RNA–Protein interactions for RNA: ENSMUST00000001809.14

Pabpc1-201, Transcript of Polyadenylate-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pabpc1, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc1-201ENSMUST00000001809 Lce1bQ9D149 137 aa4.38□□□□□ -1.71
Pabpc1-201ENSMUST00000001809 Gm7735D3YX18 52 aa4.37□□□□□ -1.71
Pabpc1-201ENSMUST00000001809 Lce1hQ9D6R3 140 aa4.36□□□□□ -1.71
Pabpc1-201ENSMUST00000001809 Gm2431E9Q8S1 172 aa4.33□□□□□ -1.72
Pabpc1-201ENSMUST00000001809 SspoQ8CG65 4998 aa4.32□□□□□ -1.72
Pabpc1-201ENSMUST00000001809 Lce1kJ3QP15 125 aa4.32□□□□□ -1.72
Pabpc1-201ENSMUST00000001809 Gm11567Q9D141 195 aa4.32□□□□□ -1.72
Pabpc1-201ENSMUST00000001809 Mt2P02798 61 aa4.24□□□□□ -1.73
Pabpc1-201ENSMUST00000001809 Gm6358A0A087WPH4 74 aa4.18□□□□□ -1.74
Pabpc1-201ENSMUST00000001809 Hmcn1D3YXG0 5634 aa4.17□□□□□ -1.74
Pabpc1-201ENSMUST00000001809 Gm10061D3Z714 54 aa4.13□□□□□ -1.75
Pabpc1-201ENSMUST00000001809 Muc5bE9Q5I3 4800 aa4.13□□□□□ -1.75
Pabpc1-201ENSMUST00000001809 4933428G20RikQ9D3X4 101 aa4.05□□□□□ -1.76
Pabpc1-201ENSMUST00000001809 Gm11564A2A4L9 201 aa4.05□□□□□ -1.76
Pabpc1-201ENSMUST00000001809 Gm11595B1AQA7 289 aa4.04□□□□□ -1.76
Pabpc1-201ENSMUST00000001809 Gm10272F7CZ33 110 aa4.03□□□□□ -1.76
Pabpc1-201ENSMUST00000001809 Sprr2gO70558 76 aa4.01□□□□□ -1.77
Pabpc1-201ENSMUST00000001809 Lce1eQ9D139 143 aa4□□□□□ -1.77
Pabpc1-201ENSMUST00000001809 Mdn1A2ANY6 5589 aaKnown RBP3.98□□□□□ -1.77
Pabpc1-201ENSMUST00000001809 Krtap22-2J3QNX6 67 aa3.97□□□□□ -1.77
Pabpc1-201ENSMUST00000001809 Gm11938Q9D3H4 131 aa3.95□□□□□ -1.78
Pabpc1-201ENSMUST00000001809 Krtap4-13Q9D7P3 165 aa3.94□□□□□ -1.78
Pabpc1-201ENSMUST00000001809 Sprr2dO70555 85 aa3.89□□□□□ -1.79
Pabpc1-201ENSMUST00000001809 Gm45337A0A1B0GS71 263 aa3.86□□□□□ -1.79
Pabpc1-201ENSMUST00000001809 Gm10153A0A1B0GRL1 320 aa3.79□□□□□ -1.8
Pabpc1-201ENSMUST00000001809 Gm10100J3QK64 120 aa3.77□□□□□ -1.81
Pabpc1-201ENSMUST00000001809 Gm11639A0A1D5RLM8 5808 aa3.76□□□□□ -1.81
Pabpc1-201ENSMUST00000001809 Krtap5-4Q62220 223 aa3.75□□□□□ -1.81
Pabpc1-201ENSMUST00000001809 Gm11559Q9D3H7 191 aa3.75□□□□□ -1.81
Pabpc1-201ENSMUST00000001809 Lce3bQ9CQM7 98 aa3.75□□□□□ -1.81
Pabpc1-201ENSMUST00000001809 Syne1Q6ZWR6 8799 aa3.69□□□□□ -1.82
Pabpc1-201ENSMUST00000001809 Gm10142J3KMP7 120 aa3.68□□□□□ -1.82
Pabpc1-201ENSMUST00000001809 Krtap19-4Q925H7 84 aa3.66□□□□□ -1.82
Pabpc1-201ENSMUST00000001809 Krtap6-3A0A087WQL6 57 aa3.63□□□□□ -1.83
Pabpc1-201ENSMUST00000001809 Lce3cQ91V05 98 aa3.6□□□□□ -1.83
Pabpc1-201ENSMUST00000001809 Krtap4-8B1AQA8 209 aa3.57□□□□□ -1.84
Pabpc1-201ENSMUST00000001809 Lce3dE9Q8V1 98 aa3.57□□□□□ -1.84
Pabpc1-201ENSMUST00000001809 Krtap4-6Q3V4B7 195 aa3.53□□□□□ -1.84
Pabpc1-201ENSMUST00000001809 Syne2Q6ZWQ0 6874 aaKnown RBP3.53□□□□□ -1.84
Pabpc1-201ENSMUST00000001809 Gm11596B1AQB0 205 aa3.52□□□□□ -1.85
Pabpc1-201ENSMUST00000001809 Lce3eF8VQJ0 98 aa3.52□□□□□ -1.85
Pabpc1-201ENSMUST00000001809 Lce3fQ6PAI4 98 aa3.52□□□□□ -1.85
Pabpc1-201ENSMUST00000001809 2300003K06RikA2A4M0 262 aa3.49□□□□□ -1.85
Pabpc1-201ENSMUST00000001809 Fsip2A2ARZ3 6995 aa3.48□□□□□ -1.85
Pabpc1-201ENSMUST00000001809 Sprr2iO70560 76 aa3.46□□□□□ -1.86
Pabpc1-201ENSMUST00000001809 Sprr2hO70559 108 aa3.45□□□□□ -1.86
Pabpc1-201ENSMUST00000001809 Krtap20-2E9Q0A8 60 aa3.43□□□□□ -1.86
Pabpc1-201ENSMUST00000001809 ObscnA2AAJ9 8891 aaKnown RBP3.42□□□□□ -1.86
Pabpc1-201ENSMUST00000001809 Lce3aQ497I5 98 aa3.42□□□□□ -1.86
Pabpc1-201ENSMUST00000001809 Mt4P47945 62 aa3.38□□□□□ -1.87
Pabpc1-201ENSMUST00000001809 Gm4553A0A1B0GSA9 284 aa3.35□□□□□ -1.87
Pabpc1-201ENSMUST00000001809 Sprr2eO70556 76 aa3.35□□□□□ -1.87
Pabpc1-201ENSMUST00000001809 Krtap9-1Q64526 186 aa3.34□□□□□ -1.88
Pabpc1-201ENSMUST00000001809 Krtap5-1Q64507 230 aa3.33□□□□□ -1.88
Pabpc1-201ENSMUST00000001809 Gm11568A2A4M2 211 aa3.32□□□□□ -1.88
Pabpc1-201ENSMUST00000001809 Sprr2fO70557 76 aa3.32□□□□□ -1.88
Pabpc1-201ENSMUST00000001809 Sprr2kO70562 68 aa3.26□□□□□ -1.89
Pabpc1-201ENSMUST00000001809 Gm10024A0A0A0MQA4 119 aa3.25□□□□□ -1.89
Pabpc1-201ENSMUST00000001809 Gm4559A4IF42 199 aa3.25□□□□□ -1.89
Pabpc1-201ENSMUST00000001809 Krtap4-16Q91W93 202 aa3.23□□□□□ -1.89
Pabpc1-201ENSMUST00000001809 Mt1P02802 61 aaKnown RBP3.17□□□□□ -1.9
Pabpc1-201ENSMUST00000001809 Muc16A0A140LJ72 8478 aa3.09□□□□□ -1.91
Pabpc1-201ENSMUST00000001809 Krtap5-2Q9D5Z7 189 aa3.06□□□□□ -1.92
Pabpc1-201ENSMUST00000001809 Macf1Q9QXZ0 7354 aaKnown RBP2.97□□□□□ -1.93
Pabpc1-201ENSMUST00000001809 Kmt2dQ6PDK2 5588 aa2.94□□□□□ -1.94
Pabpc1-201ENSMUST00000001809 Krtap5-5Q2TA51 241 aa2.93□□□□□ -1.94
Pabpc1-201ENSMUST00000001809 Gm7579A0A1B0GRJ4 243 aa2.82□□□□□ -1.96
Pabpc1-201ENSMUST00000001809 Mt3P28184 68 aa2.81□□□□□ -1.96
Pabpc1-201ENSMUST00000001809 DstQ91ZU6 7393 aaKnown RBP2.67□□□□□ -1.98
Pabpc1-201ENSMUST00000001809 Muc19Q6PZE0 7524 aa2.63□□□□□ -1.99
Pabpc1-201ENSMUST00000001809 Gm40460A0A1B0GR10 244 aa2.63□□□□□ -1.99
Pabpc1-201ENSMUST00000001809 AhnakE9Q616 5656 aaKnown RBP2.61□□□□□ -1.99
Pabpc1-201ENSMUST00000001809 1110025L11RikO09048 78 aa2.46□□□□□ -2.01
Pabpc1-201ENSMUST00000001809 Krtap6-5Q925H3 78 aa2.46□□□□□ -2.01
Pabpc1-201ENSMUST00000001809 NebE9Q1W3 7152 aa2.36□□□□□ -2.03
Pabpc1-201ENSMUST00000001809 Sprr2bO70554 98 aa2.26□□□□□ -2.05
Pabpc1-201ENSMUST00000001809 Gm10229O08631 77 aa2.18□□□□□ -2.06
Pabpc1-201ENSMUST00000001809 Phgr1Q8K0G7 91 aa2.05□□□□□ -2.08
Pabpc1-201ENSMUST00000001809 Krtap21-1Q925H4 128 aa2.01□□□□□ -2.09
Pabpc1-201ENSMUST00000001809 Krtap6-2O08884 159 aa1.81□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 70.7 ms