RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 CYP2D6P10635 497 aa17.02■□□□□ 0.32
CTSA-211ENST00000606066 CAP2P40123 477 aa17.02■□□□□ 0.32
CTSA-211ENST00000606066 PPATQ06203 517 aa17.02■□□□□ 0.32
CTSA-211ENST00000606066 GABPAQ06546 454 aa17.02■□□□□ 0.32
CTSA-211ENST00000606066 TATDN1Q6P1N9 297 aa17.02■□□□□ 0.32
CTSA-211ENST00000606066 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.32
CTSA-211ENST00000606066 WNK4Q96J92 1243 aa17.02■□□□□ 0.32
CTSA-211ENST00000606066 DNAJC18Q9H819 358 aa17.02■□□□□ 0.32
CTSA-211ENST00000606066 ZNF287Q9HBT7 754 aa17.02■□□□□ 0.32
CTSA-211ENST00000606066 EPB41L4AQ9HCS5 686 aaPredicted RBP17.02■□□□□ 0.32
CTSA-211ENST00000606066 SLC3A2P08195 630 aaKnown RBP17.01■□□□□ 0.31
CTSA-211ENST00000606066 HSPD1P10809 573 aaKnown RBP17.01■□□□□ 0.31
CTSA-211ENST00000606066 ALX1Q15699 326 aa17.01■□□□□ 0.31
CTSA-211ENST00000606066 CERKLQ49MI3 558 aaPredicted RBP17.01■□□□□ 0.31
CTSA-211ENST00000606066 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
CTSA-211ENST00000606066 PRPF38BQ5VTL8 546 aaKnown RBP17.01■□□□□ 0.31
CTSA-211ENST00000606066 CASC1Q6TDU7 716 aa17.01■□□□□ 0.31
CTSA-211ENST00000606066 MANSC4A6NHS7 340 aaPredicted RBP17■□□□□ 0.31
CTSA-211ENST00000606066 ASNSP08243 561 aa17■□□□□ 0.31
CTSA-211ENST00000606066 INHBEP58166 350 aa17■□□□□ 0.31
CTSA-211ENST00000606066 SREBF2Q12772 1141 aa17■□□□□ 0.31
CTSA-211ENST00000606066 OTUD5Q96G74 571 aa17■□□□□ 0.31
CTSA-211ENST00000606066 TBC1D2Q9BYX2 928 aa17■□□□□ 0.31
CTSA-211ENST00000606066 CABP5Q9NP86 173 aa17■□□□□ 0.31
CTSA-211ENST00000606066 FOCADQ5VW36 1801 aa17■□□□□ 0.31
CTSA-211ENST00000606066 AK9Q5TCS8 1911 aa17■□□□□ 0.31
CTSA-211ENST00000606066 CYP2D7A0A087X1C5 515 aa16.99■□□□□ 0.31
CTSA-211ENST00000606066 PTPRAP18433 802 aa16.99■□□□□ 0.31
CTSA-211ENST00000606066 SHMT1P34896 483 aa16.99■□□□□ 0.31
CTSA-211ENST00000606066 MKRN3Q13064 507 aaKnown RBP16.99■□□□□ 0.31
CTSA-211ENST00000606066 PPIL2Q13356 520 aa16.99■□□□□ 0.31
CTSA-211ENST00000606066 FBXO46Q6PJ61 603 aaPredicted RBP16.99■□□□□ 0.31
CTSA-211ENST00000606066 C16orf86Q6ZW13 317 aa16.99■□□□□ 0.31
CTSA-211ENST00000606066 DYNLL2Q96FJ2 89 aa16.99■□□□□ 0.31
CTSA-211ENST00000606066 DSCC1Q9BVC3 393 aa16.99■□□□□ 0.31
CTSA-211ENST00000606066 MKNK2Q9HBH9 465 aa16.99■□□□□ 0.31
CTSA-211ENST00000606066 ZHX2Q9Y6X8 837 aa16.99■□□□□ 0.31
CTSA-211ENST00000606066 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 FOXP2O15409 715 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 ALDH1A1P00352 501 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 FGAP02671 866 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 CDK8P49336 464 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 GTF2A2P52657 109 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 PDE4BQ07343 736 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 PPARAQ07869 468 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 ABCB5Q2M3G0 1257 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 CCDC17Q96LX7 622 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 AS3MTQ9HBK9 375 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 CTNNA3Q9UI47 895 aa16.98■□□□□ 0.31
CTSA-211ENST00000606066 USP17L5A8MUK1 530 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 CXCL11O14625 94 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 IRF6O14896 467 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 SGSM2O43147 1006 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 FKTNO75072 461 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 CDC45O75419 566 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 GDF11O95390 407 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 GJA5P36382 358 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 EVX2Q03828 476 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 SNAPC2Q13487 334 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 RRP1BQ14684 758 aaKnown RBP16.97■□□□□ 0.31
CTSA-211ENST00000606066 KIAA1211Q6ZU35 1233 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 ZBTB21Q9ULJ3 1066 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 ROBO3Q96MS0 1386 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 NAV1Q8NEY1 1877 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
CTSA-211ENST00000606066 MPHOSPH10O00566 681 aaKnown RBP16.96■□□□□ 0.31
CTSA-211ENST00000606066 GH2P01242 217 aa16.96■□□□□ 0.31
CTSA-211ENST00000606066 ZNF444Q8N0Y2 327 aaPredicted RBP16.96■□□□□ 0.31
CTSA-211ENST00000606066 SLC44A5Q8NCS7 719 aa16.96■□□□□ 0.31
CTSA-211ENST00000606066 ANAPC4Q9UJX5 808 aa16.96■□□□□ 0.31
CTSA-211ENST00000606066 DDX60LQ5H9U9 1706 aaKnown RBP16.96■□□□□ 0.3
CTSA-211ENST00000606066 ZNF213O14771 459 aa16.95■□□□□ 0.3
CTSA-211ENST00000606066 CETPP11597 493 aa16.95■□□□□ 0.3
CTSA-211ENST00000606066 OTUD7BQ6GQQ9 843 aa16.95■□□□□ 0.3
CTSA-211ENST00000606066 TMEM179Q6ZVK1 233 aa16.95■□□□□ 0.3
CTSA-211ENST00000606066 STK11IPQ8N1F8 1099 aa16.95■□□□□ 0.3
CTSA-211ENST00000606066 ZNF280CQ8ND82 737 aa16.95■□□□□ 0.3
CTSA-211ENST00000606066 R3HDMLQ9H3Y0 253 aa16.95■□□□□ 0.3
CTSA-211ENST00000606066 KCNH4Q9UQ05 1017 aa16.95■□□□□ 0.3
CTSA-211ENST00000606066 AFG3L2Q9Y4W6 797 aa16.95■□□□□ 0.3
CTSA-211ENST00000606066 MYH1P12882 1939 aa16.95■□□□□ 0.3
CTSA-211ENST00000606066 TESPA1A2RU30 521 aaPredicted RBP16.94■□□□□ 0.3
CTSA-211ENST00000606066 SMIM22K7EJ46 135 aa16.94■□□□□ 0.3
CTSA-211ENST00000606066 PCP11498 1178 aaKnown RBP16.94■□□□□ 0.3
CTSA-211ENST00000606066 RAB3GAP1Q15042 981 aa16.94■□□□□ 0.3
CTSA-211ENST00000606066 IMMTQ16891 758 aaKnown RBP16.94■□□□□ 0.3
CTSA-211ENST00000606066 MS4A4AQ96JQ5 239 aa16.94■□□□□ 0.3
CTSA-211ENST00000606066 ESYT1Q9BSJ8 1104 aa16.94■□□□□ 0.3
CTSA-211ENST00000606066 WDR18Q9BV38 432 aa16.94■□□□□ 0.3
CTSA-211ENST00000606066 IL25Q9H293 177 aa16.94■□□□□ 0.3
CTSA-211ENST00000606066 CCL15-CCL14A0A0B4J2E2 113 aa16.93■□□□□ 0.3
CTSA-211ENST00000606066 TRIM75PA6NK02 468 aa16.93■□□□□ 0.3
CTSA-211ENST00000606066 JAG1P78504 1218 aa16.93■□□□□ 0.3
CTSA-211ENST00000606066 SPP2Q13103 211 aa16.93■□□□□ 0.3
CTSA-211ENST00000606066 CCL15Q16663 113 aa16.93■□□□□ 0.3
CTSA-211ENST00000606066 FASTKD5Q7L8L6 764 aaKnown RBP16.93■□□□□ 0.3
CTSA-211ENST00000606066 RNF41Q9H4P4 317 aaPredicted RBP16.93■□□□□ 0.3
CTSA-211ENST00000606066 U3KPZ7 1027 aaPredicted RBP16.93■□□□□ 0.3
CTSA-211ENST00000606066 SIPA1L1O43166 1804 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms