RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 SPATA31A1Q5TZJ5 1347 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 SYCE3A1L190 88 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 AKR1B10O60218 316 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 SNX21Q969T3 373 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 CDHR1Q96JP9 859 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 NT5C3AQ9H0P0 336 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 CAMSAP1Q5T5Y3 1602 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 IGSF3O75054 1194 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 TRPC3Q13507 836 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 ZNF354CQ86Y25 554 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 SERPINB13Q9UIV8 391 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 GINS2Q9Y248 185 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 MRVI1Q9Y6F6 885 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 DIP2CQ9Y2E4 1556 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 GSTTP1A0A1W2PQM5 241 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 BIN1O00499 593 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 CHMP2AO43633 222 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 CCNT1O60563 726 aaKnown RBP11.49□□□□□ -0.57
MSI2-209ENST00000579483 PPFIA3O75145 1194 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 DDAH1O94760 285 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 CTDSPL2Q05D32 466 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 LUZP1Q86V48 1076 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 ARHGEF1Q92888 912 aaKnown RBP11.49□□□□□ -0.57
MSI2-209ENST00000579483 ZSCAN10Q96SZ4 725 aaPredicted RBP11.49□□□□□ -0.57
MSI2-209ENST00000579483 EIF3JO75822 258 aaKnown RBP11.49□□□□□ -0.57
MSI2-209ENST00000579483 F13A1P00488 732 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 EPB41P11171 864 aaKnown RBP11.49□□□□□ -0.57
MSI2-209ENST00000579483 CYLC1P35663 651 aaPredicted RBP11.49□□□□□ -0.57
MSI2-209ENST00000579483 ASPRV1Q53RT3 343 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 ZBTB8OSQ8IWT0 167 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 NOX5Q96PH1 765 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 NRBP2Q9NSY0 501 aa11.49□□□□□ -0.57
MSI2-209ENST00000579483 PALM3A6NDB9 673 aaPredicted RBP11.48□□□□□ -0.57
MSI2-209ENST00000579483 NOP2P46087 812 aaKnown RBP11.48□□□□□ -0.57
MSI2-209ENST00000579483 CNNM4Q6P4Q7 775 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 CCDC129Q6ZRS4 1044 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 PLEKHF1Q96S99 279 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 USP25Q9UHP3 1055 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 COMMD10Q9Y6G5 202 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 GAS7O60861 476 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 ZNF165P49910 485 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 KCNQ4P56696 695 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 LRWD1Q9UFC0 647 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 CCPG1Q9ULG6 757 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 ASNSP08243 561 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 MARCKSP29966 332 aaPredicted RBP11.48□□□□□ -0.57
MSI2-209ENST00000579483 BIRC3Q13489 604 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 SUSD4Q5VX71 490 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 FAM160B2Q86V87 743 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 LMBR1Q8WVP7 490 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 KDM3AQ9Y4C1 1321 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 LRRC24Q50LG9 513 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 NCAPH2Q6IBW4 605 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 FAM177A1Q8N128 213 aaPredicted RBP11.48□□□□□ -0.57
MSI2-209ENST00000579483 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
MSI2-209ENST00000579483 CALUO43852 315 aaPredicted RBP11.47□□□□□ -0.57
MSI2-209ENST00000579483 RXRAP19793 462 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 AXDND1Q5T1B0 1012 aaPredicted RBP11.47□□□□□ -0.57
MSI2-209ENST00000579483 PIK3AP1Q6ZUJ8 805 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 MIER3Q7Z3K6 550 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 PNMA1Q8ND90 353 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 AMNQ9BXJ7 453 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 PSTPIP2Q9H939 334 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 RPAP1Q9BWH6 1393 aaPredicted RBP11.47□□□□□ -0.57
MSI2-209ENST00000579483 TMCO5BA8MYB1 307 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 STX10O60499 249 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 TTLL1O95922 423 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 R3HDM1Q15032 1099 aaKnown RBP11.47□□□□□ -0.57
MSI2-209ENST00000579483 SLFN12Q8IYM2 578 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 KIFAP3Q92845 792 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 ADPGKQ9BRR6 497 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 ZNF341Q9BYN7 854 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 GRPEL1Q9HAV7 217 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 TRPC6Q9Y210 931 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 hCG_1984214I3L0E3 225 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 P4HA1P13674 534 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 PHKA1P46020 1223 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 CALCRLQ16602 461 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 TTC38Q5R3I4 469 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 CCDC91Q7Z6B0 441 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 ZNF713Q8N859 430 aaPredicted RBP11.47□□□□□ -0.57
MSI2-209ENST00000579483 ARID3AQ99856 593 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 DCCP43146 1447 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 DIP2AQ14689 1571 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 TESPA1A2RU30 521 aaPredicted RBP11.47□□□□□ -0.57
MSI2-209ENST00000579483 TMEM232C9JQI7 657 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 ELMSAN1Q6PJG2 1045 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 TM6SF1Q9BZW5 370 aa11.47□□□□□ -0.57
MSI2-209ENST00000579483 CYP19A1P11511 503 aaPredicted RBP11.46□□□□□ -0.57
MSI2-209ENST00000579483 SP8Q8IXZ3 490 aa11.46□□□□□ -0.57
MSI2-209ENST00000579483 DIS3L2Q8IYB7 885 aaKnown RBP11.46□□□□□ -0.57
MSI2-209ENST00000579483 ZNF654Q8IZM8 581 aa11.46□□□□□ -0.57
MSI2-209ENST00000579483 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.57
MSI2-209ENST00000579483 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.57
MSI2-209ENST00000579483 CDHR2Q9BYE9 1310 aa11.46□□□□□ -0.57
MSI2-209ENST00000579483 LMAN1P49257 510 aa11.46□□□□□ -0.57
MSI2-209ENST00000579483 ZNF174Q15697 407 aa11.46□□□□□ -0.57
MSI2-209ENST00000579483 FAM47AQ5JRC9 791 aa11.46□□□□□ -0.57
MSI2-209ENST00000579483 SEC31BQ9NQW1 1179 aa11.46□□□□□ -0.57
MSI2-209ENST00000579483 HAUS2Q9NVX0 235 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms