RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 ZanO88799 5376 aa2.83□□□□□ -1.96
Ubr1-201ENSMUST00000028728 Krtap17-1A2A5X6 109 aa2.79□□□□□ -1.96
Ubr1-201ENSMUST00000028728 Krtap4-16Q91W93 202 aa2.77□□□□□ -1.97
Ubr1-201ENSMUST00000028728 A0A1Y7VLE6 161 aa2.77□□□□□ -1.97
Ubr1-201ENSMUST00000028728 Mt4P47945 62 aa2.74□□□□□ -1.97
Ubr1-201ENSMUST00000028728 Rnf213E9Q555 5152 aaKnown RBP2.71□□□□□ -1.97
Ubr1-201ENSMUST00000028728 Mt1P02802 61 aaKnown RBP2.7□□□□□ -1.98
Ubr1-201ENSMUST00000028728 Krtap4-2B1AQ85 167 aa2.7□□□□□ -1.98
Ubr1-201ENSMUST00000028728 Muc5bE9Q5I3 4800 aa2.69□□□□□ -1.98
Ubr1-201ENSMUST00000028728 Mt3P28184 68 aa2.67□□□□□ -1.98
Ubr1-201ENSMUST00000028728 Krtap4-6Q3V4B7 195 aa2.66□□□□□ -1.98
Ubr1-201ENSMUST00000028728 Krtap31-2Q8CAY5 177 aa2.64□□□□□ -1.99
Ubr1-201ENSMUST00000028728 Lce1a1Q9CQH5 143 aa2.63□□□□□ -1.99
Ubr1-201ENSMUST00000028728 Krtap4-1Q3UUY3 169 aa2.63□□□□□ -1.99
Ubr1-201ENSMUST00000028728 Lce1kJ3QP15 125 aa2.61□□□□□ -1.99
Ubr1-201ENSMUST00000028728 ObscnA2AAJ9 8891 aaKnown RBP2.58□□□□□ -2
Ubr1-201ENSMUST00000028728 Muc16A0A140LJ72 8478 aa2.58□□□□□ -2
Ubr1-201ENSMUST00000028728 A030003K21RikA0A1Y7VIM3 128 aa2.56□□□□□ -2
Ubr1-201ENSMUST00000028728 2300003K06RikA2A4M0 262 aa2.56□□□□□ -2
Ubr1-201ENSMUST00000028728 Ush2AQ2QI47 5193 aa2.55□□□□□ -2
Ubr1-201ENSMUST00000028728 A0A1Y7VJ07 166 aa2.54□□□□□ -2
Ubr1-201ENSMUST00000028728 SspoQ8CG65 4998 aa2.54□□□□□ -2
Ubr1-201ENSMUST00000028728 Sprr2bO70554 98 aa2.54□□□□□ -2
Ubr1-201ENSMUST00000028728 Krtap4-7Q9D732 168 aa2.52□□□□□ -2.01
Ubr1-201ENSMUST00000028728 Gm11564A2A4L9 201 aa2.5□□□□□ -2.01
Ubr1-201ENSMUST00000028728 Gm11563B1AQ90 168 aa2.5□□□□□ -2.01
Ubr1-201ENSMUST00000028728 Gm11595B1AQA7 289 aa2.5□□□□□ -2.01
Ubr1-201ENSMUST00000028728 Krtap4-8B1AQA8 209 aa2.5□□□□□ -2.01
Ubr1-201ENSMUST00000028728 Krtap4-9B1AQA9 244 aa2.5□□□□□ -2.01
Ubr1-201ENSMUST00000028728 Krtap28-13A0A087WQP5 138 aa2.49□□□□□ -2.01
Ubr1-201ENSMUST00000028728 Krtap28-10A0A1Y7VP58 119 aa2.47□□□□□ -2.01
Ubr1-201ENSMUST00000028728 Gm11596B1AQB0 205 aa2.45□□□□□ -2.02
Ubr1-201ENSMUST00000028728 A030005K14RikA0A1Y7VNY1 122 aa2.44□□□□□ -2.02
Ubr1-201ENSMUST00000028728 A030014E15RikA0A1Y7VJV2 120 aa2.42□□□□□ -2.02
Ubr1-201ENSMUST00000028728 Krtap4-13Q9D7P3 165 aa2.41□□□□□ -2.02
Ubr1-201ENSMUST00000028728 Gm6217A0A1Y7VJK9 128 aa2.4□□□□□ -2.03
Ubr1-201ENSMUST00000028728 Fsip2A2ARZ3 6995 aa2.38□□□□□ -2.03
Ubr1-201ENSMUST00000028728 Gm11555B1AQ89 175 aa2.38□□□□□ -2.03
Ubr1-201ENSMUST00000028728 Syne2Q6ZWQ0 6874 aaKnown RBP2.36□□□□□ -2.03
Ubr1-201ENSMUST00000028728 Gm7544A0A1Y7VJ58 118 aa2.34□□□□□ -2.04
Ubr1-201ENSMUST00000028728 A0A1Y7VJH8 109 aa2.33□□□□□ -2.04
Ubr1-201ENSMUST00000028728 A030005L19RikA0A1Y7VIU2 113 aa2.26□□□□□ -2.05
Ubr1-201ENSMUST00000028728 Krtap6-3A0A087WQL6 57 aa2.23□□□□□ -2.05
Ubr1-201ENSMUST00000028728 Krtap20-2E9Q0A8 60 aa2.2□□□□□ -2.06
Ubr1-201ENSMUST00000028728 Kmt2dQ6PDK2 5588 aa2.15□□□□□ -2.06
Ubr1-201ENSMUST00000028728 Gm11554B1AQB2 190 aa2.14□□□□□ -2.07
Ubr1-201ENSMUST00000028728 1110025L11RikO09048 78 aa2.14□□□□□ -2.07
Ubr1-201ENSMUST00000028728 Krtap6-5Q925H3 78 aa2.14□□□□□ -2.07
Ubr1-201ENSMUST00000028728 Macf1Q9QXZ0 7354 aaKnown RBP2.04□□□□□ -2.08
Ubr1-201ENSMUST00000028728 DstQ91ZU6 7393 aaKnown RBP2.02□□□□□ -2.09
Ubr1-201ENSMUST00000028728 Eppk1Q8R0W0 6548 aa1.99□□□□□ -2.09
Ubr1-201ENSMUST00000028728 Gm10229O08631 77 aa1.99□□□□□ -2.09
Ubr1-201ENSMUST00000028728 A0A286YCP9 139 aa1.95□□□□□ -2.1
Ubr1-201ENSMUST00000028728 Phgr1Q8K0G7 91 aa1.93□□□□□ -2.1
Ubr1-201ENSMUST00000028728 NebE9Q1W3 7152 aa1.87□□□□□ -2.11
Ubr1-201ENSMUST00000028728 Gm11568A2A4M2 211 aa1.86□□□□□ -2.11
Ubr1-201ENSMUST00000028728 Krtap9-1Q64526 186 aa1.86□□□□□ -2.11
Ubr1-201ENSMUST00000028728 Muc19Q6PZE0 7524 aa1.86□□□□□ -2.11
Ubr1-201ENSMUST00000028728 Gm11639A0A1D5RLM8 5808 aa1.82□□□□□ -2.12
Ubr1-201ENSMUST00000028728 Gm11559Q9D3H7 191 aa1.76□□□□□ -2.13
Ubr1-201ENSMUST00000028728 Krtap5-2Q9D5Z7 189 aa1.7□□□□□ -2.14
Ubr1-201ENSMUST00000028728 Hmcn1D3YXG0 5634 aa1.67□□□□□ -2.14
Ubr1-201ENSMUST00000028728 Gpr98Q8VHN7 6298 aaKnown RBP1.64□□□□□ -2.15
Ubr1-201ENSMUST00000028728 Krtap6-2O08884 159 aa1.58□□□□□ -2.16
Ubr1-201ENSMUST00000028728 Gm4553A0A1B0GSA9 284 aa1.57□□□□□ -2.16
Ubr1-201ENSMUST00000028728 Krtap21-1Q925H4 128 aa1.55□□□□□ -2.16
Ubr1-201ENSMUST00000028728 Gm11567Q9D141 195 aa1.52□□□□□ -2.17
Ubr1-201ENSMUST00000028728 Gm10153A0A1B0GRL1 320 aa1.51□□□□□ -2.17
Ubr1-201ENSMUST00000028728 AhnakE9Q616 5656 aaKnown RBP1.49□□□□□ -2.17
Ubr1-201ENSMUST00000028728 Gm40460A0A1B0GR10 244 aa1.42□□□□□ -2.18
Ubr1-201ENSMUST00000028728 Gm7579A0A1B0GRJ4 243 aa1.42□□□□□ -2.18
Ubr1-201ENSMUST00000028728 Gm2431E9Q8S1 172 aa1.42□□□□□ -2.18
Ubr1-201ENSMUST00000028728 Krtap5-5Q2TA51 241 aa1.42□□□□□ -2.18
Ubr1-201ENSMUST00000028728 Krtap5-4Q62220 223 aa1.42□□□□□ -2.18
Ubr1-201ENSMUST00000028728 Gm45337A0A1B0GS71 263 aa1.41□□□□□ -2.18
Ubr1-201ENSMUST00000028728 Gm39115A0A1B0GSH7 232 aa1.24□□□□□ -2.21
Ubr1-201ENSMUST00000028728 Gm29735A0A1B0GT06 219 aa1.1□□□□□ -2.23
Ubr1-201ENSMUST00000028728 Gm45618A0A1B0GSA0 219 aa1.08□□□□□ -2.24
Ubr1-201ENSMUST00000028728 Krtap5-1Q64507 230 aa0.97□□□□□ -2.25
Ubr1-201ENSMUST00000028728 Gm4559A4IF42 199 aa0.81□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 71.9 ms