RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 ADCY7P51828 1080 aa14.9□□□□□ -0.02
SMARCA4-216ENST00000591545 UBXN1Q04323 297 aa14.9□□□□□ -0.02
SMARCA4-216ENST00000591545 CHRNDQ07001 517 aa14.9□□□□□ -0.02
SMARCA4-216ENST00000591545 DALRD3Q5D0E6 543 aaKnown RBP14.9□□□□□ -0.02
SMARCA4-216ENST00000591545 CCDC117Q8IWD4 279 aaPredicted RBP14.9□□□□□ -0.02
SMARCA4-216ENST00000591545 JAKMIP2Q96AA8 810 aa14.9□□□□□ -0.02
SMARCA4-216ENST00000591545 PAGR1Q9BTK6 254 aa14.9□□□□□ -0.02
SMARCA4-216ENST00000591545 CEP83Q9Y592 693 aa14.9□□□□□ -0.02
SMARCA4-216ENST00000591545 PLCD1P51178 756 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 TERF1P54274 439 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 RILPL1Q5EBL4 403 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 ZNF569Q5MCW4 686 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 V9GY48 417 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 IGSF1Q8N6C5 1336 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 ATP5JP18859 108 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 CCT6AP40227 531 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 SYT10Q6XYQ8 523 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 SMAP1Q8IYB5 467 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 FAM76AQ8TAV0 307 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 SCNN1DP51172 638 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 SV2BQ7L1I2 683 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 LLPHQ9BRT6 129 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 AKR1B15C9JRZ8 316 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 CHMP2AO43633 222 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 DNM2P50570 870 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 CERKQ8TCT0 537 aa14.89□□□□□ -0.03
SMARCA4-216ENST00000591545 CFBP00751 764 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 GRIPAP1Q4V328 841 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 CEP128Q6ZU80 1094 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 KRT25Q7Z3Z0 450 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 VPS18Q9P253 973 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 TET3O43151 1660 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 KIF1BO60333 1816 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 SUPT20HL1Q3ZLR7 823 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 GADL1Q6ZQY3 521 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 BAG1Q99933 345 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 GINS2Q9Y248 185 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 PNMA6EA0A0J9YXQ4 647 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 TTC31Q49AM3 519 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 GUCA1BQ9UMX6 200 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 ATP2C2O75185 946 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 RPS6KB1P23443 525 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 MICALL1Q8N3F8 863 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 KIFC2Q96AC6 838 aa14.88□□□□□ -0.03
SMARCA4-216ENST00000591545 ARHGEF35A5YM69 484 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 MXRA7P84157 204 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 CFAP58Q5T655 872 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 NLRX1Q86UT6 975 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 FNBP1Q96RU3 617 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 MTUS1Q9ULD2 1270 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 NONOQ15233 471 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 GNPTABQ3T906 1256 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 VWA3BQ502W6 1294 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 DPH6Q7L8W6 267 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 TRIM6Q9C030 488 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 SEMA3EO15041 775 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 LPXNO60711 386 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 CTDSPL2Q05D32 466 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 USH1GQ495M9 461 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 CDAN1Q8IWY9 1227 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 SAMD15Q9P1V8 674 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 CLTCL1P53675 1640 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 CCDC169A6NNP5 214 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 SLC27A2O14975 620 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 ATP2A2P16615 1042 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 STRN3Q13033 797 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 KIAA1524Q8TCG1 905 aa14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 NAP1L3Q99457 506 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-216ENST00000591545 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.87□□□□□ -0.035e-6■□□□□ 10.3
SMARCA4-216ENST00000591545 ZNF174Q15697 407 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 CERKLQ49MI3 558 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 HSP90AA4PQ58FG1 418 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 CPLX4Q7Z7G2 160 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 EXOC7Q9UPT5 735 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 ERVV-1B6SEH8 477 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 USP17L12C9JPN9 530 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 USP17L21D6R901 530 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 BTDP43251 543 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 IMPACTQ9P2X3 320 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 PALLDQ8WX93 1383 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 ATP5DP30049 168 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 BCAMP50895 628 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 ZBTB16Q05516 673 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 KARSQ15046 597 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 RTKN2Q8IZC4 609 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 SSX2IPQ9Y2D8 614 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 HARSP12081 509 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 ZNF445P59923 1031 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 PPARAQ07869 468 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 AKNAD1Q5T1N1 836 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 TTLL6Q8N841 843 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 SELENOSQ9BQE4 189 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 LZTFL1Q9NQ48 299 aa14.86□□□□□ -0.03
SMARCA4-216ENST00000591545 SLC8A3P57103 927 aa14.85□□□□□ -0.03
SMARCA4-216ENST00000591545 SETDB1Q15047 1291 aa14.85□□□□□ -0.03
SMARCA4-216ENST00000591545 FRMD4BQ9Y2L6 1034 aa14.85□□□□□ -0.03
SMARCA4-216ENST00000591545 A2ML1A8K2U0 1454 aa14.85□□□□□ -0.03
SMARCA4-216ENST00000591545 MAP3K4Q9Y6R4 1608 aa14.85□□□□□ -0.03
SMARCA4-216ENST00000591545 VWA3AA6NCI4 1184 aa14.85□□□□□ -0.03
SMARCA4-216ENST00000591545 EVCP57679 992 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms