RNA–Protein interactions for RNA: ENSMUST00000028386.11

Nckap1-201, Transcript of Nck-associated protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nckap1, Length 4,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-201ENSMUST00000028386 Krtap4-1Q3UUY3 169 aa6.86□□□□□ -1.31
Nckap1-201ENSMUST00000028386 Muc5bE9Q5I3 4800 aa6.83□□□□□ -1.32
Nckap1-201ENSMUST00000028386 Krtap4-9B1AQA9 244 aa6.71□□□□□ -1.33
Nckap1-201ENSMUST00000028386 Gm11596B1AQB0 205 aa6.71□□□□□ -1.34
Nckap1-201ENSMUST00000028386 Gm11564A2A4L9 201 aa6.68□□□□□ -1.34
Nckap1-201ENSMUST00000028386 Gm11563B1AQ90 168 aa6.68□□□□□ -1.34
Nckap1-201ENSMUST00000028386 Gm11595B1AQA7 289 aa6.68□□□□□ -1.34
Nckap1-201ENSMUST00000028386 Krtap4-8B1AQA8 209 aa6.68□□□□□ -1.34
Nckap1-201ENSMUST00000028386 Sprr2eO70556 76 aa6.63□□□□□ -1.35
Nckap1-201ENSMUST00000028386 Krtap19-4Q925H7 84 aa6.63□□□□□ -1.35
Nckap1-201ENSMUST00000028386 Macf1Q9QXZ0 7354 aaKnown RBP6.59□□□□□ -1.35
Nckap1-201ENSMUST00000028386 Syne2Q6ZWQ0 6874 aaKnown RBP6.58□□□□□ -1.36
Nckap1-201ENSMUST00000028386 2300003K06RikA2A4M0 262 aa6.58□□□□□ -1.36
Nckap1-201ENSMUST00000028386 SspoQ8CG65 4998 aa6.57□□□□□ -1.36
Nckap1-201ENSMUST00000028386 Krtap4-13Q9D7P3 165 aa6.54□□□□□ -1.36
Nckap1-201ENSMUST00000028386 Gm10024A0A0A0MQA4 119 aa6.54□□□□□ -1.36
Nckap1-201ENSMUST00000028386 Krtap4-7Q9D732 168 aa6.48□□□□□ -1.37
Nckap1-201ENSMUST00000028386 Sprr2fO70557 76 aa6.38□□□□□ -1.39
Nckap1-201ENSMUST00000028386 ObscnA2AAJ9 8891 aaKnown RBP6.38□□□□□ -1.39
Nckap1-201ENSMUST00000028386 Lce1kJ3QP15 125 aa6.33□□□□□ -1.4
Nckap1-201ENSMUST00000028386 Gm11562A0PK51 136 aa6.23□□□□□ -1.41
Nckap1-201ENSMUST00000028386 Gm11938Q9D3H4 131 aa6.21□□□□□ -1.41
Nckap1-201ENSMUST00000028386 Sprr2dO70555 85 aa6.21□□□□□ -1.42
Nckap1-201ENSMUST00000028386 Krtap31-1Q9D644 177 aa5.99□□□□□ -1.45
Nckap1-201ENSMUST00000028386 Sprr2hO70559 108 aa5.92□□□□□ -1.46
Nckap1-201ENSMUST00000028386 DstQ91ZU6 7393 aaKnown RBP5.91□□□□□ -1.46
Nckap1-201ENSMUST00000028386 Lce1a1Q9CQH5 143 aa5.91□□□□□ -1.46
Nckap1-201ENSMUST00000028386 Gm11554B1AQB2 190 aa5.79□□□□□ -1.48
Nckap1-201ENSMUST00000028386 Mt3P28184 68 aa5.76□□□□□ -1.49
Nckap1-201ENSMUST00000028386 Muc19Q6PZE0 7524 aa5.75□□□□□ -1.49
Nckap1-201ENSMUST00000028386 Krtap6-3A0A087WQL6 57 aa5.74□□□□□ -1.49
Nckap1-201ENSMUST00000028386 Krtap20-2E9Q0A8 60 aa5.74□□□□□ -1.49
Nckap1-201ENSMUST00000028386 NebE9Q1W3 7152 aa5.72□□□□□ -1.49
Nckap1-201ENSMUST00000028386 Krtap4-16Q91W93 202 aa5.71□□□□□ -1.5
Nckap1-201ENSMUST00000028386 Mt1P02802 61 aaKnown RBP5.53□□□□□ -1.52
Nckap1-201ENSMUST00000028386 Gm11555B1AQ89 175 aa5.53□□□□□ -1.52
Nckap1-201ENSMUST00000028386 Kmt2dQ6PDK2 5588 aa5.39□□□□□ -1.55
Nckap1-201ENSMUST00000028386 Eppk1Q8R0W0 6548 aa4.95□□□□□ -1.62
Nckap1-201ENSMUST00000028386 Sprr2bO70554 98 aa4.94□□□□□ -1.62
Nckap1-201ENSMUST00000028386 Gpr98Q8VHN7 6298 aaKnown RBP4.78□□□□□ -1.64
Nckap1-201ENSMUST00000028386 Gm11568A2A4M2 211 aa4.73□□□□□ -1.65
Nckap1-201ENSMUST00000028386 Krtap9-1Q64526 186 aa4.73□□□□□ -1.65
Nckap1-201ENSMUST00000028386 Gm11639A0A1D5RLM8 5808 aa4.68□□□□□ -1.66
Nckap1-201ENSMUST00000028386 Gm11559Q9D3H7 191 aa4.58□□□□□ -1.68
Nckap1-201ENSMUST00000028386 Hmcn1D3YXG0 5634 aa4.51□□□□□ -1.69
Nckap1-201ENSMUST00000028386 1110025L11RikO09048 78 aa4.5□□□□□ -1.69
Nckap1-201ENSMUST00000028386 Krtap6-5Q925H3 78 aa4.5□□□□□ -1.69
Nckap1-201ENSMUST00000028386 Krtap31-2Q8CAY5 177 aa4.46□□□□□ -1.7
Nckap1-201ENSMUST00000028386 Krtap5-2Q9D5Z7 189 aa4.24□□□□□ -1.73
Nckap1-201ENSMUST00000028386 Gm10229O08631 77 aa4.18□□□□□ -1.74
Nckap1-201ENSMUST00000028386 Gm4553A0A1B0GSA9 284 aa3.98□□□□□ -1.77
Nckap1-201ENSMUST00000028386 Phgr1Q8K0G7 91 aa3.85□□□□□ -1.79
Nckap1-201ENSMUST00000028386 Gm2431E9Q8S1 172 aa3.84□□□□□ -1.79
Nckap1-201ENSMUST00000028386 AhnakE9Q616 5656 aaKnown RBP3.82□□□□□ -1.8
Nckap1-201ENSMUST00000028386 Gm10153A0A1B0GRL1 320 aa3.73□□□□□ -1.81
Nckap1-201ENSMUST00000028386 A0A1Y7VJH8 109 aa3.59□□□□□ -1.83
Nckap1-201ENSMUST00000028386 A030005L19RikA0A1Y7VIU2 113 aa3.56□□□□□ -1.84
Nckap1-201ENSMUST00000028386 Gm45337A0A1B0GS71 263 aa3.52□□□□□ -1.85
Nckap1-201ENSMUST00000028386 Krtap6-2O08884 159 aa3.47□□□□□ -1.85
Nckap1-201ENSMUST00000028386 Gm40460A0A1B0GR10 244 aa3.42□□□□□ -1.86
Nckap1-201ENSMUST00000028386 Gm7579A0A1B0GRJ4 243 aa3.42□□□□□ -1.86
Nckap1-201ENSMUST00000028386 Krtap5-5Q2TA51 241 aa3.42□□□□□ -1.86
Nckap1-201ENSMUST00000028386 Krtap5-4Q62220 223 aa3.42□□□□□ -1.86
Nckap1-201ENSMUST00000028386 Krtap21-1Q925H4 128 aa3.29□□□□□ -1.88
Nckap1-201ENSMUST00000028386 Gm39115A0A1B0GSH7 232 aa3.17□□□□□ -1.9
Nckap1-201ENSMUST00000028386 A0A1Y7VLE6 161 aa3.17□□□□□ -1.9
Nckap1-201ENSMUST00000028386 Gm11567Q9D141 195 aa3.09□□□□□ -1.92
Nckap1-201ENSMUST00000028386 A030003K21RikA0A1Y7VIM3 128 aa2.92□□□□□ -1.94
Nckap1-201ENSMUST00000028386 Krtap28-10A0A1Y7VP58 119 aa2.78□□□□□ -1.97
Nckap1-201ENSMUST00000028386 Gm6217A0A1Y7VJK9 128 aa2.74□□□□□ -1.97
Nckap1-201ENSMUST00000028386 A030005K14RikA0A1Y7VNY1 122 aa2.7□□□□□ -1.98
Nckap1-201ENSMUST00000028386 Krtap28-13A0A087WQP5 138 aa2.69□□□□□ -1.98
Nckap1-201ENSMUST00000028386 Gm45618A0A1B0GSA0 219 aa2.68□□□□□ -1.98
Nckap1-201ENSMUST00000028386 A0A1Y7VJ07 166 aa2.61□□□□□ -1.99
Nckap1-201ENSMUST00000028386 Gm7544A0A1Y7VJ58 118 aa2.58□□□□□ -2
Nckap1-201ENSMUST00000028386 Gm29735A0A1B0GT06 219 aa2.54□□□□□ -2
Nckap1-201ENSMUST00000028386 A030014E15RikA0A1Y7VJV2 120 aa2.5□□□□□ -2.01
Nckap1-201ENSMUST00000028386 A0A286YCP9 139 aa2.23□□□□□ -2.05
Nckap1-201ENSMUST00000028386 Krtap5-1Q64507 230 aa2.04□□□□□ -2.08
Nckap1-201ENSMUST00000028386 Gm4559A4IF42 199 aa1.36□□□□□ -2.19
Retrieved 80 of 22,080 RNA–protein pairs in 9.5 ms