RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Lce1dQ9D731 133 aa4.13□□□□□ -1.75
Ctr9-201ENSMUST00000005749 Gm11564A2A4L9 201 aa4.13□□□□□ -1.75
Ctr9-201ENSMUST00000005749 Gm11563B1AQ90 168 aa4.13□□□□□ -1.75
Ctr9-201ENSMUST00000005749 Gm11595B1AQA7 289 aa4.13□□□□□ -1.75
Ctr9-201ENSMUST00000005749 Krtap4-8B1AQA8 209 aa4.13□□□□□ -1.75
Ctr9-201ENSMUST00000005749 SspoQ8CG65 4998 aa4.12□□□□□ -1.75
Ctr9-201ENSMUST00000005749 Krtap9-3Q3V2C1 136 aa4.12□□□□□ -1.75
Ctr9-201ENSMUST00000005749 Lce3dE9Q8V1 98 aa4.1□□□□□ -1.75
Ctr9-201ENSMUST00000005749 Krtap4-13Q9D7P3 165 aa4.04□□□□□ -1.76
Ctr9-201ENSMUST00000005749 Lce3aQ497I5 98 aa4.04□□□□□ -1.76
Ctr9-201ENSMUST00000005749 Gm10142J3KMP7 120 aa4.03□□□□□ -1.76
Ctr9-201ENSMUST00000005749 2300003K06RikA2A4M0 262 aa4.02□□□□□ -1.77
Ctr9-201ENSMUST00000005749 Lce1eQ9D139 143 aa3.99□□□□□ -1.77
Ctr9-201ENSMUST00000005749 Krtap4-7Q9D732 168 aa3.95□□□□□ -1.78
Ctr9-201ENSMUST00000005749 ObscnA2AAJ9 8891 aaKnown RBP3.87□□□□□ -1.79
Ctr9-201ENSMUST00000005749 Krtap19-4Q925H7 84 aa3.84□□□□□ -1.79
Ctr9-201ENSMUST00000005749 Sprr2eO70556 76 aa3.82□□□□□ -1.8
Ctr9-201ENSMUST00000005749 Lce1kJ3QP15 125 aa3.79□□□□□ -1.8
Ctr9-201ENSMUST00000005749 Sprr2fO70557 76 aa3.76□□□□□ -1.81
Ctr9-201ENSMUST00000005749 DstQ91ZU6 7393 aaKnown RBP3.76□□□□□ -1.81
Ctr9-201ENSMUST00000005749 NebE9Q1W3 7152 aa3.67□□□□□ -1.82
Ctr9-201ENSMUST00000005749 Gm10024A0A0A0MQA4 119 aa3.66□□□□□ -1.82
Ctr9-201ENSMUST00000005749 Muc19Q6PZE0 7524 aa3.65□□□□□ -1.82
Ctr9-201ENSMUST00000005749 Lce1a1Q9CQH5 143 aa3.65□□□□□ -1.82
Ctr9-201ENSMUST00000005749 Gm11562A0PK51 136 aa3.63□□□□□ -1.83
Ctr9-201ENSMUST00000005749 Gm11554B1AQB2 190 aa3.57□□□□□ -1.84
Ctr9-201ENSMUST00000005749 Krtap6-3A0A087WQL6 57 aa3.53□□□□□ -1.84
Ctr9-201ENSMUST00000005749 Krtap20-2E9Q0A8 60 aa3.51□□□□□ -1.85
Ctr9-201ENSMUST00000005749 Gm11555B1AQ89 175 aa3.5□□□□□ -1.85
Ctr9-201ENSMUST00000005749 Gm11938Q9D3H4 131 aa3.48□□□□□ -1.85
Ctr9-201ENSMUST00000005749 Sprr2dO70555 85 aa3.43□□□□□ -1.86
Ctr9-201ENSMUST00000005749 Mt3P28184 68 aa3.34□□□□□ -1.88
Ctr9-201ENSMUST00000005749 Krtap31-1Q9D644 177 aa3.29□□□□□ -1.88
Ctr9-201ENSMUST00000005749 Kmt2dQ6PDK2 5588 aa3.27□□□□□ -1.89
Ctr9-201ENSMUST00000005749 Mt1P02802 61 aaKnown RBP3.24□□□□□ -1.89
Ctr9-201ENSMUST00000005749 Sprr2hO70559 108 aa3.23□□□□□ -1.89
Ctr9-201ENSMUST00000005749 Krtap4-16Q91W93 202 aa3.19□□□□□ -1.9
Ctr9-201ENSMUST00000005749 Eppk1Q8R0W0 6548 aa3.06□□□□□ -1.92
Ctr9-201ENSMUST00000005749 Gpr98Q8VHN7 6298 aaKnown RBP3.05□□□□□ -1.92
Ctr9-201ENSMUST00000005749 Gm11639A0A1D5RLM8 5808 aa3.04□□□□□ -1.92
Ctr9-201ENSMUST00000005749 Krtap31-2Q8CAY5 177 aa2.91□□□□□ -1.94
Ctr9-201ENSMUST00000005749 Sprr2bO70554 98 aa2.9□□□□□ -1.95
Ctr9-201ENSMUST00000005749 Gm11568A2A4M2 211 aa2.89□□□□□ -1.95
Ctr9-201ENSMUST00000005749 Krtap9-1Q64526 186 aa2.89□□□□□ -1.95
Ctr9-201ENSMUST00000005749 Hmcn1D3YXG0 5634 aa2.87□□□□□ -1.95
Ctr9-201ENSMUST00000005749 Gm11559Q9D3H7 191 aa2.83□□□□□ -1.96
Ctr9-201ENSMUST00000005749 A0A1Y7VJH8 109 aa2.66□□□□□ -1.98
Ctr9-201ENSMUST00000005749 Krtap5-2Q9D5Z7 189 aa2.61□□□□□ -1.99
Ctr9-201ENSMUST00000005749 1110025L11RikO09048 78 aa2.58□□□□□ -2
Ctr9-201ENSMUST00000005749 Krtap6-5Q925H3 78 aa2.58□□□□□ -2
Ctr9-201ENSMUST00000005749 Krtap28-10A0A1Y7VP58 119 aa2.49□□□□□ -2.01
Ctr9-201ENSMUST00000005749 Gm4553A0A1B0GSA9 284 aa2.46□□□□□ -2.02
Ctr9-201ENSMUST00000005749 A0A1Y7VLE6 161 aa2.46□□□□□ -2.02
Ctr9-201ENSMUST00000005749 A030005K14RikA0A1Y7VNY1 122 aa2.45□□□□□ -2.02
Ctr9-201ENSMUST00000005749 Krtap28-13A0A087WQP5 138 aa2.44□□□□□ -2.02
Ctr9-201ENSMUST00000005749 Gm2431E9Q8S1 172 aa2.4□□□□□ -2.02
Ctr9-201ENSMUST00000005749 Gm10229O08631 77 aa2.4□□□□□ -2.02
Ctr9-201ENSMUST00000005749 AhnakE9Q616 5656 aaKnown RBP2.4□□□□□ -2.03
Ctr9-201ENSMUST00000005749 Gm10153A0A1B0GRL1 320 aa2.28□□□□□ -2.04
Ctr9-201ENSMUST00000005749 Gm7544A0A1Y7VJ58 118 aa2.27□□□□□ -2.05
Ctr9-201ENSMUST00000005749 A030005L19RikA0A1Y7VIU2 113 aa2.27□□□□□ -2.05
Ctr9-201ENSMUST00000005749 A0A1Y7VJ07 166 aa2.23□□□□□ -2.05
Ctr9-201ENSMUST00000005749 A030003K21RikA0A1Y7VIM3 128 aa2.21□□□□□ -2.06
Ctr9-201ENSMUST00000005749 Gm45337A0A1B0GS71 263 aa2.17□□□□□ -2.06
Ctr9-201ENSMUST00000005749 Phgr1Q8K0G7 91 aa2.14□□□□□ -2.07
Ctr9-201ENSMUST00000005749 Gm6217A0A1Y7VJK9 128 aa2.11□□□□□ -2.07
Ctr9-201ENSMUST00000005749 Gm40460A0A1B0GR10 244 aa2.09□□□□□ -2.07
Ctr9-201ENSMUST00000005749 Gm7579A0A1B0GRJ4 243 aa2.09□□□□□ -2.07
Ctr9-201ENSMUST00000005749 Krtap5-5Q2TA51 241 aa2.09□□□□□ -2.07
Ctr9-201ENSMUST00000005749 Krtap5-4Q62220 223 aa2.09□□□□□ -2.07
Ctr9-201ENSMUST00000005749 A030014E15RikA0A1Y7VJV2 120 aa2.07□□□□□ -2.08
Ctr9-201ENSMUST00000005749 Krtap6-2O08884 159 aa2.02□□□□□ -2.09
Ctr9-201ENSMUST00000005749 Gm39115A0A1B0GSH7 232 aa1.98□□□□□ -2.09
Ctr9-201ENSMUST00000005749 Krtap21-1Q925H4 128 aa1.9□□□□□ -2.11
Ctr9-201ENSMUST00000005749 Gm11567Q9D141 195 aa1.88□□□□□ -2.11
Ctr9-201ENSMUST00000005749 A0A286YCP9 139 aa1.8□□□□□ -2.12
Ctr9-201ENSMUST00000005749 Gm45618A0A1B0GSA0 219 aa1.71□□□□□ -2.14
Ctr9-201ENSMUST00000005749 Gm29735A0A1B0GT06 219 aa1.54□□□□□ -2.16
Ctr9-201ENSMUST00000005749 Krtap5-1Q64507 230 aa1.32□□□□□ -2.2
Ctr9-201ENSMUST00000005749 Gm4559A4IF42 199 aa0.97□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 46.7 ms