00000058626 Gm11559Q9D3H7 191 aa6.18□□□□□ -1.42
Pdlim5-202ENSMUST00000058626 Gm11568A2A4M2 211 aa6.15□□□□□ -1.42
Pdlim5-202ENSMUST00000058626 Krtap9-1Q64526 186 aa6.15□□□□□ -1.42
Pdlim5-202ENSMUST00000058626 Gm4553A0A1B0GSA9 284 aa6.07□□□□□ -1.44
Pdlim5-202ENSMUST00000058626 Lce1fB9EJP6 147 aa6.05□□□□□ -1.44
Pdlim5-202ENSMUST00000058626 Lce1cQ9D1C5 147 aa6.05□□□□□ -1.44
Pdlim5-202ENSMUST00000058626 A030005L19RikA0A1Y7VIU2 113 aa6.03□□□□□ -1.44
Pdlim5-202ENSMUST00000058626 Eppk1Q8R0W0 6548 aa6.01□□□□□ -1.45
Pdlim5-202ENSMUST00000058626 Gm11554B1AQB2 190 aa6□□□□□ -1.45
Pdlim5-202ENSMUST00000058626 Gm11938Q9D3H4 131 aa5.98□□□□□ -1.45
Pdlim5-202ENSMUST00000058626 Macf1Q9QXZ0 7354 aaKnown RBP5.91□□□□□ -1.46
Pdlim5-202ENSMUST00000058626 Kmt2dQ6PDK2 5588 aa5.9□□□□□ -1.47
Pdlim5-202ENSMUST00000058626 SvipQ3UZP4 77 aa5.88□□□□□ -1.47
Pdlim5-202ENSMUST00000058626 Gm45337A0A1B0GS71 263 aa5.85□□□□□ -1.47
Pdlim5-202ENSMUST00000058626 Gm2431E9Q8S1 172 aa5.85□□□□□ -1.47
Pdlim5-202ENSMUST00000058626 Mt1P02802 61 aaKnown RBP5.85□□□□□ -1.47
Pdlim5-202ENSMUST00000058626 Lce3cQ91V05 98 aa5.77□□□□□ -1.49
Pdlim5-202ENSMUST00000058626 Gm10153A0A1B0GRL1 320 aa5.76□□□□□ -1.49
Pdlim5-202ENSMUST00000058626 Krtap19-4Q925H7 84 aa5.76□□□□□ -1.49
Pdlim5-202ENSMUST00000058626 Lce3dE9Q8V1 98 aa5.69□□□□□ -1.5
Pdlim5-202ENSMUST00000058626 Mp68P56379 58 aa5.67□□□□□ -1.5
Pdlim5-202ENSMUST00000058626 Gm40460A0A1B0GR10 244 aa5.65□□□□□ -1.5
Pdlim5-202ENSMUST00000058626 Gm7579A0A1B0GRJ4 243 aa5.65□□□□□ -1.5
Pdlim5-202ENSMUST00000058626 Krtap5-5Q2TA51 241 aa5.65□□□□□ -1.5
Pdlim5-202ENSMUST00000058626 Krtap5-4Q62220 223 aa5.65□□□□□ -1.5
Pdlim5-202ENSMUST00000058626 Hmcn1D3YXG0 5634 aa5.6□□□□□ -1.51
Pdlim5-202ENSMUST00000058626 Gm11639A0A1D5RLM8 5808 aa5.58□□□□□ -1.52
Pdlim5-202ENSMUST00000058626 Lce3eF8VQJ0 98 aa5.54□□□□□ -1.52
Pdlim5-202ENSMUST00000058626 Lce3fQ6PAI4 98 aa5.54□□□□□ -1.52
Pdlim5-202ENSMUST00000058626 Gm39115A0A1B0GSH7 232 aa5.51□□□□□ -1.53
Pdlim5-202ENSMUST00000058626 Sprr2dO70555 85 aa5.46□□□□□ -1.54
Pdlim5-202ENSMUST00000058626 Muc19Q6PZE0 7524 aa5.45□□□□□ -1.54
Pdlim5-202ENSMUST00000058626 Mt3P28184 68 aa5.41□□□□□ -1.54
Pdlim5-202ENSMUST00000058626 4933428G20RikQ9D3X4 101 aa5.41□□□□□ -1.54
Pdlim5-202ENSMUST00000058626 Gpr98Q8VHN7 6298 aaKnown RBP5.38□□□□□ -1.55
Pdlim5-202ENSMUST00000058626 ObscnA2AAJ9 8891 aaKnown RBP5.38□□□□□ -1.55
Pdlim5-202ENSMUST00000058626 Gm20538F6Z9R1 75 aa5.32□□□□□ -1.56
Pdlim5-202ENSMUST00000058626 Lce3aQ497I5 98 aa5.31□□□□□ -1.56
Pdlim5-202ENSMUST00000058626 DstQ91ZU6 7393 aaKnown RBP5.28□□□□□ -1.56
Pdlim5-202ENSMUST00000058626 Krtap28-13A0A087WQP5 138 aa5.15□□□□□ -1.59
Pdlim5-202ENSMUST00000058626 A0A1Y7VLE6 161 aa5.15□□□□□ -1.59
Pdlim5-202ENSMUST00000058626 Sprr2fO70557 76 aa5.14□□□□□ -1.59
Pdlim5-202ENSMUST00000058626 Gm10100J3QK64 120 aa5.13□□□□□ -1.59
Pdlim5-202ENSMUST00000058626 A030005K14RikA0A1Y7VNY1 122 aa5.12□□□□□ -1.59
Pdlim5-202ENSMUST00000058626 Krtap31-2Q8CAY5 177 aa5.1□□□□□ -1.59
Pdlim5-202ENSMUST00000058626 Krtap4-16Q91W93 202 aa5.1□□□□□ -1.59
Pdlim5-202ENSMUST00000058626 Gm45618A0A1B0GSA0 219 aa5.08□□□□□ -1.6
Pdlim5-202ENSMUST00000058626 Krtap28-10A0A1Y7VP58 119 aa5.06□□□□□ -1.6
Pdlim5-202ENSMUST00000058626 NebE9Q1W3 7152 aa5.02□□□□□ -1.61
Pdlim5-202ENSMUST00000058626 AhnakE9Q616 5656 aaKnown RBP4.99□□□□□ -1.61
Pdlim5-202ENSMUST00000058626 Gm10142J3KMP7 120 aa4.86□□□□□ -1.63
Pdlim5-202ENSMUST00000058626 Sprr2eO70556 76 aa4.79□□□□□ -1.64
Pdlim5-202ENSMUST00000058626 A030014E15RikA0A1Y7VJV2 120 aa4.74□□□□□ -1.65
Pdlim5-202ENSMUST00000058626 A0A1Y7VJ07 166 aa4.72□□□□□ -1.65
Pdlim5-202ENSMUST00000058626 Sprr2hO70559 108 aa4.7□□□□□ -1.66
Pdlim5-202ENSMUST00000058626 Gm10024A0A0A0MQA4 119 aa4.67□□□□□ -1.66
Pdlim5-202ENSMUST00000058626 Krtap31-1Q9D644 177 aa4.66□□□□□ -1.66
Pdlim5-202ENSMUST00000058626 Gm7544A0A1Y7VJ58 118 aa4.55□□□□□ -1.68
Pdlim5-202ENSMUST00000058626 Ndufaf8A2AMZ4 74 aa4.45□□□□□ -1.7
Pdlim5-202ENSMUST00000058626 1110025L11RikO09048 78 aa4.26□□□□□ -1.73
Pdlim5-202ENSMUST00000058626 Krtap6-5Q925H3 78 aa4.26□□□□□ -1.73
Pdlim5-202ENSMUST00000058626 Gm29735A0A1B0GT06 219 aa4.18□□□□□ -1.74
Pdlim5-202ENSMUST00000058626 A030003K21RikA0A1Y7VIM3 128 aa4.1□□□□□ -1.75
Pdlim5-202ENSMUST00000058626 Muc16A0A140LJ72 8478 aa4.08□□□□□ -1.76
Pdlim5-202ENSMUST00000058626 Gm11567Q9D141 195 aa3.94□□□□□ -1.78
Pdlim5-202ENSMUST00000058626 Gm6217A0A1Y7VJK9 128 aa3.87□□□□□ -1.79
Pdlim5-202ENSMUST00000058626 A0A286YCP9 139 aa3.84□□□□□ -1.79
Pdlim5-202ENSMUST00000058626 Gm10229O08631 77 aa3.81□□□□□ -1.8
Pdlim5-202ENSMUST00000058626 Gm9112A2AI92 75 aa3.45□□□□□ -1.86
Pdlim5-202ENSMUST00000058626 Krtap21-1Q925H4 128 aa3.43□□□□□ -1.86
Pdlim5-202ENSMUST00000058626 Sprr2bO70554 98 aa3.41□□□□□ -1.86
Pdlim5-202ENSMUST00000058626 Krtap6-2O08884 159 aa3.37□□□□□ -1.87
Pdlim5-202ENSMUST00000058626 Krtap5-1Q64507 230 aa3.08□□□□□ -1.92
Pdlim5-202ENSMUST00000058626 Phgr1Q8K0G7 91 aa2.83□□□□□ -1.96
Pdlim5-202ENSMUST00000058626 Gm4559A4IF42 199 aa2.41□□□□□ -2.02
Retrieved 80 of 22,080 RNA–protein pairs in 169.4 ms