RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 RTEL1Q9NZ71 1219 aa18.95■□□□□ 0.62
CNOT3-208ENST00000613073 CYP2C19P33261 490 aa18.95■□□□□ 0.62
CNOT3-208ENST00000613073 GRAPQ13588 217 aa18.95■□□□□ 0.62
CNOT3-208ENST00000613073 GNL2Q13823 731 aaKnown RBP18.95■□□□□ 0.62
CNOT3-208ENST00000613073 FSIP1Q8NA03 581 aa18.95■□□□□ 0.62
CNOT3-208ENST00000613073 LINC00301Q8NCQ3 95 aa18.95■□□□□ 0.62
CNOT3-208ENST00000613073 GRAPLQ8TC17 118 aaPredicted RBP18.95■□□□□ 0.62
CNOT3-208ENST00000613073 FAM53CQ9NYF3 392 aa18.95■□□□□ 0.62
CNOT3-208ENST00000613073 FEZ2Q9UHY8 353 aaPredicted RBP18.95■□□□□ 0.62
CNOT3-208ENST00000613073 USP17L12C9JPN9 530 aa18.94■□□□□ 0.62
CNOT3-208ENST00000613073 USP17L21D6R901 530 aa18.94■□□□□ 0.62
CNOT3-208ENST00000613073 GUCY1A2P33402 732 aa18.94■□□□□ 0.62
CNOT3-208ENST00000613073 CCDC73Q6ZRK6 1079 aa18.94■□□□□ 0.62
CNOT3-208ENST00000613073 TDRD7Q8NHU6 1098 aaKnown RBP18.94■□□□□ 0.62
CNOT3-208ENST00000613073 GYS1P13807 737 aa18.94■□□□□ 0.62
CNOT3-208ENST00000613073 SSRP1Q08945 709 aaKnown RBP18.94■□□□□ 0.62
CNOT3-208ENST00000613073 ESR2Q92731 530 aa18.94■□□□□ 0.62
CNOT3-208ENST00000613073 MYH13Q9UKX3 1938 aa18.94■□□□□ 0.62
CNOT3-208ENST00000613073 TIAM2Q8IVF5 1701 aa18.94■□□□□ 0.62
CNOT3-208ENST00000613073 TNKSO95271 1327 aa18.94■□□□□ 0.62
CNOT3-208ENST00000613073 A0A1B0GVL5 298 aa18.93■□□□□ 0.62
CNOT3-208ENST00000613073 GOLGA6L19H0YKK7 550 aa18.93■□□□□ 0.62
CNOT3-208ENST00000613073 SNW1Q13573 536 aaKnown RBP18.93■□□□□ 0.62
CNOT3-208ENST00000613073 RTN1Q16799 776 aa18.93■□□□□ 0.62
CNOT3-208ENST00000613073 CTR9Q6PD62 1173 aa18.93■□□□□ 0.62
CNOT3-208ENST00000613073 BRAPQ7Z569 592 aa18.93■□□□□ 0.62
CNOT3-208ENST00000613073 NYAP1Q6ZVC0 841 aa18.93■□□□□ 0.62
CNOT3-208ENST00000613073 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.93■□□□□ 0.62
CNOT3-208ENST00000613073 RPGRQ92834 1020 aaKnown RBP18.93■□□□□ 0.62
CNOT3-208ENST00000613073 ERCC4Q92889 916 aaPredicted RBP18.93■□□□□ 0.62
CNOT3-208ENST00000613073 TMX1Q9H3N1 280 aa18.93■□□□□ 0.62
CNOT3-208ENST00000613073 SLC20A2Q08357 652 aa18.93■□□□□ 0.62
CNOT3-208ENST00000613073 TNNT3P45378 269 aaPredicted RBP18.92■□□□□ 0.62
CNOT3-208ENST00000613073 CLCN6P51797 869 aa18.92■□□□□ 0.62
CNOT3-208ENST00000613073 TRIM29Q14134 588 aa18.92■□□□□ 0.62
CNOT3-208ENST00000613073 BMS1Q14692 1282 aaKnown RBP18.92■□□□□ 0.62
CNOT3-208ENST00000613073 RBM43Q6ZSC3 357 aaKnown RBP18.92■□□□□ 0.62
CNOT3-208ENST00000613073 DZIP1Q86YF9 867 aaKnown RBP18.92■□□□□ 0.62
CNOT3-208ENST00000613073 ZNF654Q8IZM8 581 aa18.92■□□□□ 0.62
CNOT3-208ENST00000613073 BRIP1Q9BX63 1249 aa18.92■□□□□ 0.62
CNOT3-208ENST00000613073 ANAPC4Q9UJX5 808 aa18.92■□□□□ 0.62
CNOT3-208ENST00000613073 MYH2Q9UKX2 1941 aa18.92■□□□□ 0.62
CNOT3-208ENST00000613073 SPTLC2O15270 562 aa18.92■□□□□ 0.62
CNOT3-208ENST00000613073 SERPINB2P05120 415 aa18.92■□□□□ 0.62
CNOT3-208ENST00000613073 KINO60870 393 aaKnown RBP18.91■□□□□ 0.62
CNOT3-208ENST00000613073 CYP2D6P10635 497 aa18.91■□□□□ 0.62
CNOT3-208ENST00000613073 MARCKSP29966 332 aaPredicted RBP18.91■□□□□ 0.62
CNOT3-208ENST00000613073 ANO1Q5XXA6 986 aa18.91■□□□□ 0.62
CNOT3-208ENST00000613073 POLR3EQ9NVU0 708 aa18.91■□□□□ 0.62
CNOT3-208ENST00000613073 FHOD1Q9Y613 1164 aa18.91■□□□□ 0.62
CNOT3-208ENST00000613073 IRS2Q9Y4H2 1338 aa18.91■□□□□ 0.62
CNOT3-208ENST00000613073 FMNL1O95466 1100 aaPredicted RBP18.91■□□□□ 0.62
CNOT3-208ENST00000613073 IFNAR1P17181 557 aa18.91■□□□□ 0.62
CNOT3-208ENST00000613073 FAM160A1Q05DH4 1040 aa18.91■□□□□ 0.62
CNOT3-208ENST00000613073 C11orf57Q6ZUT1 292 aaPredicted RBP18.91■□□□□ 0.62
CNOT3-208ENST00000613073 FANCBQ8NB91 859 aa18.91■□□□□ 0.62
CNOT3-208ENST00000613073 ENGASEQ8NFI3 743 aa18.91■□□□□ 0.62
CNOT3-208ENST00000613073 DCP1AQ9NPI6 582 aaPredicted RBP18.91■□□□□ 0.62
CNOT3-208ENST00000613073 KCNJ14Q9UNX9 436 aa18.91■□□□□ 0.62
CNOT3-208ENST00000613073 ADRA2BP18089 450 aa18.9■□□□□ 0.62
CNOT3-208ENST00000613073 ADALQ6DHV7 355 aa18.9■□□□□ 0.62
CNOT3-208ENST00000613073 KRT27Q7Z3Y8 459 aa18.9■□□□□ 0.62
CNOT3-208ENST00000613073 ENAHQ8N8S7 591 aaPredicted RBP18.9■□□□□ 0.62
CNOT3-208ENST00000613073 MRPS27Q92552 414 aaKnown RBP18.9■□□□□ 0.62
CNOT3-208ENST00000613073 CRNKL1Q9BZJ0 848 aaKnown RBP18.9■□□□□ 0.62
CNOT3-208ENST00000613073 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.9■□□□□ 0.62
CNOT3-208ENST00000613073 NDUFA8P51970 172 aa18.9■□□□□ 0.62
CNOT3-208ENST00000613073 SEC23AQ15436 765 aa18.9■□□□□ 0.62
CNOT3-208ENST00000613073 GRIK5Q16478 980 aa18.9■□□□□ 0.62
CNOT3-208ENST00000613073 ARHGAP29Q52LW3 1261 aa18.9■□□□□ 0.62
CNOT3-208ENST00000613073 CCAR2Q8N163 923 aaKnown RBP18.9■□□□□ 0.62
CNOT3-208ENST00000613073 TMTC2Q8N394 836 aa18.9■□□□□ 0.62
CNOT3-208ENST00000613073 KCNG4Q8TDN1 519 aa18.9■□□□□ 0.62
CNOT3-208ENST00000613073 ZSCAN10Q96SZ4 725 aaPredicted RBP18.9■□□□□ 0.62
CNOT3-208ENST00000613073 PNMA6AP0CW24 399 aaPredicted RBP18.89■□□□□ 0.62
CNOT3-208ENST00000613073 PLA2G4AP47712 749 aa18.89■□□□□ 0.62
CNOT3-208ENST00000613073 GPSM2P81274 684 aa18.89■□□□□ 0.62
CNOT3-208ENST00000613073 SYT10Q6XYQ8 523 aa18.89■□□□□ 0.62
CNOT3-208ENST00000613073 XDHP47989 1333 aa18.89■□□□□ 0.61
CNOT3-208ENST00000613073 NMT2O60551 498 aa18.89■□□□□ 0.61
CNOT3-208ENST00000613073 YEATS4O95619 227 aa18.89■□□□□ 0.61
CNOT3-208ENST00000613073 DIXDC1Q155Q3 683 aa18.89■□□□□ 0.61
CNOT3-208ENST00000613073 FAM47AQ5JRC9 791 aa18.89■□□□□ 0.61
CNOT3-208ENST00000613073 TRIM22Q8IYM9 498 aa18.89■□□□□ 0.61
CNOT3-208ENST00000613073 LEMD3Q9Y2U8 911 aa18.89■□□□□ 0.61
CNOT3-208ENST00000613073 hCG_1642624A0A1W2PR95 340 aa18.88■□□□□ 0.61
CNOT3-208ENST00000613073 ST5P78524 1137 aa18.88■□□□□ 0.61
CNOT3-208ENST00000613073 CCZ1BP86790 482 aa18.88■□□□□ 0.61
CNOT3-208ENST00000613073 CCZ1P86791 482 aaPredicted RBP18.88■□□□□ 0.61
CNOT3-208ENST00000613073 IFIT1BQ5T764 474 aaKnown RBP18.88■□□□□ 0.61
CNOT3-208ENST00000613073 ZCCHC17Q9NP64 241 aaKnown RBP18.88■□□□□ 0.61
CNOT3-208ENST00000613073 LDHBP07195 334 aaKnown RBP18.88■□□□□ 0.61
CNOT3-208ENST00000613073 IRX3P78415 501 aaPredicted RBP18.88■□□□□ 0.61
CNOT3-208ENST00000613073 KLHL34Q8N239 644 aa18.88■□□□□ 0.61
CNOT3-208ENST00000613073 CRACR2BQ8N4Y2 399 aaPredicted RBP18.88■□□□□ 0.61
CNOT3-208ENST00000613073 PDS5AQ29RF7 1337 aaKnown RBP18.88■□□□□ 0.61
CNOT3-208ENST00000613073 BECN2A8MW95 431 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 BTBD18B2RXH4 712 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 UFL1O94874 794 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 NBPF11Q86T75 865 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms