RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 DBNDD2Q9BQY9 259 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 PRO3102Q9H379 93 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 GINM1Q9NU53 330 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 MORF4L1Q9UBU8 362 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 DOCK3Q8IZD9 2030 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 FLT1P17948 1338 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 A0A1W2PPC1 479 aa11.84□□□□□ -0.51
CDK5RAP3-227ENST00000583352 C19orf81C9J6K1 198 aa11.84□□□□□ -0.51
CDK5RAP3-227ENST00000583352 BACE1P56817 501 aa11.84□□□□□ -0.51
CDK5RAP3-227ENST00000583352 ATP8B2P98198 1209 aa11.84□□□□□ -0.51
CDK5RAP3-227ENST00000583352 NECAB2Q7Z6G3 386 aa11.84□□□□□ -0.51
CDK5RAP3-227ENST00000583352 ANKLE1Q8NAG6 615 aa11.84□□□□□ -0.51
CDK5RAP3-227ENST00000583352 PAWRQ96IZ0 340 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-227ENST00000583352 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-227ENST00000583352 GJD2Q9UKL4 321 aa11.84□□□□□ -0.51
CDK5RAP3-227ENST00000583352 RPTORQ8N122 1335 aa11.84□□□□□ -0.51
CDK5RAP3-227ENST00000583352 SIPA1L1O43166 1804 aa11.83□□□□□ -0.51
CDK5RAP3-227ENST00000583352 SURF6O75683 361 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-227ENST00000583352 GDF11O95390 407 aa11.83□□□□□ -0.52
CDK5RAP3-227ENST00000583352 CYP2E1P05181 493 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-227ENST00000583352 HLA-DOAP06340 250 aa11.83□□□□□ -0.52
CDK5RAP3-227ENST00000583352 HOXA7P31268 230 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-227ENST00000583352 CENPQQ7L2Z9 268 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-227ENST00000583352 ADGRA1Q86SQ6 560 aa11.83□□□□□ -0.52
CDK5RAP3-227ENST00000583352 SSH3Q8TE77 659 aa11.83□□□□□ -0.52
CDK5RAP3-227ENST00000583352 ZNF512BQ96KM6 892 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-227ENST00000583352 P2RX7Q99572 595 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-227ENST00000583352 DNAJC18Q9H819 358 aa11.83□□□□□ -0.52
CDK5RAP3-227ENST00000583352 FOCADQ5VW36 1801 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 USP17L10C9JJH3 530 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 IGHDP01880 384 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 CYP2B6P20813 491 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 ZAP70P43403 619 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 HERVK_113P62684 666 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 TRIM32Q13049 653 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 METTL16Q86W50 562 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 GPRC5AQ8NFJ5 357 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 DIS3LQ8TF46 1054 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 GTF3C2Q8WUA4 911 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 SOCS4Q8WXH5 440 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 PIH1D3Q9NQM4 214 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 PALD1Q9ULE6 856 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 ZBTB21Q9ULJ3 1066 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 PCDHB15Q9Y5E8 787 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 CDK5RAP2Q96SN8 1893 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 TRIOBPQ9H2D6 2365 aa11.82□□□□□ -0.52
CDK5RAP3-227ENST00000583352 CYP7A1P22680 504 aa11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 MAPK4P31152 587 aa11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 JAG1P78504 1218 aa11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 CCAR1Q8IX12 1150 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 TRMT44Q8IYL2 757 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 C7orf61Q8IZ16 206 aa11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 TRIB2Q92519 343 aa11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 NBPF3Q9H094 633 aa11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 C1orf115Q9H7X2 142 aa11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 TXNRD2Q9NNW7 524 aa11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 STAP2Q9UGK3 403 aa11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 NOP58Q9Y2X3 529 aaKnown RBP11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 PLXNB2O15031 1838 aa11.81□□□□□ -0.52
CDK5RAP3-227ENST00000583352 ALPK3Q96L96 1907 aa11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 IDH1O75874 414 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 XRCC5P13010 732 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 PRKAR2AP13861 404 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 USP5P45974 858 aa11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 DYNLL1P63167 89 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 SHROOM1Q2M3G4 852 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 USP17L2Q6R6M4 530 aa11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 CERS3Q8IU89 383 aa11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 FTSJ3Q8IY81 847 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 C11orf49Q9H6J7 331 aa11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 ZBTB40Q9NUA8 1239 aa11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 RBPJLQ9UBG7 517 aa11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 DBNLQ9UJU6 430 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-227ENST00000583352 CEP290O15078 2479 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 MYO5AQ9Y4I1 1855 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 PEX10O60683 326 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 GH2P01242 217 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 ZKSCAN1P17029 563 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 RGS2P41220 211 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 ERVK-9P63128 1117 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 ERVK-24P63145 666 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 MAP3K21Q5TCX8 1036 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 ITPRIPQ8IWB1 547 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 FEZ1Q99689 392 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 PAGR1Q9BTK6 254 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 CCDC8Q9H0W5 538 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 CWC22Q9HCG8 908 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 EMILIN3Q9NT22 766 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 TLR7Q9NYK1 1049 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 OGDHLQ9ULD0 1010 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 ZMYND8Q9ULU4 1186 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 DDX19BQ9UMR2 479 aa11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 DDX60LQ5H9U9 1706 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-227ENST00000583352 MYH1P12882 1939 aa11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 BMP8BP34820 402 aa11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 Q3C1V9 767 aa11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 GPR142Q7Z601 462 aa11.78□□□□□ -0.52
CDK5RAP3-227ENST00000583352 PLEKHH3Q7Z736 793 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms