RNA–Protein interactions for RNA: ENSMUST00000021056.7

Scn4a-201, Transcript of Sodium channel protein type 4 subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn4a, Length 6,598 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4a-201ENSMUST00000021056 Ubr4A2AN08 5180 aa3.16□□□□□ -1.9
Scn4a-201ENSMUST00000021056 Krtap17-1A2A5X6 109 aa3.14□□□□□ -1.91
Scn4a-201ENSMUST00000021056 ZanO88799 5376 aa3.13□□□□□ -1.91
Scn4a-201ENSMUST00000021056 Gm11596B1AQB0 205 aa3.07□□□□□ -1.92
Scn4a-201ENSMUST00000021056 SspoQ8CG65 4998 aa3.06□□□□□ -1.92
Scn4a-201ENSMUST00000021056 Krtap4-1Q3UUY3 169 aa3.03□□□□□ -1.92
Scn4a-201ENSMUST00000021056 2300003K06RikA2A4M0 262 aa3□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Krtap4-7Q9D732 168 aa3□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Gm11564A2A4L9 201 aa2.99□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Gm11563B1AQ90 168 aa2.99□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Gm11595B1AQA7 289 aa2.99□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Krtap4-8B1AQA8 209 aa2.99□□□□□ -1.93
Scn4a-201ENSMUST00000021056 Krtap4-9B1AQA9 244 aa2.95□□□□□ -1.94
Scn4a-201ENSMUST00000021056 Muc5bE9Q5I3 4800 aa2.91□□□□□ -1.94
Scn4a-201ENSMUST00000021056 Krtap4-13Q9D7P3 165 aa2.9□□□□□ -1.95
Scn4a-201ENSMUST00000021056 Sprr2bO70554 98 aa2.87□□□□□ -1.95
Scn4a-201ENSMUST00000021056 Lce1kJ3QP15 125 aa2.85□□□□□ -1.95
Scn4a-201ENSMUST00000021056 Lce1a1Q9CQH5 143 aa2.83□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Lce1a2Q9D1K4 149 aa2.83□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Krtap4-16Q91W93 202 aa2.8□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Gm11562A0PK51 136 aa2.8□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Mt3P28184 68 aa2.79□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Gm11938Q9D3H4 131 aa2.78□□□□□ -1.96
Scn4a-201ENSMUST00000021056 Krtap6-3A0A087WQL6 57 aa2.76□□□□□ -1.97
Scn4a-201ENSMUST00000021056 Mdn1A2ANY6 5589 aaKnown RBP2.74□□□□□ -1.97
Scn4a-201ENSMUST00000021056 Syne1Q6ZWR6 8799 aa2.71□□□□□ -1.98
Scn4a-201ENSMUST00000021056 Gm11554B1AQB2 190 aa2.69□□□□□ -1.98
Scn4a-201ENSMUST00000021056 Fsip2A2ARZ3 6995 aa2.66□□□□□ -1.98
Scn4a-201ENSMUST00000021056 Syne2Q6ZWQ0 6874 aaKnown RBP2.65□□□□□ -1.98
Scn4a-201ENSMUST00000021056 Gm11555B1AQ89 175 aa2.52□□□□□ -2.01
Scn4a-201ENSMUST00000021056 Eppk1Q8R0W0 6548 aa2.42□□□□□ -2.02
Scn4a-201ENSMUST00000021056 Krtap20-2E9Q0A8 60 aa2.4□□□□□ -2.03
Scn4a-201ENSMUST00000021056 Mt1P02802 61 aaKnown RBP2.31□□□□□ -2.04
Scn4a-201ENSMUST00000021056 ObscnA2AAJ9 8891 aaKnown RBP2.28□□□□□ -2.04
Scn4a-201ENSMUST00000021056 Muc16A0A140LJ72 8478 aa2.27□□□□□ -2.05
Scn4a-201ENSMUST00000021056 Krtap5-2Q9D5Z7 189 aa2.13□□□□□ -2.07
Scn4a-201ENSMUST00000021056 Kmt2dQ6PDK2 5588 aa2.11□□□□□ -2.07
Scn4a-201ENSMUST00000021056 A0A1Y7VJH8 109 aa2.05□□□□□ -2.08
Scn4a-201ENSMUST00000021056 Gm4553A0A1B0GSA9 284 aa2.01□□□□□ -2.09
Scn4a-201ENSMUST00000021056 DstQ91ZU6 7393 aaKnown RBP2□□□□□ -2.09
Scn4a-201ENSMUST00000021056 NebE9Q1W3 7152 aa1.99□□□□□ -2.09
Scn4a-201ENSMUST00000021056 Gm11568A2A4M2 211 aa1.97□□□□□ -2.09
Scn4a-201ENSMUST00000021056 Krtap9-1Q64526 186 aa1.97□□□□□ -2.09
Scn4a-201ENSMUST00000021056 Gm40460A0A1B0GR10 244 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm7579A0A1B0GRJ4 243 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Krtap5-5Q2TA51 241 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Krtap5-4Q62220 223 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm45337A0A1B0GS71 263 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm11639A0A1D5RLM8 5808 aa1.96□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm10153A0A1B0GRL1 320 aa1.94□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Macf1Q9QXZ0 7354 aaKnown RBP1.94□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm11559Q9D3H7 191 aa1.93□□□□□ -2.1
Scn4a-201ENSMUST00000021056 1110025L11RikO09048 78 aa1.92□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Krtap6-5Q925H3 78 aa1.92□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gpr98Q8VHN7 6298 aaKnown RBP1.92□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Hmcn1D3YXG0 5634 aa1.91□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Phgr1Q8K0G7 91 aa1.91□□□□□ -2.1
Scn4a-201ENSMUST00000021056 Gm10229O08631 77 aa1.91□□□□□ -2.1
Scn4a-201ENSMUST00000021056 A030005L19RikA0A1Y7VIU2 113 aa1.9□□□□□ -2.11
Scn4a-201ENSMUST00000021056 AhnakE9Q616 5656 aaKnown RBP1.84□□□□□ -2.12
Scn4a-201ENSMUST00000021056 Gm2431E9Q8S1 172 aa1.82□□□□□ -2.12
Scn4a-201ENSMUST00000021056 Gm11567Q9D141 195 aa1.81□□□□□ -2.12
Scn4a-201ENSMUST00000021056 Gm39115A0A1B0GSH7 232 aa1.79□□□□□ -2.12
Scn4a-201ENSMUST00000021056 A0A1Y7VLE6 161 aa1.71□□□□□ -2.14
Scn4a-201ENSMUST00000021056 Gm45618A0A1B0GSA0 219 aa1.63□□□□□ -2.15
Scn4a-201ENSMUST00000021056 Muc19Q6PZE0 7524 aa1.63□□□□□ -2.15
Scn4a-201ENSMUST00000021056 Gm29735A0A1B0GT06 219 aa1.5□□□□□ -2.17
Scn4a-201ENSMUST00000021056 Krtap6-2O08884 159 aa1.5□□□□□ -2.17
Scn4a-201ENSMUST00000021056 Krtap21-1Q925H4 128 aa1.36□□□□□ -2.19
Scn4a-201ENSMUST00000021056 A0A1Y7VJ07 166 aa1.34□□□□□ -2.19
Scn4a-201ENSMUST00000021056 A0A286YCP9 139 aa1.06□□□□□ -2.24
Scn4a-201ENSMUST00000021056 A030005K14RikA0A1Y7VNY1 122 aa0.94□□□□□ -2.26
Scn4a-201ENSMUST00000021056 A030014E15RikA0A1Y7VJV2 120 aa0.9□□□□□ -2.26
Scn4a-201ENSMUST00000021056 Gm7544A0A1Y7VJ58 118 aa0.89□□□□□ -2.27
Scn4a-201ENSMUST00000021056 Krtap28-10A0A1Y7VP58 119 aa0.89□□□□□ -2.27
Scn4a-201ENSMUST00000021056 Krtap5-1Q64507 230 aa0.87□□□□□ -2.27
Scn4a-201ENSMUST00000021056 Krtap28-13A0A087WQP5 138 aa0.84□□□□□ -2.28
Scn4a-201ENSMUST00000021056 Gm4559A4IF42 199 aa0.81□□□□□ -2.28
Scn4a-201ENSMUST00000021056 A030003K21RikA0A1Y7VIM3 128 aa0.77□□□□□ -2.29
Scn4a-201ENSMUST00000021056 Gm6217A0A1Y7VJK9 128 aa0.76□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 125.4 ms