RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 SLC6A19Q695T7 634 aa11.44□□□□□ -0.58
SGMS1-206ENST00000602565 PAOXQ6QHF9 649 aa11.44□□□□□ -0.58
SGMS1-206ENST00000602565 BEND4Q6ZU67 534 aa11.44□□□□□ -0.58
SGMS1-206ENST00000602565 EZH1Q92800 747 aaPredicted RBP11.44□□□□□ -0.58
SGMS1-206ENST00000602565 TMEM87BQ96K49 555 aa11.44□□□□□ -0.58
SGMS1-206ENST00000602565 SSBP4Q9BWG4 385 aaPredicted RBP11.44□□□□□ -0.58
SGMS1-206ENST00000602565 TJP2Q9UDY2 1190 aa11.44□□□□□ -0.58
SGMS1-206ENST00000602565 MRVI1Q9Y6F6 885 aa11.44□□□□□ -0.58
SGMS1-206ENST00000602565 SMARCA5O60264 1052 aaPredicted RBP11.43□□□□□ -0.58
SGMS1-206ENST00000602565 UBE3DQ7Z6J8 389 aa11.43□□□□□ -0.58
SGMS1-206ENST00000602565 MCATQ8IVS2 390 aaKnown RBP11.43□□□□□ -0.58
SGMS1-206ENST00000602565 OR6P1Q8NGX9 317 aa11.43□□□□□ -0.58
SGMS1-206ENST00000602565 NKG7Q16617 165 aa11.42□□□□□ -0.58
SGMS1-206ENST00000602565 OVOS1Q6IE37 1185 aa11.42□□□□□ -0.58
SGMS1-206ENST00000602565 MRPL41Q8IXM3 137 aaKnown RBP11.42□□□□□ -0.58
SGMS1-206ENST00000602565 TMEM40Q8WWA1 233 aa11.42□□□□□ -0.58
SGMS1-206ENST00000602565 CLEC10AQ8IUN9 316 aa11.41□□□□□ -0.58
SGMS1-206ENST00000602565 DHX38Q92620 1227 aaKnown RBP11.41□□□□□ -0.58
SGMS1-206ENST00000602565 SHDQ96IW2 340 aa11.41□□□□□ -0.58
SGMS1-206ENST00000602565 DPH2Q9BQC3 489 aaPredicted RBP11.41□□□□□ -0.58
SGMS1-206ENST00000602565 FOXQ1Q9C009 403 aa11.41□□□□□ -0.58
SGMS1-206ENST00000602565 ANTXR1Q9H6X2 564 aa11.41□□□□□ -0.58
SGMS1-206ENST00000602565 SLC22A31A6NKX4 558 aa11.4□□□□□ -0.58
SGMS1-206ENST00000602565 MEIS3P2A8K0S8 358 aa11.4□□□□□ -0.58
SGMS1-206ENST00000602565 LRIG2O94898 1065 aa11.4□□□□□ -0.58
SGMS1-206ENST00000602565 GIPRP48546 466 aa11.4□□□□□ -0.58
SGMS1-206ENST00000602565 PRAMEF13Q5VWM6 474 aa11.4□□□□□ -0.58
SGMS1-206ENST00000602565 ARMCX6Q7L4S7 300 aa11.4□□□□□ -0.58
SGMS1-206ENST00000602565 LSRQ86X29 649 aaPredicted RBP11.4□□□□□ -0.58
SGMS1-206ENST00000602565 PHACTR4Q8IZ21 702 aa11.4□□□□□ -0.58
SGMS1-206ENST00000602565 RBBP8NLQ8NC74 664 aaPredicted RBP11.4□□□□□ -0.58
SGMS1-206ENST00000602565 ARMC5Q96C12 935 aa11.4□□□□□ -0.58
SGMS1-206ENST00000602565 ZNF408Q9H9D4 720 aa11.4□□□□□ -0.58
SGMS1-206ENST00000602565 STOML1Q9UBI4 398 aa11.4□□□□□ -0.58
SGMS1-206ENST00000602565 RAXQ9Y2V3 346 aa11.4□□□□□ -0.58
SGMS1-206ENST00000602565 UPK3BL1B0FP48 263 aa11.39□□□□□ -0.59
SGMS1-206ENST00000602565 CHURC1-FNTBB4DL54 471 aa11.39□□□□□ -0.59
SGMS1-206ENST00000602565 UPK3BL2E5RIL1 263 aa11.39□□□□□ -0.59
SGMS1-206ENST00000602565 RAG1P15918 1043 aa11.39□□□□□ -0.59
SGMS1-206ENST00000602565 CAP2P40123 477 aa11.39□□□□□ -0.59
SGMS1-206ENST00000602565 SLBPQ14493 270 aaKnown RBP eCLIP11.39□□□□□ -0.59
SGMS1-206ENST00000602565 ARSHQ5FYA8 562 aa11.39□□□□□ -0.59
SGMS1-206ENST00000602565 XAGE3Q8WTP9 111 aa11.39□□□□□ -0.59
SGMS1-206ENST00000602565 FAM83CQ9BQN1 747 aa11.39□□□□□ -0.59
SGMS1-206ENST00000602565 TPSG1Q9NRR2 321 aa11.39□□□□□ -0.59
SGMS1-206ENST00000602565 R3HCC1Q9Y3T6 440 aaKnown RBP11.39□□□□□ -0.59
SGMS1-206ENST00000602565 DNAJA2O60884 412 aa11.38□□□□□ -0.59
SGMS1-206ENST00000602565 CST3P01034 146 aaPredicted RBP11.38□□□□□ -0.59
SGMS1-206ENST00000602565 NLRC3Q7RTR2 1065 aa11.38□□□□□ -0.59
SGMS1-206ENST00000602565 MFSD2AQ8NA29 543 aa11.38□□□□□ -0.59
SGMS1-206ENST00000602565 TM9SF2Q99805 663 aa11.38□□□□□ -0.59
SGMS1-206ENST00000602565 DYNC1LI2O43237 492 aaPredicted RBP11.37□□□□□ -0.59
SGMS1-206ENST00000602565 ETFBP38117 255 aa11.37□□□□□ -0.59
SGMS1-206ENST00000602565 TNNI3KQ59H18 835 aa11.37□□□□□ -0.59
SGMS1-206ENST00000602565 SLFN12Q8IYM2 578 aa11.37□□□□□ -0.59
SGMS1-206ENST00000602565 GIMAP7Q8NHV1 300 aa11.37□□□□□ -0.59
SGMS1-206ENST00000602565 ATG4CQ96DT6 458 aa11.37□□□□□ -0.59
SGMS1-206ENST00000602565 HIRIP3Q9BW71 556 aaPredicted RBP11.37□□□□□ -0.59
SGMS1-206ENST00000602565 ITGB2P05107 769 aa11.36□□□□□ -0.59
SGMS1-206ENST00000602565 NCLP19338 710 aaKnown RBP11.36□□□□□ -0.59
SGMS1-206ENST00000602565 CHMP4BP1P59074 171 aa11.36□□□□□ -0.59
SGMS1-206ENST00000602565 CDK5R2Q13319 367 aa11.36□□□□□ -0.59
SGMS1-206ENST00000602565 PPP2R5EQ16537 467 aa11.36□□□□□ -0.59
SGMS1-206ENST00000602565 PRR23CQ6ZRP0 262 aa11.36□□□□□ -0.59
SGMS1-206ENST00000602565 CKAP2LQ8IYA6 745 aa11.36□□□□□ -0.59
SGMS1-206ENST00000602565 C7orf69Q9H7B7 122 aa11.36□□□□□ -0.59
SGMS1-206ENST00000602565 HMX2A2RU54 273 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 NME1P15531 152 aaKnown RBP11.35□□□□□ -0.59
SGMS1-206ENST00000602565 DOC2BQ14184 412 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 CDCP2Q5VXM1 449 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 MIPEPQ99797 713 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 CNNM2Q9H8M5 875 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 PRKAG3Q9UGI9 489 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 SMAD7O15105 426 aaKnown RBP11.35□□□□□ -0.59
SGMS1-206ENST00000602565 PPM1GO15355 546 aaPredicted RBP11.35□□□□□ -0.59
SGMS1-206ENST00000602565 GUCY2CP25092 1073 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 GBP1P32455 592 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 RUFY4Q6ZNE9 571 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 CYB5D2Q8WUJ1 264 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 CCDC74BQ96LY2 380 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 TBC1D32Q96NH3 1257 aa11.35□□□□□ -0.59
SGMS1-206ENST00000602565 DNAJC2Q99543 621 aaKnown RBP11.35□□□□□ -0.59
SGMS1-206ENST00000602565 MSTNO14793 375 aa11.34□□□□□ -0.59
SGMS1-206ENST00000602565 GPAT2Q6NUI2 795 aa11.34□□□□□ -0.59
SGMS1-206ENST00000602565 SEZ6L2Q6UXD5 910 aa11.34□□□□□ -0.59
SGMS1-206ENST00000602565 TOP6BLQ8N6T0 577 aa11.34□□□□□ -0.59
SGMS1-206ENST00000602565 KIF2CQ99661 725 aa11.34□□□□□ -0.59
SGMS1-206ENST00000602565 PRDM10Q9NQV6 1147 aa11.34□□□□□ -0.59
SGMS1-206ENST00000602565 C1GALT1Q9NS00 363 aa11.34□□□□□ -0.59
SGMS1-206ENST00000602565 CADPSQ9ULU8 1353 aa11.33□□□□□ -0.6
SGMS1-206ENST00000602565 ANKS3Q6ZW76 656 aa11.33□□□□□ -0.6
SGMS1-206ENST00000602565 TAB3Q8N5C8 712 aaPredicted RBP11.33□□□□□ -0.6
SGMS1-206ENST00000602565 FAM169BQ8N8A8 192 aa11.33□□□□□ -0.6
SGMS1-206ENST00000602565 ACTR10Q9NZ32 417 aa11.33□□□□□ -0.6
SGMS1-206ENST00000602565 SLC12A7Q9Y666 1083 aa11.33□□□□□ -0.6
SGMS1-206ENST00000602565 FAM86C2PA6NEL3 165 aa11.32□□□□□ -0.6
SGMS1-206ENST00000602565 TNFRSF10CO14798 259 aa11.32□□□□□ -0.6
SGMS1-206ENST00000602565 LETMD1Q6P1Q0 360 aa11.32□□□□□ -0.6
SGMS1-206ENST00000602565 DPH6Q7L8W6 267 aa11.32□□□□□ -0.6
SGMS1-206ENST00000602565 C19orf47Q8N9M1 422 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms