RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 DNAJC18Q9H819 358 aa13.74□□□□□ -0.21
ERBB2-208ENST00000578630 CA12O43570 354 aa13.73□□□□□ -0.21
ERBB2-208ENST00000578630 ALDH1A1P00352 501 aa13.73□□□□□ -0.21
ERBB2-208ENST00000578630 CETPP11597 493 aa13.73□□□□□ -0.21
ERBB2-208ENST00000578630 SHMT1P34896 483 aa13.73□□□□□ -0.21
ERBB2-208ENST00000578630 GJA5P36382 358 aa13.73□□□□□ -0.21
ERBB2-208ENST00000578630 RRP1BQ14684 758 aaKnown RBP13.73□□□□□ -0.21
ERBB2-208ENST00000578630 VPS53Q5VIR6 699 aa13.73□□□□□ -0.21
ERBB2-208ENST00000578630 KIAA1211Q6ZU35 1233 aa13.73□□□□□ -0.21
ERBB2-208ENST00000578630 ZNF589Q86UQ0 364 aaPredicted RBP13.73□□□□□ -0.21
ERBB2-208ENST00000578630 CNKSR2Q8WXI2 1034 aa13.73□□□□□ -0.21
ERBB2-208ENST00000578630 EPB41L4AQ9HCS5 686 aaPredicted RBP13.73□□□□□ -0.21
ERBB2-208ENST00000578630 WBP1LQ9NX94 342 aa13.73□□□□□ -0.21
ERBB2-208ENST00000578630 CTNNA3Q9UI47 895 aa13.73□□□□□ -0.21
ERBB2-208ENST00000578630 RAD50Q92878 1312 aa13.72□□□□□ -0.21
ERBB2-208ENST00000578630 TESPA1A2RU30 521 aaPredicted RBP13.72□□□□□ -0.21
ERBB2-208ENST00000578630 MPHOSPH10O00566 681 aaKnown RBP13.72□□□□□ -0.21
ERBB2-208ENST00000578630 GDF11O95390 407 aa13.72□□□□□ -0.21
ERBB2-208ENST00000578630 GH2P01242 217 aa13.72□□□□□ -0.21
ERBB2-208ENST00000578630 PPARAQ07869 468 aa13.72□□□□□ -0.21
ERBB2-208ENST00000578630 FASTKD5Q7L8L6 764 aaKnown RBP13.72□□□□□ -0.21
ERBB2-208ENST00000578630 ZNF280CQ8ND82 737 aa13.72□□□□□ -0.21
ERBB2-208ENST00000578630 MS4A4AQ96JQ5 239 aa13.72□□□□□ -0.21
ERBB2-208ENST00000578630 DSCC1Q9BVC3 393 aa13.72□□□□□ -0.21
ERBB2-208ENST00000578630 KCNH4Q9UQ05 1017 aa13.72□□□□□ -0.21
ERBB2-208ENST00000578630 AFG3L2Q9Y4W6 797 aa13.72□□□□□ -0.21
ERBB2-208ENST00000578630 MYH1P12882 1939 aa13.72□□□□□ -0.21
ERBB2-208ENST00000578630 CCL15-CCL14A0A0B4J2E2 113 aa13.71□□□□□ -0.21
ERBB2-208ENST00000578630 ZNF213O14771 459 aa13.71□□□□□ -0.21
ERBB2-208ENST00000578630 SPP2Q13103 211 aa13.71□□□□□ -0.21
ERBB2-208ENST00000578630 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.21
ERBB2-208ENST00000578630 CCL15Q16663 113 aa13.71□□□□□ -0.21
ERBB2-208ENST00000578630 TMEM179Q6ZVK1 233 aa13.71□□□□□ -0.21
ERBB2-208ENST00000578630 STK11IPQ8N1F8 1099 aa13.71□□□□□ -0.21
ERBB2-208ENST00000578630 SLC44A5Q8NCS7 719 aa13.71□□□□□ -0.21
ERBB2-208ENST00000578630 WDR18Q9BV38 432 aa13.71□□□□□ -0.21
ERBB2-208ENST00000578630 ZBTB21Q9ULJ3 1066 aa13.71□□□□□ -0.21
ERBB2-208ENST00000578630 TRIM75PA6NK02 468 aa13.7□□□□□ -0.22
ERBB2-208ENST00000578630 C19orf81C9J6K1 198 aa13.7□□□□□ -0.22
ERBB2-208ENST00000578630 SGSM2O43147 1006 aa13.7□□□□□ -0.22
ERBB2-208ENST00000578630 CDC45O75419 566 aa13.7□□□□□ -0.22
ERBB2-208ENST00000578630 EVX2Q03828 476 aa13.7□□□□□ -0.22
ERBB2-208ENST00000578630 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
ERBB2-208ENST00000578630 RNF186Q9NXI6 227 aa13.7□□□□□ -0.22
ERBB2-208ENST00000578630 ANAPC4Q9UJX5 808 aa13.7□□□□□ -0.22
ERBB2-208ENST00000578630 FOCADQ5VW36 1801 aa13.69□□□□□ -0.22
ERBB2-208ENST00000578630 ZMYM6O95789 1325 aa13.69□□□□□ -0.22
ERBB2-208ENST00000578630 USP17L10C9JJH3 530 aa13.69□□□□□ -0.22
ERBB2-208ENST00000578630 FOXP2O15409 715 aa13.69□□□□□ -0.22
ERBB2-208ENST00000578630 TRPA1O75762 1119 aa13.69□□□□□ -0.22
ERBB2-208ENST00000578630 HSPA1AP0DMV8 641 aaKnown RBP13.69□□□□□ -0.22
ERBB2-208ENST00000578630 HSPA1BP0DMV9 641 aaKnown RBP13.69□□□□□ -0.22
ERBB2-208ENST00000578630 IMMTQ16891 758 aaKnown RBP13.69□□□□□ -0.22
ERBB2-208ENST00000578630 BRI3BPQ8WY22 251 aa13.69□□□□□ -0.22
ERBB2-208ENST00000578630 RNF41Q9H4P4 317 aaPredicted RBP13.69□□□□□ -0.22
ERBB2-208ENST00000578630 KANSL2Q9H9L4 492 aa13.69□□□□□ -0.22
ERBB2-208ENST00000578630 SAGE1Q9NXZ1 904 aa13.69□□□□□ -0.22
ERBB2-208ENST00000578630 TMOD4Q9NZQ9 345 aa13.69□□□□□ -0.22
ERBB2-208ENST00000578630 CEP350Q5VT06 3117 aa13.69□□□□□ -0.22
ERBB2-208ENST00000578630 CDK5RAP2Q96SN8 1893 aa13.69□□□□□ -0.22
ERBB2-208ENST00000578630 SMIM22K7EJ46 135 aa13.68□□□□□ -0.22
ERBB2-208ENST00000578630 PCP11498 1178 aaKnown RBP13.68□□□□□ -0.22
ERBB2-208ENST00000578630 AKR1B1P15121 316 aa13.68□□□□□ -0.22
ERBB2-208ENST00000578630 USP14P54578 494 aa13.68□□□□□ -0.22
ERBB2-208ENST00000578630 BACE1P56817 501 aa13.68□□□□□ -0.22
ERBB2-208ENST00000578630 JAG1P78504 1218 aa13.68□□□□□ -0.22
ERBB2-208ENST00000578630 CTDSPL2Q05D32 466 aa13.68□□□□□ -0.22
ERBB2-208ENST00000578630 SEPT2Q15019 361 aa13.68□□□□□ -0.22
ERBB2-208ENST00000578630 MFSD6Q6ZSS7 791 aa13.68□□□□□ -0.22
ERBB2-208ENST00000578630 CCDC84Q86UT8 332 aaPredicted RBP13.68□□□□□ -0.22
ERBB2-208ENST00000578630 ESYT1Q9BSJ8 1104 aa13.68□□□□□ -0.22
ERBB2-208ENST00000578630 ZCCHC17Q9NP64 241 aaKnown RBP13.68□□□□□ -0.22
ERBB2-208ENST00000578630 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
ERBB2-208ENST00000578630 A0A0G2JLL6 359 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-208ENST00000578630 PRDM1O75626 825 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 TSPY3P0CV98 308 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 TSPY8P0CW00 308 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 RASA1P20936 1047 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 CTCFP49711 727 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-208ENST00000578630 NT5C2P49902 561 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 HAND2P61296 217 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.22
ERBB2-208ENST00000578630 SH3D19Q5HYK7 790 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 PPP4R3BQ5MIZ7 849 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 AKNAD1Q5T1N1 836 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 USP17L2Q6R6M4 530 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 GADL1Q6ZQY3 521 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 PRRT2Q7Z6L0 340 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-208ENST00000578630 ANKRD23Q86SG2 305 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 PROCA1Q8NCQ7 364 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-208ENST00000578630 FEZ1Q99689 392 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 PTPN18Q99952 460 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 SH2D4AQ9H788 454 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 ZFYVE28Q9HCC9 887 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 ARHGEF10LQ9HCE6 1279 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 TOMM22Q9NS69 142 aa13.67□□□□□ -0.22
ERBB2-208ENST00000578630 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.67□□□□□ -0.22
ERBB2-208ENST00000578630 BAZ2AQ9UIF9 1905 aaKnown RBP13.66□□□□□ -0.22
ERBB2-208ENST00000578630 TSPY2A6NKD2 308 aa13.66□□□□□ -0.22
ERBB2-208ENST00000578630 BTBD19C9JJ37 291 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms