RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 MTMR2Q13614 643 aa25.92■■□□□ 1.74
PNKP-212ENST00000599454 MAPKAPK5Q8IW41 473 aa25.92■■□□□ 1.74
PNKP-212ENST00000599454 CRACR2BQ8N4Y2 399 aaPredicted RBP25.92■■□□□ 1.74
PNKP-212ENST00000599454 NECAB2Q7Z6G3 386 aa25.91■■□□□ 1.74
PNKP-212ENST00000599454 RPTORQ8N122 1335 aa25.9■■□□□ 1.74
PNKP-212ENST00000599454 SURF6O75683 361 aaKnown RBP25.9■■□□□ 1.74
PNKP-212ENST00000599454 ADGRA1Q86SQ6 560 aa25.9■■□□□ 1.74
PNKP-212ENST00000599454 DNAJC18Q9H819 358 aa25.9■■□□□ 1.74
PNKP-212ENST00000599454 HMX1Q9NP08 348 aaPredicted RBP25.9■■□□□ 1.74
PNKP-212ENST00000599454 NOP58Q9Y2X3 529 aaKnown RBP25.9■■□□□ 1.74
PNKP-212ENST00000599454 USP17L10C9JJH3 530 aa25.89■■□□□ 1.74
PNKP-212ENST00000599454 HLA-DOAP06340 250 aa25.89■■□□□ 1.74
PNKP-212ENST00000599454 CERS3Q8IU89 383 aa25.89■■□□□ 1.74
PNKP-212ENST00000599454 GTF3C2Q8WUA4 911 aaPredicted RBP25.89■■□□□ 1.74
PNKP-212ENST00000599454 PAWRQ96IZ0 340 aaKnown RBP25.89■■□□□ 1.74
PNKP-212ENST00000599454 DDX60LQ5H9U9 1706 aaKnown RBP25.88■■□□□ 1.73
PNKP-212ENST00000599454 GPRC5AQ8NFJ5 357 aa25.88■■□□□ 1.73
PNKP-212ENST00000599454 P2RX7Q99572 595 aaKnown RBP25.88■■□□□ 1.73
PNKP-212ENST00000599454 PALD1Q9ULE6 856 aa25.88■■□□□ 1.73
PNKP-212ENST00000599454 ZBTB21Q9ULJ3 1066 aa25.88■■□□□ 1.73
PNKP-212ENST00000599454 RANBP2P49792 3224 aaKnown RBP25.87■■□□□ 1.73
PNKP-212ENST00000599454 ZAP70P43403 619 aa25.87■■□□□ 1.73
PNKP-212ENST00000599454 HERVK_113P62684 666 aa25.87■■□□□ 1.73
PNKP-212ENST00000599454 SOCS4Q8WXH5 440 aa25.87■■□□□ 1.73
PNKP-212ENST00000599454 XRCC5P13010 732 aaKnown RBP25.86■■□□□ 1.73
PNKP-212ENST00000599454 TMED8Q6PL24 325 aaPredicted RBP25.86■■□□□ 1.73
PNKP-212ENST00000599454 TRMT44Q8IYL2 757 aaKnown RBP25.86■■□□□ 1.73
PNKP-212ENST00000599454 NUDT12Q9BQG2 462 aa25.86■■□□□ 1.73
PNKP-212ENST00000599454 PIH1D3Q9NQM4 214 aaKnown RBP25.86■■□□□ 1.73
PNKP-212ENST00000599454 DBNLQ9UJU6 430 aaKnown RBP25.86■■□□□ 1.73
PNKP-212ENST00000599454 GDF11O95390 407 aa25.85■■□□□ 1.73
PNKP-212ENST00000599454 MAPK4P31152 587 aa25.85■■□□□ 1.73
PNKP-212ENST00000599454 JAG1P78504 1218 aa25.85■■□□□ 1.73
PNKP-212ENST00000599454 FTSJ3Q8IY81 847 aaKnown RBP25.85■■□□□ 1.73
PNKP-212ENST00000599454 CYP7A1P22680 504 aa25.84■■□□□ 1.73
PNKP-212ENST00000599454 USP17L2Q6R6M4 530 aa25.84■■□□□ 1.73
PNKP-212ENST00000599454 DIS3LQ8TF46 1054 aaKnown RBP25.84■■□□□ 1.73
PNKP-212ENST00000599454 TRIB2Q92519 343 aa25.84■■□□□ 1.73
PNKP-212ENST00000599454 NBPF3Q9H094 633 aa25.84■■□□□ 1.73
PNKP-212ENST00000599454 CYP2B6P20813 491 aa25.83■■□□□ 1.73
PNKP-212ENST00000599454 PDE3AQ14432 1141 aa25.83■■□□□ 1.73
PNKP-212ENST00000599454 MAP3K21Q5TCX8 1036 aa25.83■■□□□ 1.73
PNKP-212ENST00000599454 C1orf115Q9H7X2 142 aa25.83■■□□□ 1.73
PNKP-212ENST00000599454 TXNRD2Q9NNW7 524 aa25.83■■□□□ 1.73
PNKP-212ENST00000599454 SAP30BPQ9UHR5 308 aaKnown RBP25.83■■□□□ 1.73
PNKP-212ENST00000599454 ERVK-9P63128 1117 aa25.82■■□□□ 1.72
PNKP-212ENST00000599454 ERVK-24P63145 666 aa25.82■■□□□ 1.72
PNKP-212ENST00000599454 DYNLL1P63167 89 aaKnown RBP25.82■■□□□ 1.72
PNKP-212ENST00000599454 TRIM32Q13049 653 aa25.82■■□□□ 1.72
PNKP-212ENST00000599454 RBPJLQ9UBG7 517 aa25.82■■□□□ 1.72
PNKP-212ENST00000599454 OGDHLQ9ULD0 1010 aa25.82■■□□□ 1.72
PNKP-212ENST00000599454 IDH1O75874 414 aaKnown RBP25.81■■□□□ 1.72
PNKP-212ENST00000599454 SHROOM1Q2M3G4 852 aaPredicted RBP25.81■■□□□ 1.72
PNKP-212ENST00000599454 ITPRIPQ8IWB1 547 aa25.81■■□□□ 1.72
PNKP-212ENST00000599454 CCAR1Q8IX12 1150 aaKnown RBP25.81■■□□□ 1.72
PNKP-212ENST00000599454 EAF2Q96CJ1 260 aaPredicted RBP25.81■■□□□ 1.72
PNKP-212ENST00000599454 C12orf42Q96LP6 360 aa25.81■■□□□ 1.72
PNKP-212ENST00000599454 CCDC8Q9H0W5 538 aaPredicted RBP25.81■■□□□ 1.72
PNKP-212ENST00000599454 EHD4Q9H223 541 aa25.81■■□□□ 1.72
PNKP-212ENST00000599454 EMILIN3Q9NT22 766 aa25.81■■□□□ 1.72
PNKP-212ENST00000599454 SZT2Q5T011 3432 aa25.81■■□□□ 1.72
PNKP-212ENST00000599454 PRKAR2AP13861 404 aaKnown RBP25.8■■□□□ 1.72
PNKP-212ENST00000599454 USP5P45974 858 aa25.8■■□□□ 1.72
PNKP-212ENST00000599454 TATDN1Q6P1N9 297 aa25.8■■□□□ 1.72
PNKP-212ENST00000599454 C11orf49Q9H6J7 331 aa25.8■■□□□ 1.72
PNKP-212ENST00000599454 TLR7Q9NYK1 1049 aaKnown RBP25.8■■□□□ 1.72
PNKP-212ENST00000599454 FRMPD3Q5JV73 1810 aa25.79■■□□□ 1.72
PNKP-212ENST00000599454 NAV1Q8NEY1 1877 aa25.79■■□□□ 1.72
PNKP-212ENST00000599454 GH2P01242 217 aa25.79■■□□□ 1.72
PNKP-212ENST00000599454 ZKSCAN1P17029 563 aaPredicted RBP25.79■■□□□ 1.72
PNKP-212ENST00000599454 BMP8BP34820 402 aa25.79■■□□□ 1.72
PNKP-212ENST00000599454 RGS2P41220 211 aa25.79■■□□□ 1.72
PNKP-212ENST00000599454 MAP3K12Q12852 859 aa25.79■■□□□ 1.72
PNKP-212ENST00000599454 TTC6Q86TZ1 520 aa25.79■■□□□ 1.72
PNKP-212ENST00000599454 ERC1Q8IUD2 1116 aa25.79■■□□□ 1.72
PNKP-212ENST00000599454 USP6NLQ92738 828 aa25.79■■□□□ 1.72
PNKP-212ENST00000599454 STAP2Q9UGK3 403 aa25.79■■□□□ 1.72
PNKP-212ENST00000599454 SERPINB13Q9UIV8 391 aa25.79■■□□□ 1.72
PNKP-212ENST00000599454 MNX1P50219 401 aaPredicted RBP25.78■■□□□ 1.72
PNKP-212ENST00000599454 USP14P54578 494 aa25.78■■□□□ 1.72
PNKP-212ENST00000599454 Q3C1V9 767 aa25.78■■□□□ 1.72
PNKP-212ENST00000599454 GPR142Q7Z601 462 aa25.78■■□□□ 1.72
PNKP-212ENST00000599454 C7orf61Q8IZ16 206 aa25.78■■□□□ 1.72
PNKP-212ENST00000599454 MAGEB6Q8N7X4 407 aa25.78■■□□□ 1.72
PNKP-212ENST00000599454 MIGA1Q8NAN2 632 aa25.78■■□□□ 1.72
PNKP-212ENST00000599454 FEZ1Q99689 392 aa25.78■■□□□ 1.72
PNKP-212ENST00000599454 PLEKHH3Q7Z736 793 aa25.77■■□□□ 1.72
PNKP-212ENST00000599454 GDF15Q99988 308 aa25.77■■□□□ 1.72
PNKP-212ENST00000599454 PAGR1Q9BTK6 254 aa25.77■■□□□ 1.72
PNKP-212ENST00000599454 RABGAP1Q9Y3P9 1069 aa25.77■■□□□ 1.72
PNKP-212ENST00000599454 MYH8P13535 1937 aa25.76■■□□□ 1.72
PNKP-212ENST00000599454 USP17L15C9J2P7 530 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 USP17L13C9JLJ4 530 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 USP17L11C9JVI0 530 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 USP17L18D6R9N7 530 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 USP17L22D6RA61 530 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 USP17L17D6RBQ6 530 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 USP17L19D6RCP7 530 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 USP17L20D6RJB6 530 aa25.76■■□□□ 1.71
PNKP-212ENST00000599454 PEX10O60683 326 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms