RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 GDF11O95390 407 aa15.77■□□□□ 0.12
MDC1-209ENST00000613547 PTPRAP18433 802 aa15.77■□□□□ 0.12
MDC1-209ENST00000613547 SHMT1P34896 483 aa15.77■□□□□ 0.12
MDC1-209ENST00000613547 EVX2Q03828 476 aa15.77■□□□□ 0.12
MDC1-209ENST00000613547 SREBF2Q12772 1141 aa15.77■□□□□ 0.12
MDC1-209ENST00000613547 MKRN3Q13064 507 aaKnown RBP15.77■□□□□ 0.12
MDC1-209ENST00000613547 SLC44A5Q8NCS7 719 aa15.77■□□□□ 0.12
MDC1-209ENST00000613547 AS3MTQ9HBK9 375 aa15.77■□□□□ 0.12
MDC1-209ENST00000613547 ZBTB21Q9ULJ3 1066 aa15.77■□□□□ 0.12
MDC1-209ENST00000613547 ZHX2Q9Y6X8 837 aa15.77■□□□□ 0.12
MDC1-209ENST00000613547 MYH1P12882 1939 aa15.76■□□□□ 0.11
MDC1-209ENST00000613547 MANSC4A6NHS7 340 aaPredicted RBP15.76■□□□□ 0.11
MDC1-209ENST00000613547 USP17L5A8MUK1 530 aa15.76■□□□□ 0.11
MDC1-209ENST00000613547 ZNF213O14771 459 aa15.76■□□□□ 0.11
MDC1-209ENST00000613547 AOC2O75106 756 aa15.76■□□□□ 0.11
MDC1-209ENST00000613547 GH2P01242 217 aa15.76■□□□□ 0.11
MDC1-209ENST00000613547 GTF2A2P52657 109 aa15.76■□□□□ 0.11
MDC1-209ENST00000613547 INHBEP58166 350 aa15.76■□□□□ 0.11
MDC1-209ENST00000613547 KIF23Q02241 960 aaPredicted RBP15.76■□□□□ 0.11
MDC1-209ENST00000613547 SNAPC2Q13487 334 aa15.76■□□□□ 0.11
MDC1-209ENST00000613547 IMMTQ16891 758 aaKnown RBP15.76■□□□□ 0.11
MDC1-209ENST00000613547 ZNF444Q8N0Y2 327 aaPredicted RBP15.76■□□□□ 0.11
MDC1-209ENST00000613547 IL25Q9H293 177 aa15.76■□□□□ 0.11
MDC1-209ENST00000613547 ANAPC4Q9UJX5 808 aa15.76■□□□□ 0.11
MDC1-209ENST00000613547 U3KPZ7 1027 aaPredicted RBP15.76■□□□□ 0.11
MDC1-209ENST00000613547 MAP2K1Q02750 393 aaPredicted RBP15.75■□□□□ 0.11
MDC1-209ENST00000613547 RRP1BQ14684 758 aaKnown RBP15.75■□□□□ 0.11
MDC1-209ENST00000613547 TMEM179Q6ZVK1 233 aa15.75■□□□□ 0.11
MDC1-209ENST00000613547 STK11IPQ8N1F8 1099 aa15.75■□□□□ 0.11
MDC1-209ENST00000613547 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
MDC1-209ENST00000613547 RNF41Q9H4P4 317 aaPredicted RBP15.75■□□□□ 0.11
MDC1-209ENST00000613547 SIPA1L1O43166 1804 aa15.74■□□□□ 0.11
MDC1-209ENST00000613547 CXCL11O14625 94 aa15.74■□□□□ 0.11
MDC1-209ENST00000613547 IRF6O14896 467 aa15.74■□□□□ 0.11
MDC1-209ENST00000613547 PCP11498 1178 aaKnown RBP15.74■□□□□ 0.11
MDC1-209ENST00000613547 CETPP11597 493 aa15.74■□□□□ 0.11
MDC1-209ENST00000613547 CTDSPL2Q05D32 466 aa15.74■□□□□ 0.11
MDC1-209ENST00000613547 RAB3GAP1Q15042 981 aa15.74■□□□□ 0.11
MDC1-209ENST00000613547 BEGAINQ9BUH8 593 aa15.74■□□□□ 0.11
MDC1-209ENST00000613547 ANO2Q9NQ90 1003 aa15.74■□□□□ 0.11
MDC1-209ENST00000613547 TOMM22Q9NS69 142 aa15.74■□□□□ 0.11
MDC1-209ENST00000613547 OTOFQ9HC10 1997 aa15.74■□□□□ 0.11
MDC1-209ENST00000613547 SMIM22K7EJ46 135 aa15.73■□□□□ 0.11
MDC1-209ENST00000613547 RASA1P20936 1047 aa15.73■□□□□ 0.11
MDC1-209ENST00000613547 GJA5P36382 358 aa15.73■□□□□ 0.11
MDC1-209ENST00000613547 HAND2P61296 217 aa15.73■□□□□ 0.11
MDC1-209ENST00000613547 OTUD7BQ6GQQ9 843 aa15.73■□□□□ 0.11
MDC1-209ENST00000613547 JMYQ8N9B5 988 aa15.73■□□□□ 0.11
MDC1-209ENST00000613547 ZNF280CQ8ND82 737 aa15.73■□□□□ 0.11
MDC1-209ENST00000613547 KCNH4Q9UQ05 1017 aa15.73■□□□□ 0.11
MDC1-209ENST00000613547 CCL15-CCL14A0A0B4J2E2 113 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 TRIM75PA6NK02 468 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 PRDM1O75626 825 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 TSPY3P0CV98 308 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 TSPY8P0CW00 308 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 AKR1B1P15121 316 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 NT5C2P49902 561 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 JAG1P78504 1218 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 PTH1RQ03431 593 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 SPP2Q13103 211 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 CCL15Q16663 113 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 AKNAD1Q5T1N1 836 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 MFSD6Q6ZSS7 791 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 MAP4K1Q92918 833 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 FEZ1Q99689 392 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 WDR18Q9BV38 432 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 AFG3L2Q9Y4W6 797 aa15.72■□□□□ 0.11
MDC1-209ENST00000613547 BAZ2AQ9UIF9 1905 aaKnown RBP15.72■□□□□ 0.11
MDC1-209ENST00000613547 ORC4O43929 436 aa15.71■□□□□ 0.11
MDC1-209ENST00000613547 EIF5BO60841 1220 aaKnown RBP15.71■□□□□ 0.11
MDC1-209ENST00000613547 REC8O95072 547 aa15.71■□□□□ 0.11
MDC1-209ENST00000613547 ALDH1A1P00352 501 aa15.71■□□□□ 0.11
MDC1-209ENST00000613547 TM4SF4P48230 202 aa15.71■□□□□ 0.11
MDC1-209ENST00000613547 SEPT2Q15019 361 aa15.71■□□□□ 0.11
MDC1-209ENST00000613547 PPP4R3BQ5MIZ7 849 aa15.71■□□□□ 0.11
MDC1-209ENST00000613547 FASTKD5Q7L8L6 764 aaKnown RBP15.71■□□□□ 0.11
MDC1-209ENST00000613547 CCDC84Q86UT8 332 aaPredicted RBP15.71■□□□□ 0.11
MDC1-209ENST00000613547 STAG1Q8WVM7 1258 aa15.71■□□□□ 0.11
MDC1-209ENST00000613547 ZIC5Q96T25 663 aa15.71■□□□□ 0.11
MDC1-209ENST00000613547 SH2D4AQ9H788 454 aa15.71■□□□□ 0.11
MDC1-209ENST00000613547 KANSL2Q9H9L4 492 aa15.71■□□□□ 0.11
MDC1-209ENST00000613547 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.71■□□□□ 0.11
MDC1-209ENST00000613547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.71■□□□□ 0.11
MDC1-209ENST00000613547 DOCK1Q14185 1865 aa15.71■□□□□ 0.11
MDC1-209ENST00000613547 THSD7BQ9C0I4 1608 aa15.7■□□□□ 0.1
MDC1-209ENST00000613547 TESPA1A2RU30 521 aaPredicted RBP15.7■□□□□ 0.1
MDC1-209ENST00000613547 TSPY2A6NKD2 308 aa15.7■□□□□ 0.1
MDC1-209ENST00000613547 C19orf81C9J6K1 198 aa15.7■□□□□ 0.1
MDC1-209ENST00000613547 USP17L10C9JJH3 530 aa15.7■□□□□ 0.1
MDC1-209ENST00000613547 RANBP6O60518 1105 aaKnown RBP15.7■□□□□ 0.1
MDC1-209ENST00000613547 ICA1Q05084 483 aa15.7■□□□□ 0.1
MDC1-209ENST00000613547 SHROOM1Q2M3G4 852 aaPredicted RBP15.7■□□□□ 0.1
MDC1-209ENST00000613547 MS4A4AQ96JQ5 239 aa15.7■□□□□ 0.1
MDC1-209ENST00000613547 LSG1Q9H089 658 aaKnown RBP15.7■□□□□ 0.1
MDC1-209ENST00000613547 CNNM2Q9H8M5 875 aa15.7■□□□□ 0.1
MDC1-209ENST00000613547 ARHGEF10LQ9HCE6 1279 aa15.7■□□□□ 0.1
MDC1-209ENST00000613547 TMOD4Q9NZQ9 345 aa15.7■□□□□ 0.1
MDC1-209ENST00000613547 RBM8AQ9Y5S9 174 aaKnown RBP15.7■□□□□ 0.1
MDC1-209ENST00000613547 LAMB1P07942 1786 aa15.7■□□□□ 0.1
MDC1-209ENST00000613547 A0A0G2JLL6 359 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms