RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
TRAF4-214ENST00000580073 MYH7P12883 1935 aa16.33■□□□□ 0.2
TRAF4-214ENST00000580073 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
TRAF4-214ENST00000580073 BACE1P56817 501 aa16.32■□□□□ 0.2
TRAF4-214ENST00000580073 PPP4CP60510 307 aa16.32■□□□□ 0.2
TRAF4-214ENST00000580073 MTMR2Q13614 643 aa16.32■□□□□ 0.2
TRAF4-214ENST00000580073 NECAB2Q7Z6G3 386 aa16.32■□□□□ 0.2
TRAF4-214ENST00000580073 FOXP4Q8IVH2 680 aaPredicted RBP16.32■□□□□ 0.2
TRAF4-214ENST00000580073 CRISPLD2Q9H0B8 497 aa16.32■□□□□ 0.2
TRAF4-214ENST00000580073 MORF4L1Q9UBU8 362 aa16.32■□□□□ 0.2
TRAF4-214ENST00000580073 RPTORQ8N122 1335 aa16.31■□□□□ 0.2
TRAF4-214ENST00000580073 USP17L10C9JJH3 530 aa16.31■□□□□ 0.2
TRAF4-214ENST00000580073 HOXA7P31268 230 aaPredicted RBP16.31■□□□□ 0.2
TRAF4-214ENST00000580073 POLA2Q14181 598 aa16.31■□□□□ 0.2
TRAF4-214ENST00000580073 CCAR1Q8IX12 1150 aaKnown RBP16.31■□□□□ 0.2
TRAF4-214ENST00000580073 SSH3Q8TE77 659 aa16.31■□□□□ 0.2
TRAF4-214ENST00000580073 TGFBRAP1Q8WUH2 860 aa16.31■□□□□ 0.2
TRAF4-214ENST00000580073 HMX1Q9NP08 348 aaPredicted RBP16.31■□□□□ 0.2
TRAF4-214ENST00000580073 RBM27Q9P2N5 1060 aaKnown RBP16.31■□□□□ 0.2
TRAF4-214ENST00000580073 SURF6O75683 361 aaKnown RBP16.3■□□□□ 0.2
TRAF4-214ENST00000580073 SLURP2P0DP57 97 aa16.3■□□□□ 0.2
TRAF4-214ENST00000580073 MAPK4P31152 587 aa16.3■□□□□ 0.2
TRAF4-214ENST00000580073 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
TRAF4-214ENST00000580073 NUDT12Q9BQG2 462 aa16.3■□□□□ 0.2
TRAF4-214ENST00000580073 DBNDD2Q9BQY9 259 aa16.3■□□□□ 0.2
TRAF4-214ENST00000580073 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.3■□□□□ 0.2
TRAF4-214ENST00000580073 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
TRAF4-214ENST00000580073 ATP8B2P98198 1209 aa16.29■□□□□ 0.2
TRAF4-214ENST00000580073 METTL16Q86W50 562 aaKnown RBP16.29■□□□□ 0.2
TRAF4-214ENST00000580073 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
TRAF4-214ENST00000580073 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
TRAF4-214ENST00000580073 GPRC5AQ8NFJ5 357 aa16.29■□□□□ 0.2
TRAF4-214ENST00000580073 CWC22Q9HCG8 908 aaKnown RBP16.29■□□□□ 0.2
TRAF4-214ENST00000580073 SNRKQ9NRH2 765 aa16.29■□□□□ 0.2
TRAF4-214ENST00000580073 ZBTB21Q9ULJ3 1066 aa16.29■□□□□ 0.2
TRAF4-214ENST00000580073 COG6Q9Y2V7 657 aa16.29■□□□□ 0.2
TRAF4-214ENST00000580073 ZNF236Q9UL36 1845 aa16.29■□□□□ 0.2
TRAF4-214ENST00000580073 CYP2E1P05181 493 aaPredicted RBP16.28■□□□□ 0.2
TRAF4-214ENST00000580073 XRCC5P13010 732 aaKnown RBP16.28■□□□□ 0.2
TRAF4-214ENST00000580073 USP14P54578 494 aa16.28■□□□□ 0.2
TRAF4-214ENST00000580073 HERVK_113P62684 666 aa16.28■□□□□ 0.2
TRAF4-214ENST00000580073 FEZ1Q99689 392 aa16.28■□□□□ 0.2
TRAF4-214ENST00000580073 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.2
TRAF4-214ENST00000580073 ZKSCAN1P17029 563 aaPredicted RBP16.27■□□□□ 0.2
TRAF4-214ENST00000580073 USP5P45974 858 aa16.27■□□□□ 0.2
TRAF4-214ENST00000580073 CCNA1P78396 465 aa16.27■□□□□ 0.2
TRAF4-214ENST00000580073 MAP3K12Q12852 859 aa16.27■□□□□ 0.2
TRAF4-214ENST00000580073 USP17L2Q6R6M4 530 aa16.27■□□□□ 0.2
TRAF4-214ENST00000580073 PAWRQ96IZ0 340 aaKnown RBP16.27■□□□□ 0.2
TRAF4-214ENST00000580073 NBPF3Q9H094 633 aa16.27■□□□□ 0.2
TRAF4-214ENST00000580073 EHD4Q9H223 541 aa16.27■□□□□ 0.2
TRAF4-214ENST00000580073 NOP58Q9Y2X3 529 aaKnown RBP16.27■□□□□ 0.2
TRAF4-214ENST00000580073 IDH1O75874 414 aaKnown RBP16.26■□□□□ 0.19
TRAF4-214ENST00000580073 GDF11O95390 407 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 CYP7A1P22680 504 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 RGS2P41220 211 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 ZAP70P43403 619 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 HSP90AB4PQ58FF6 505 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 APBA2Q99767 749 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 PRO3102Q9H379 93 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 C1orf115Q9H7X2 142 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 DNAJC18Q9H819 358 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 SERPINB13Q9UIV8 391 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 PALD1Q9ULE6 856 aa16.26■□□□□ 0.19
TRAF4-214ENST00000580073 A0A0G2JMZ2 1700 aa16.25■□□□□ 0.19
TRAF4-214ENST00000580073 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
TRAF4-214ENST00000580073 ERVK-9P63128 1117 aa16.25■□□□□ 0.19
TRAF4-214ENST00000580073 ERVK-24P63145 666 aa16.25■□□□□ 0.19
TRAF4-214ENST00000580073 RRP1BQ14684 758 aaKnown RBP16.25■□□□□ 0.19
TRAF4-214ENST00000580073 TTF1Q15361 905 aaPredicted RBP16.25■□□□□ 0.19
TRAF4-214ENST00000580073 ADGRA1Q86SQ6 560 aa16.25■□□□□ 0.19
TRAF4-214ENST00000580073 TRIB2Q92519 343 aa16.25■□□□□ 0.19
TRAF4-214ENST00000580073 SAP30BPQ9UHR5 308 aaKnown RBP16.25■□□□□ 0.19
TRAF4-214ENST00000580073 DBNLQ9UJU6 430 aaKnown RBP16.25■□□□□ 0.19
TRAF4-214ENST00000580073 GJD2Q9UKL4 321 aa16.25■□□□□ 0.19
TRAF4-214ENST00000580073 SUPT16HQ9Y5B9 1047 aaKnown RBP16.25■□□□□ 0.19
TRAF4-214ENST00000580073 CYP2B6P20813 491 aa16.24■□□□□ 0.19
TRAF4-214ENST00000580073 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
TRAF4-214ENST00000580073 C11orf49Q9H6J7 331 aa16.24■□□□□ 0.19
TRAF4-214ENST00000580073 CABP5Q9NP86 173 aa16.24■□□□□ 0.19
TRAF4-214ENST00000580073 PIH1D3Q9NQM4 214 aaKnown RBP16.24■□□□□ 0.19
TRAF4-214ENST00000580073 PARP14Q460N5 1801 aa16.24■□□□□ 0.19
TRAF4-214ENST00000580073 GH2P01242 217 aa16.23■□□□□ 0.19
TRAF4-214ENST00000580073 MS4A1P11836 297 aa16.23■□□□□ 0.19
TRAF4-214ENST00000580073 MAP3K21Q5TCX8 1036 aa16.23■□□□□ 0.19
TRAF4-214ENST00000580073 PLEKHH3Q7Z736 793 aa16.23■□□□□ 0.19
TRAF4-214ENST00000580073 C7orf61Q8IZ16 206 aa16.23■□□□□ 0.19
TRAF4-214ENST00000580073 MAGEB6Q8N7X4 407 aa16.23■□□□□ 0.19
TRAF4-214ENST00000580073 P2RX7Q99572 595 aaKnown RBP16.23■□□□□ 0.19
TRAF4-214ENST00000580073 PAGR1Q9BTK6 254 aa16.23■□□□□ 0.19
TRAF4-214ENST00000580073 OGDHLQ9ULD0 1010 aa16.23■□□□□ 0.19
TRAF4-214ENST00000580073 BAZ2AQ9UIF9 1905 aaKnown RBP16.23■□□□□ 0.19
TRAF4-214ENST00000580073 USP17L15C9J2P7 530 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 USP17L13C9JLJ4 530 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 USP17L11C9JVI0 530 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 USP17L18D6R9N7 530 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 USP17L22D6RA61 530 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 USP17L17D6RBQ6 530 aa16.22■□□□□ 0.19
TRAF4-214ENST00000580073 USP17L19D6RCP7 530 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms