RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Krtap31-1Q9D644 177 aa5.54□□□□□ -1.52
Ebf3-201ENSMUST00000033378 Ush2AQ2QI47 5193 aa5.54□□□□□ -1.52
Ebf3-201ENSMUST00000033378 Mt4P47945 62 aa5.53□□□□□ -1.52
Ebf3-201ENSMUST00000033378 Sprr2hO70559 108 aa5.49□□□□□ -1.53
Ebf3-201ENSMUST00000033378 Sprr2fO70557 76 aa5.48□□□□□ -1.53
Ebf3-201ENSMUST00000033378 Krtap4-6Q3V4B7 195 aa5.48□□□□□ -1.53
Ebf3-201ENSMUST00000033378 Gm11562A0PK51 136 aa5.44□□□□□ -1.54
Ebf3-201ENSMUST00000033378 Fsip2A2ARZ3 6995 aa5.27□□□□□ -1.57
Ebf3-201ENSMUST00000033378 Krtap4-2B1AQ85 167 aa5.26□□□□□ -1.57
Ebf3-201ENSMUST00000033378 Muc5bE9Q5I3 4800 aa5.25□□□□□ -1.57
Ebf3-201ENSMUST00000033378 Krtap4-1Q3UUY3 169 aa5.24□□□□□ -1.57
Ebf3-201ENSMUST00000033378 Krtap4-16Q91W93 202 aa5.22□□□□□ -1.57
Ebf3-201ENSMUST00000033378 2300003K06RikA2A4M0 262 aa5.13□□□□□ -1.59
Ebf3-201ENSMUST00000033378 Krtap4-9B1AQA9 244 aa5.12□□□□□ -1.59
Ebf3-201ENSMUST00000033378 Lce1kJ3QP15 125 aa5.12□□□□□ -1.59
Ebf3-201ENSMUST00000033378 Gm11564A2A4L9 201 aa5.09□□□□□ -1.59
Ebf3-201ENSMUST00000033378 Gm11563B1AQ90 168 aa5.09□□□□□ -1.59
Ebf3-201ENSMUST00000033378 Gm11595B1AQA7 289 aa5.09□□□□□ -1.59
Ebf3-201ENSMUST00000033378 Krtap4-8B1AQA8 209 aa5.09□□□□□ -1.59
Ebf3-201ENSMUST00000033378 Lce1a1Q9CQH5 143 aa5.09□□□□□ -1.59
Ebf3-201ENSMUST00000033378 SspoQ8CG65 4998 aa5.06□□□□□ -1.6
Ebf3-201ENSMUST00000033378 Gm11596B1AQB0 205 aa5.03□□□□□ -1.6
Ebf3-201ENSMUST00000033378 Krtap4-7Q9D732 168 aa5.02□□□□□ -1.61
Ebf3-201ENSMUST00000033378 Syne2Q6ZWQ0 6874 aaKnown RBP5□□□□□ -1.61
Ebf3-201ENSMUST00000033378 Krtap4-13Q9D7P3 165 aa4.98□□□□□ -1.61
Ebf3-201ENSMUST00000033378 ObscnA2AAJ9 8891 aaKnown RBP4.94□□□□□ -1.62
Ebf3-201ENSMUST00000033378 Mt3P28184 68 aa4.86□□□□□ -1.63
Ebf3-201ENSMUST00000033378 Mt1P02802 61 aaKnown RBP4.72□□□□□ -1.65
Ebf3-201ENSMUST00000033378 Macf1Q9QXZ0 7354 aaKnown RBP4.67□□□□□ -1.66
Ebf3-201ENSMUST00000033378 A0A1Y7VLE6 161 aa4.54□□□□□ -1.68
Ebf3-201ENSMUST00000033378 Gm11555B1AQ89 175 aa4.49□□□□□ -1.69
Ebf3-201ENSMUST00000033378 A030005K14RikA0A1Y7VNY1 122 aa4.49□□□□□ -1.69
Ebf3-201ENSMUST00000033378 Krtap20-2E9Q0A8 60 aa4.46□□□□□ -1.7
Ebf3-201ENSMUST00000033378 A0A1Y7VJH8 109 aa4.43□□□□□ -1.7
Ebf3-201ENSMUST00000033378 Gm11554B1AQB2 190 aa4.42□□□□□ -1.7
Ebf3-201ENSMUST00000033378 A0A1Y7VJ07 166 aa4.38□□□□□ -1.71
Ebf3-201ENSMUST00000033378 Krtap28-13A0A087WQP5 138 aa4.36□□□□□ -1.71
Ebf3-201ENSMUST00000033378 Krtap6-3A0A087WQL6 57 aa4.33□□□□□ -1.72
Ebf3-201ENSMUST00000033378 A030003K21RikA0A1Y7VIM3 128 aa4.3□□□□□ -1.72
Ebf3-201ENSMUST00000033378 Muc19Q6PZE0 7524 aa4.27□□□□□ -1.73
Ebf3-201ENSMUST00000033378 Krtap28-10A0A1Y7VP58 119 aa4.25□□□□□ -1.73
Ebf3-201ENSMUST00000033378 DstQ91ZU6 7393 aaKnown RBP4.24□□□□□ -1.73
Ebf3-201ENSMUST00000033378 Sprr2bO70554 98 aa4.17□□□□□ -1.74
Ebf3-201ENSMUST00000033378 Kmt2dQ6PDK2 5588 aa4.16□□□□□ -1.74
Ebf3-201ENSMUST00000033378 Gm7544A0A1Y7VJ58 118 aa4.15□□□□□ -1.74
Ebf3-201ENSMUST00000033378 Gm6217A0A1Y7VJK9 128 aa4.12□□□□□ -1.75
Ebf3-201ENSMUST00000033378 NebE9Q1W3 7152 aa4.11□□□□□ -1.75
Ebf3-201ENSMUST00000033378 A030014E15RikA0A1Y7VJV2 120 aa4.08□□□□□ -1.76
Ebf3-201ENSMUST00000033378 Krtap31-2Q8CAY5 177 aa4□□□□□ -1.77
Ebf3-201ENSMUST00000033378 1110025L11RikO09048 78 aa3.88□□□□□ -1.79
Ebf3-201ENSMUST00000033378 Krtap6-5Q925H3 78 aa3.88□□□□□ -1.79
Ebf3-201ENSMUST00000033378 Eppk1Q8R0W0 6548 aa3.8□□□□□ -1.8
Ebf3-201ENSMUST00000033378 Gm11568A2A4M2 211 aa3.74□□□□□ -1.81
Ebf3-201ENSMUST00000033378 Krtap9-1Q64526 186 aa3.74□□□□□ -1.81
Ebf3-201ENSMUST00000033378 A030005L19RikA0A1Y7VIU2 113 aa3.74□□□□□ -1.81
Ebf3-201ENSMUST00000033378 Gm10229O08631 77 aa3.6□□□□□ -1.83
Ebf3-201ENSMUST00000033378 A0A286YCP9 139 aa3.56□□□□□ -1.84
Ebf3-201ENSMUST00000033378 Phgr1Q8K0G7 91 aa3.5□□□□□ -1.85
Ebf3-201ENSMUST00000033378 Gm11559Q9D3H7 191 aa3.48□□□□□ -1.85
Ebf3-201ENSMUST00000033378 Hmcn1D3YXG0 5634 aa3.39□□□□□ -1.87
Ebf3-201ENSMUST00000033378 Gm11639A0A1D5RLM8 5808 aa3.38□□□□□ -1.87
Ebf3-201ENSMUST00000033378 Gpr98Q8VHN7 6298 aaKnown RBP3.33□□□□□ -1.88
Ebf3-201ENSMUST00000033378 Krtap5-2Q9D5Z7 189 aa3.29□□□□□ -1.88
Ebf3-201ENSMUST00000033378 Gm4553A0A1B0GSA9 284 aa3.03□□□□□ -1.92
Ebf3-201ENSMUST00000033378 Gm10153A0A1B0GRL1 320 aa2.96□□□□□ -1.94
Ebf3-201ENSMUST00000033378 Krtap6-2O08884 159 aa2.92□□□□□ -1.94
Ebf3-201ENSMUST00000033378 AhnakE9Q616 5656 aaKnown RBP2.9□□□□□ -1.94
Ebf3-201ENSMUST00000033378 Gm2431E9Q8S1 172 aa2.89□□□□□ -1.95
Ebf3-201ENSMUST00000033378 Krtap21-1Q925H4 128 aa2.84□□□□□ -1.95
Ebf3-201ENSMUST00000033378 Gm45337A0A1B0GS71 263 aa2.79□□□□□ -1.96
Ebf3-201ENSMUST00000033378 Gm40460A0A1B0GR10 244 aa2.75□□□□□ -1.97
Ebf3-201ENSMUST00000033378 Gm7579A0A1B0GRJ4 243 aa2.75□□□□□ -1.97
Ebf3-201ENSMUST00000033378 Krtap5-5Q2TA51 241 aa2.75□□□□□ -1.97
Ebf3-201ENSMUST00000033378 Krtap5-4Q62220 223 aa2.75□□□□□ -1.97
Ebf3-201ENSMUST00000033378 Gm11567Q9D141 195 aa2.63□□□□□ -1.99
Ebf3-201ENSMUST00000033378 Gm39115A0A1B0GSH7 232 aa2.58□□□□□ -2
Ebf3-201ENSMUST00000033378 Gm45618A0A1B0GSA0 219 aa2.3□□□□□ -2.04
Ebf3-201ENSMUST00000033378 Gm29735A0A1B0GT06 219 aa2.22□□□□□ -2.05
Ebf3-201ENSMUST00000033378 Krtap5-1Q64507 230 aa1.78□□□□□ -2.12
Ebf3-201ENSMUST00000033378 Gm4559A4IF42 199 aa1.68□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 6.4 ms