RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 LAMC3Q9Y6N6 1575 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 SMCO2A6NFE2 343 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 PFDN1O60925 122 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 PTPREP23469 700 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 RINT1Q6NUQ1 792 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 PROCA1Q8NCQ7 364 aaPredicted RBP11.8□□□□□ -0.52
SNX29-205ENST00000566228 SPDYE1Q8NFV5 336 aaPredicted RBP11.8□□□□□ -0.52
SNX29-205ENST00000566228 KCNA4P22459 653 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 DCAF17Q5H9S7 520 aaPredicted RBP11.8□□□□□ -0.52
SNX29-205ENST00000566228 RTL1A6NKG5 1358 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 ZNF263O14978 683 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 TTLL7Q6ZT98 887 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 WWC3Q9ULE0 1092 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 GUCA1BQ9UMX6 200 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 STX1BP61266 288 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 PPP2R1AP30153 589 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 AP1ARQ63HQ0 302 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 NDUFAF2Q8N183 169 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 SLC17A8Q8NDX2 589 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 IFIH1Q9BYX4 1025 aaKnown RBP11.8□□□□□ -0.52
SNX29-205ENST00000566228 IL1RAPL2Q9NP60 686 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 HADHQ16836 314 aaKnown RBP11.8□□□□□ -0.52
SNX29-205ENST00000566228 MPNDQ8N594 471 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 GTF3C6Q969F1 213 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 PRAM1Q96QH2 718 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 SUCLA2Q9P2R7 463 aaPredicted RBP11.8□□□□□ -0.52
SNX29-205ENST00000566228 PIK3R4Q99570 1358 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 NCOA2Q15596 1464 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 GNGT2O14610 69 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 NBPF14Q5TI25 921 aa11.8□□□□□ -0.52
SNX29-205ENST00000566228 OTUB1Q96FW1 271 aaPredicted RBP11.8□□□□□ -0.52
SNX29-205ENST00000566228 N4BP1O75113 896 aaKnown RBP11.79□□□□□ -0.52
SNX29-205ENST00000566228 TMCC1O94876 653 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 AFMP43652 599 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 PPP2R5BQ15173 497 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 ASIC2Q16515 512 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 OTUD6AQ7L8S5 288 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 SPZ1Q9BXG8 430 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 TRIM4Q9C037 500 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 ZC3H12CQ9C0D7 883 aaKnown RBP11.79□□□□□ -0.52
SNX29-205ENST00000566228 OGFRQ9NZT2 677 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 SETD1BQ9UPS6 1966 aaKnown RBP11.79□□□□□ -0.52
SNX29-205ENST00000566228 LRRD1A4D1F6 860 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 PTCD1O75127 700 aaKnown RBP11.79□□□□□ -0.52
SNX29-205ENST00000566228 SERPINB2P05120 415 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 PDE6BP35913 854 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 MED21Q13503 144 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 NAPGQ99747 312 aaPredicted RBP11.79□□□□□ -0.52
SNX29-205ENST00000566228 PRPF6O94906 941 aaKnown RBP11.79□□□□□ -0.52
SNX29-205ENST00000566228 TMTC1Q8IUR5 882 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 TMEM57Q8N5G2 664 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 ANKRD2Q9GZV1 360 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 XPOTO43592 962 aaKnown RBP11.79□□□□□ -0.52
SNX29-205ENST00000566228 TBC1D8O95759 1140 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 KRT9P35527 623 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 TRMT1LQ7Z2T5 733 aaKnown RBP11.79□□□□□ -0.52
SNX29-205ENST00000566228 RNF216Q9NWF9 866 aaPredicted RBP11.79□□□□□ -0.52
SNX29-205ENST00000566228 MID2Q9UJV3 735 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 CCDC61Q9Y6R9 512 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 LRRC43Q8N309 656 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 MRPL40Q9NQ50 206 aaKnown RBP11.79□□□□□ -0.52
SNX29-205ENST00000566228 SKOR1P84550 965 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 APOBRQ0VD83 1088 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 TEX9Q8N6V9 391 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 TRAIPQ9BWF2 469 aa11.79□□□□□ -0.52
SNX29-205ENST00000566228 SKIP12755 728 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 EXOC8Q8IYI6 725 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 TRERF1Q96PN7 1200 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 MYD88Q99836 296 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 TSPOAP1O95153 1857 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 OR9Q1Q8NGQ5 310 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 GIPC2Q8TF65 315 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 SERPINI1Q99574 410 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 ATP6V0A4Q9HBG4 840 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 SLC12A6Q9UHW9 1150 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 SUFUQ9UMX1 484 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 RUSC2Q8N2Y8 1516 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 ERICH3Q5RHP9 1530 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 GTPBP10A4D1E9 387 aaKnown RBP11.78□□□□□ -0.52
SNX29-205ENST00000566228 GOLGA8RI6L899 631 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 MEIS1O00470 390 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 PPP2R5CQ13362 524 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 RAPGEF1Q13905 1077 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 CHMP6Q96FZ7 201 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 SART1O43290 800 aaKnown RBP11.78□□□□□ -0.52
SNX29-205ENST00000566228 KRT4P19013 534 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 KRT81Q14533 505 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 GSDMAQ96QA5 445 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 ZSCAN22P10073 491 aaPredicted RBP11.78□□□□□ -0.52
SNX29-205ENST00000566228 AFAP1Q8N556 730 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 CAPN9O14815 690 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 HPDP32754 393 aaPredicted RBP11.78□□□□□ -0.52
SNX29-205ENST00000566228 WASHC5Q12768 1159 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 SKA2Q8WVK7 121 aaPredicted RBP11.78□□□□□ -0.52
SNX29-205ENST00000566228 ELP1O95163 1332 aa11.78□□□□□ -0.52
SNX29-205ENST00000566228 LONP1P36776 959 aaKnown RBP11.77□□□□□ -0.52
SNX29-205ENST00000566228 KIF22Q14807 665 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms