RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 NECAB2Q7Z6G3 386 aa17.75■□□□□ 0.43
SDF2-202ENST00000585428 MAPKAPK5Q8IW41 473 aa17.75■□□□□ 0.43
SDF2-202ENST00000585428 ANKLE1Q8NAG6 615 aa17.75■□□□□ 0.43
SDF2-202ENST00000585428 HMX1Q9NP08 348 aaPredicted RBP17.75■□□□□ 0.43
SDF2-202ENST00000585428 RBPJLQ9UBG7 517 aa17.75■□□□□ 0.43
SDF2-202ENST00000585428 FLT1P17948 1338 aa17.74■□□□□ 0.43
SDF2-202ENST00000585428 PTPRFP10586 1907 aa17.74■□□□□ 0.43
SDF2-202ENST00000585428 USP17L10C9JJH3 530 aa17.74■□□□□ 0.43
SDF2-202ENST00000585428 SURF6O75683 361 aaKnown RBP17.74■□□□□ 0.43
SDF2-202ENST00000585428 ZAP70P43403 619 aa17.74■□□□□ 0.43
SDF2-202ENST00000585428 SHROOM1Q2M3G4 852 aaPredicted RBP17.74■□□□□ 0.43
SDF2-202ENST00000585428 Q3C1V9 767 aa17.74■□□□□ 0.43
SDF2-202ENST00000585428 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
SDF2-202ENST00000585428 POTEEQ6S8J3 1075 aa17.74■□□□□ 0.43
SDF2-202ENST00000585428 GPRC5AQ8NFJ5 357 aa17.74■□□□□ 0.43
SDF2-202ENST00000585428 DIS3LQ8TF46 1054 aaKnown RBP17.74■□□□□ 0.43
SDF2-202ENST00000585428 TXNRD2Q9NNW7 524 aa17.74■□□□□ 0.43
SDF2-202ENST00000585428 PIH1D3Q9NQM4 214 aaKnown RBP17.74■□□□□ 0.43
SDF2-202ENST00000585428 STAP2Q9UGK3 403 aa17.74■□□□□ 0.43
SDF2-202ENST00000585428 PEX10O60683 326 aa17.73■□□□□ 0.43
SDF2-202ENST00000585428 XRCC5P13010 732 aaKnown RBP17.73■□□□□ 0.43
SDF2-202ENST00000585428 HERVK_113P62684 666 aa17.73■□□□□ 0.43
SDF2-202ENST00000585428 MAP3K21Q5TCX8 1036 aa17.73■□□□□ 0.43
SDF2-202ENST00000585428 EMILIN3Q9NT22 766 aa17.73■□□□□ 0.43
SDF2-202ENST00000585428 TMOD4Q9NZQ9 345 aa17.73■□□□□ 0.43
SDF2-202ENST00000585428 CEP290O15078 2479 aa17.72■□□□□ 0.43
SDF2-202ENST00000585428 IRX3P78415 501 aaPredicted RBP17.72■□□□□ 0.43
SDF2-202ENST00000585428 TRIB2Q92519 343 aa17.72■□□□□ 0.43
SDF2-202ENST00000585428 USP6NLQ92738 828 aa17.72■□□□□ 0.43
SDF2-202ENST00000585428 OGDHLQ9ULD0 1010 aa17.72■□□□□ 0.43
SDF2-202ENST00000585428 CYP2B6P20813 491 aa17.71■□□□□ 0.43
SDF2-202ENST00000585428 BMP8BP34820 402 aa17.71■□□□□ 0.43
SDF2-202ENST00000585428 DYNLL1P63167 89 aaKnown RBP17.71■□□□□ 0.43
SDF2-202ENST00000585428 TATDN1Q6P1N9 297 aa17.71■□□□□ 0.43
SDF2-202ENST00000585428 CRACR2BQ8N4Y2 399 aaPredicted RBP17.71■□□□□ 0.43
SDF2-202ENST00000585428 EAF2Q96CJ1 260 aaPredicted RBP17.71■□□□□ 0.43
SDF2-202ENST00000585428 GDF15Q99988 308 aa17.71■□□□□ 0.43
SDF2-202ENST00000585428 NUDT12Q9BQG2 462 aa17.71■□□□□ 0.43
SDF2-202ENST00000585428 NBPF3Q9H094 633 aa17.71■□□□□ 0.43
SDF2-202ENST00000585428 DBNLQ9UJU6 430 aaKnown RBP17.71■□□□□ 0.43
SDF2-202ENST00000585428 TRIOBPQ9H2D6 2365 aa17.71■□□□□ 0.42
SDF2-202ENST00000585428 GDF11O95390 407 aa17.7■□□□□ 0.42
SDF2-202ENST00000585428 CYP7A1P22680 504 aa17.7■□□□□ 0.42
SDF2-202ENST00000585428 MAPK4P31152 587 aa17.7■□□□□ 0.42
SDF2-202ENST00000585428 OS9Q13438 667 aaPredicted RBP17.7■□□□□ 0.42
SDF2-202ENST00000585428 CCDC8Q9H0W5 538 aaPredicted RBP17.7■□□□□ 0.42
SDF2-202ENST00000585428 SAP30BPQ9UHR5 308 aaKnown RBP17.7■□□□□ 0.42
SDF2-202ENST00000585428 ZBTB21Q9ULJ3 1066 aa17.7■□□□□ 0.42
SDF2-202ENST00000585428 DOCK3Q8IZD9 2030 aa17.7■□□□□ 0.42
SDF2-202ENST00000585428 SOX1O00570 391 aaPredicted RBP17.69■□□□□ 0.42
SDF2-202ENST00000585428 MORN1Q5T089 497 aa17.69■□□□□ 0.42
SDF2-202ENST00000585428 USP17L2Q6R6M4 530 aa17.69■□□□□ 0.42
SDF2-202ENST00000585428 TRMT44Q8IYL2 757 aaKnown RBP17.69■□□□□ 0.42
SDF2-202ENST00000585428 TRIM34Q9BYJ4 488 aa17.69■□□□□ 0.42
SDF2-202ENST00000585428 TLR7Q9NYK1 1049 aaKnown RBP17.69■□□□□ 0.42
SDF2-202ENST00000585428 LOC285556D6RIA3 1793 aa17.68■□□□□ 0.42
SDF2-202ENST00000585428 HLA-DOAP06340 250 aa17.68■□□□□ 0.42
SDF2-202ENST00000585428 ERVK-9P63128 1117 aa17.68■□□□□ 0.42
SDF2-202ENST00000585428 ERVK-24P63145 666 aa17.68■□□□□ 0.42
SDF2-202ENST00000585428 CACNB2Q08289 660 aaPredicted RBP17.68■□□□□ 0.42
SDF2-202ENST00000585428 CERS3Q8IU89 383 aa17.68■□□□□ 0.42
SDF2-202ENST00000585428 GTF3C2Q8WUA4 911 aaPredicted RBP17.68■□□□□ 0.42
SDF2-202ENST00000585428 SOCS4Q8WXH5 440 aa17.68■□□□□ 0.42
SDF2-202ENST00000585428 C12orf42Q96LP6 360 aa17.68■□□□□ 0.42
SDF2-202ENST00000585428 PORCNQ9H237 461 aa17.68■□□□□ 0.42
SDF2-202ENST00000585428 C11orf49Q9H6J7 331 aa17.68■□□□□ 0.42
SDF2-202ENST00000585428 C1orf115Q9H7X2 142 aa17.68■□□□□ 0.42
SDF2-202ENST00000585428 GH2P01242 217 aa17.67■□□□□ 0.42
SDF2-202ENST00000585428 RLBP1P12271 317 aa17.67■□□□□ 0.42
SDF2-202ENST00000585428 PRKAR2AP13861 404 aaKnown RBP17.67■□□□□ 0.42
SDF2-202ENST00000585428 LHX8Q68G74 356 aa17.67■□□□□ 0.42
SDF2-202ENST00000585428 TMED8Q6PL24 325 aaPredicted RBP17.67■□□□□ 0.42
SDF2-202ENST00000585428 GPR142Q7Z601 462 aa17.67■□□□□ 0.42
SDF2-202ENST00000585428 IDH1O75874 414 aaKnown RBP17.66■□□□□ 0.42
SDF2-202ENST00000585428 PLEKHH3Q7Z736 793 aa17.66■□□□□ 0.42
SDF2-202ENST00000585428 C7orf61Q8IZ16 206 aa17.66■□□□□ 0.42
SDF2-202ENST00000585428 MIGA1Q8NAN2 632 aa17.66■□□□□ 0.42
SDF2-202ENST00000585428 LRCH3Q96II8 777 aa17.66■□□□□ 0.42
SDF2-202ENST00000585428 EHD4Q9H223 541 aa17.66■□□□□ 0.42
SDF2-202ENST00000585428 ANTXR1Q9H6X2 564 aa17.66■□□□□ 0.42
SDF2-202ENST00000585428 SERPINB13Q9UIV8 391 aa17.66■□□□□ 0.42
SDF2-202ENST00000585428 RABGAP1Q9Y3P9 1069 aa17.66■□□□□ 0.42
SDF2-202ENST00000585428 SIPA1L1O43166 1804 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 USP17L15C9J2P7 530 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 USP17L13C9JLJ4 530 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 USP17L11C9JVI0 530 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 USP17L18D6R9N7 530 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 USP17L22D6RA61 530 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 USP17L17D6RBQ6 530 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 USP17L19D6RCP7 530 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 USP17L20D6RJB6 530 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 CNMDO75829 334 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 COL6A1P12109 1028 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 USP17L24Q0WX57 530 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 CCL14Q16627 93 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 CATSPERGQ6ZRH7 1159 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 MAGEB6Q8N7X4 407 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 KIAA1683Q9H0B3 1180 aa17.65■□□□□ 0.42
SDF2-202ENST00000585428 ZMYND8Q9ULU4 1186 aaPredicted RBP17.65■□□□□ 0.42
SDF2-202ENST00000585428 NDUFB9Q9Y6M9 179 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms