RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 C11orf49Q9H6J7 331 aa12.3□□□□□ -0.44
PHGDH-222ENST00000641587 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
PHGDH-222ENST00000641587 AATFQ9NY61 560 aaKnown RBP eCLIP12.3□□□□□ -0.44
PHGDH-222ENST00000641587 MORF4L1Q9UBU8 362 aa12.3□□□□□ -0.44
PHGDH-222ENST00000641587 PNMA6EA0A0J9YXQ4 647 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 GDF11O95390 407 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 LDHCP07864 332 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 BMP8BP34820 402 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-222ENST00000641587 GSTO1P78417 241 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 PABPC4Q13310 644 aaKnown RBP eCLIP12.29□□□□□ -0.44
PHGDH-222ENST00000641587 MTX1Q13505 466 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 PDE3AQ14432 1141 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 CCL14Q16627 93 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 GORABQ5T7V8 394 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 MAP3K21Q5TCX8 1036 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 POTEEQ6S8J3 1075 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 ADGRA1Q86SQ6 560 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 MAPKAPK5Q8IW41 473 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 ITPRIPQ8IWB1 547 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 CRBNQ96SW2 442 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 PORCNQ9H237 461 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 OGDHLQ9ULD0 1010 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 FRMPD3Q5JV73 1810 aa12.29□□□□□ -0.44
PHGDH-222ENST00000641587 RLBP1P12271 317 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 CAPN2P17655 700 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 BACE1P56817 501 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 HERVK_113P62684 666 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 Q3C1V9 767 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 DEFB123Q8N688 67 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 TGFBRAP1Q8WUH2 860 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 TBC1D2Q9BYX2 928 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 AS3MTQ9HBK9 375 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 LRP2BPQ9P2M1 347 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 HERC5Q9UII4 1024 aaKnown RBP12.28□□□□□ -0.44
PHGDH-222ENST00000641587 COG6Q9Y2V7 657 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 GTF3C3Q9Y5Q9 886 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 FLT1P17948 1338 aa12.28□□□□□ -0.44
PHGDH-222ENST00000641587 GNAI3P08754 354 aa12.27□□□□□ -0.45
PHGDH-222ENST00000641587 CCND3P30281 292 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-222ENST00000641587 CACNB2Q08289 660 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-222ENST00000641587 TMEM57Q8N5G2 664 aa12.27□□□□□ -0.45
PHGDH-222ENST00000641587 NUDT12Q9BQG2 462 aa12.27□□□□□ -0.45
PHGDH-222ENST00000641587 PAGR1Q9BTK6 254 aa12.27□□□□□ -0.45
PHGDH-222ENST00000641587 WDR18Q9BV38 432 aa12.27□□□□□ -0.45
PHGDH-222ENST00000641587 TMOD4Q9NZQ9 345 aa12.27□□□□□ -0.45
PHGDH-222ENST00000641587 PI4KBQ9UBF8 816 aa12.27□□□□□ -0.45
PHGDH-222ENST00000641587 RBPJLQ9UBG7 517 aa12.27□□□□□ -0.45
PHGDH-222ENST00000641587 SAP30BPQ9UHR5 308 aaKnown RBP12.27□□□□□ -0.45
PHGDH-222ENST00000641587 PALD1Q9ULE6 856 aa12.27□□□□□ -0.45
PHGDH-222ENST00000641587 HDAC5Q9UQL6 1122 aa12.27□□□□□ -0.45
PHGDH-222ENST00000641587 MAP4K4O95819 1239 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-222ENST00000641587 ASNSP08243 561 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 ZKSCAN1P17029 563 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-222ENST00000641587 HOXA7P31268 230 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-222ENST00000641587 ERVK-9P63128 1117 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 ERVK-24P63145 666 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 ZYXQ15942 572 aaKnown RBP12.26□□□□□ -0.45
PHGDH-222ENST00000641587 LRRC26Q2I0M4 334 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 NAA16Q6N069 864 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-222ENST00000641587 TDHQ8IZJ6 230 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 GPRC5AQ8NFJ5 357 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 SOCS4Q8WXH5 440 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 USP6NLQ92738 828 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 DBNDD2Q9BQY9 259 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 ZBTB21Q9ULJ3 1066 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 NDUFB9Q9Y6M9 179 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 VCANP13611 3396 aa12.26□□□□□ -0.45
PHGDH-222ENST00000641587 CYP2E1P05181 493 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-222ENST00000641587 COL6A1P12109 1028 aa12.25□□□□□ -0.45
PHGDH-222ENST00000641587 DYNLL1P63167 89 aaKnown RBP12.25□□□□□ -0.45
PHGDH-222ENST00000641587 MDM2Q00987 491 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-222ENST00000641587 G3BP1Q13283 466 aaKnown RBP eCLIP12.25□□□□□ -0.458e-8■■■■□ 22.6
PHGDH-222ENST00000641587 LRIT3Q3SXY7 679 aa12.25□□□□□ -0.45
PHGDH-222ENST00000641587 LHX8Q68G74 356 aa12.25□□□□□ -0.45
PHGDH-222ENST00000641587 GPR142Q7Z601 462 aa12.25□□□□□ -0.45
PHGDH-222ENST00000641587 METTL16Q86W50 562 aaKnown RBP12.25□□□□□ -0.45
PHGDH-222ENST00000641587 CRACR2BQ8N4Y2 399 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-222ENST00000641587 EXOC6Q8TAG9 804 aa12.25□□□□□ -0.45
PHGDH-222ENST00000641587 NOL10Q9BSC4 688 aaKnown RBP12.25□□□□□ -0.45
PHGDH-222ENST00000641587 UBE2OQ9C0C9 1292 aaKnown RBP12.25□□□□□ -0.45
PHGDH-222ENST00000641587 DHX36Q9H2U1 1008 aaKnown RBP12.25□□□□□ -0.45
PHGDH-222ENST00000641587 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
PHGDH-222ENST00000641587 MTMR10Q9NXD2 777 aa12.25□□□□□ -0.45
PHGDH-222ENST00000641587 MYH1P12882 1939 aa12.25□□□□□ -0.45
PHGDH-222ENST00000641587 USP17L10C9JJH3 530 aa12.24□□□□□ -0.45
PHGDH-222ENST00000641587 CNMDO75829 334 aa12.24□□□□□ -0.45
PHGDH-222ENST00000641587 BAG3O95817 575 aa12.24□□□□□ -0.45
PHGDH-222ENST00000641587 GNAI2P04899 355 aa12.24□□□□□ -0.45
PHGDH-222ENST00000641587 UQCRFS1P1P0C7P4 283 aa12.24□□□□□ -0.45
PHGDH-222ENST00000641587 XRCC5P13010 732 aaKnown RBP12.24□□□□□ -0.45
PHGDH-222ENST00000641587 ZAP70P43403 619 aa12.24□□□□□ -0.45
PHGDH-222ENST00000641587 TTC39AQ5SRH9 613 aa12.24□□□□□ -0.45
PHGDH-222ENST00000641587 MORN1Q5T089 497 aa12.24□□□□□ -0.45
PHGDH-222ENST00000641587 PIH1D3Q9NQM4 214 aaKnown RBP12.24□□□□□ -0.45
PHGDH-222ENST00000641587 FLRT1Q9NZU1 646 aa12.24□□□□□ -0.45
PHGDH-222ENST00000641587 DDX19BQ9UMR2 479 aa12.24□□□□□ -0.45
PHGDH-222ENST00000641587 CDH23Q9H251 3354 aa12.24□□□□□ -0.45
PHGDH-222ENST00000641587 C19orf81C9J6K1 198 aa12.23□□□□□ -0.45
PHGDH-222ENST00000641587 GH2P01242 217 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms